Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p43040 Brassica napus HOM05D013952 ORTHO05D014536 2.5e-48 196.1 188 100.0
BolC2t10672H Brassica oleracea HOM05D013952 ORTHO05D014536 2.3e-38 162.9 109 77.1
C06p12350 Brassica napus HOM05D013952 ORTHO05D014536 6.4e-36 154.8 118 70.3
C02p46150 Brassica napus HOM05D013952 ORTHO05D014536 9.2e-35 151.0 119 69.7
C04p41730 Brassica napus HOM05D013952 ORTHO05D014536 3.5e-34 149.1 116 70.7
BolC6t36386H Brassica oleracea HOM05D013952 ORTHO05D014536 1.0e-33 147.5 117 69.2
BraA02t08520Z Brassica rapa HOM05D013952 ORTHO05D014536 1.0e-33 147.5 185 92.4
BolC4t25751H Brassica oleracea HOM05D013952 ORTHO05D014536 3.9e-33 145.6 122 65.6
A05p27370 Brassica napus HOM05D013952 ORTHO05D014536 1.8e-30 136.7 89 78.7
BraA07t30688Z Brassica rapa HOM05D013952 ORTHO05D014536 6.6e-17 91.7 50 84.0
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 4.2e-11 72.4 58 63.8
Dinv05527 Davidia involucrata HOM05D000215 ORTHO05D004644 9.3e-11 71.2 97 45.4
Zm00001eb397640 Zea mays HOM05D013952 ORTHO05D014536 2.7e-10 69.7 59 64.4
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 1.0e-09 67.8 55 61.8
BcaB06g28256 Brassica carinata HOM05D000215 ORTHO05D001676 2.3e-09 66.6 57 59.6
SGA_v2.0_scaffold38G15075 Striga asiatica HOM05D000215 ORTHO05D005049 2.3e-09 66.6 47 74.5
A04p34760 Brassica napus HOM05D000001 ORTHO05D002611 1.9e-08 63.5 32 96.9
Actinidia36676 Actinidia chinensis HOM05D000215 ORTHO05D005049 7.4e-08 61.6 36 83.3
A05p18160 Brassica napus HOM05D000001 ORTHO05D002611 1.3e-07 60.8 32 93.8
SGA_v2.0_scaffold39G15157 Striga asiatica HOM05D000215 ORTHO05D005049 1.3e-07 60.8 51 58.8
Medtr1g093965 Medicago truncatula HOM05D000215 ORTHO05D001676 6.2e-07 58.5 58 51.7
Medtr1g093995 Medicago truncatula HOM05D000215 ORTHO05D001676 6.2e-07 58.5 58 51.7
unitig_24.g30593 Utricularia gibba HOM05D000215 ORTHO05D005049 1.4e-06 57.4 39 66.7
SalBow5G3737 Salvia bowleyana HOM05D001760 ORTHO05D001691 5.3e-06 55.5 58 56.9


User provided reference genes

Program Settings