Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p42800 Brassica napus HOM05D021234 ORTHO05D019713 2.7e-158 562.0 293 100.0
BraA03t13427Z Brassica rapa HOM05D021234 ORTHO05D019713 1.5e-148 529.6 277 99.3
C03p52580 Brassica napus HOM05D021234 ORTHO05D019713 1.1e-63 247.7 295 55.3
BcaC01g03441 Brassica carinata HOM05D021234 ORTHO05D019713 9.3e-50 201.4 135 80.7
Sp7g27940 Schrenkiella parvula HOM05D002665 ORTHO05D002991 1.6e-38 164.1 207 51.2
Thhalv10025377m.g Eutrema salsugineum HOM05D002665 ORTHO05D002991 2.8e-38 163.3 207 52.2
AL8G24220 Arabidopsis lyrata HOM05D002665 ORTHO05D019713 6.2e-38 162.2 163 59.5
AL7G22110 Arabidopsis lyrata HOM05D002665 ORTHO05D002991 5.3e-37 159.1 205 52.2
AT4G30090 Arabidopsis thaliana HOM05D002665 ORTHO05D002991 9.0e-37 158.3 207 51.7
Carub.0007s1051 Capsella rubella HOM05D002665 ORTHO05D002991 1.0e-35 154.8 201 49.3
C01p09030 Brassica napus HOM05D002665 ORTHO05D002991 1.1e-34 151.4 199 49.2
BolC1t00893H Brassica oleracea HOM05D002665 ORTHO05D002991 1.1e-34 151.4 199 49.2
BraA01t00750Z Brassica rapa HOM05D002665 ORTHO05D002991 2.5e-34 150.2 199 48.7
A01p08040 Brassica napus HOM05D002665 ORTHO05D002991 1.6e-33 147.5 199 48.2
BcaC09g51786 Brassica carinata HOM05D002665 ORTHO05D020138 1.0e-32 144.8 198 48.0
Thhalv10015505m.g Eutrema salsugineum HOM05D002665 ORTHO05D002991 4.0e-29 132.9 182 47.3
CARHR238000 Cardamine hirsuta HOM05D002665 ORTHO05D002991 5.3e-29 132.5 234 42.7
CARHR258430 Cardamine hirsuta HOM05D021234 ORTHO05D019713 2.0e-28 130.6 153 52.9
BolC3t17526H Brassica oleracea HOM05D021234 ORTHO05D019713 4.5e-28 129.4 84 83.3
Aa31LG2G20480 Aethionema arabicum HOM05D002665 ORTHO05D002991 4.8e-22 109.4 203 39.4
THA.LOC104814666 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 5.9e-12 75.9 222 28.4
Gohir.D05G068300 Gossypium hirsutum HOM05D002665 ORTHO05D002991 2.3e-08 63.9 154 30.5
Gorai.009G069200 Gossypium raimondii HOM05D002665 ORTHO05D002991 2.3e-08 63.9 154 30.5
Gohir.A05G065951 Gossypium hirsutum HOM05D002665 ORTHO05D002991 6.7e-08 62.4 154 29.9
Thecc.09G004300 Theobroma cacao HOM05D002665 ORTHO05D002991 2.6e-07 60.5 162 27.2
Cfa013322 Carpinus fangiana HOM05D002665 ORTHO05D002991 3.3e-07 60.1 152 28.3
Sed0025325 Sechium edule HOM05D002665 ORTHO05D002991 9.7e-07 58.5 115 28.7
AUR62020636 Chenopodium quinoa HOM05D002665 ORTHO05D002991 2.2e-06 57.4 125 28.8
COL.COLO4_18617 Corchorus olitorius HOM05D002665 ORTHO05D002991 2.2e-06 57.4 133 30.1
CSS0018914 Camellia sinensis var. sinensis HOM05D002665 ORTHO05D002991 6.3e-06 55.8 152 28.3


User provided reference genes

Program Settings