Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p42770 Brassica napus HOM05D000384 ORTHO05D006260 2.8e-71 271.9 146 100.0
BraA03t13424Z Brassica rapa HOM05D000384 ORTHO05D006260 3.4e-69 265.0 146 99.3
BcaC01g03444 Brassica carinata HOM05D000384 ORTHO05D006260 1.4e-67 259.6 146 97.3
C03p52530 Brassica napus HOM05D000384 ORTHO05D006260 3.2e-67 258.5 146 96.6
BolC3t17522H Brassica oleracea HOM05D000384 ORTHO05D006260 9.3e-67 256.9 146 95.9
BcaB04g19201 Brassica carinata HOM05D000384 ORTHO05D006260 1.3e-65 253.1 147 95.2
BcaB06g26358 Brassica carinata HOM05D000384 ORTHO05D006260 4.5e-61 238.0 138 92.0
Thhalv10021707m.g Eutrema salsugineum HOM05D000384 ORTHO05D006260 1.7e-60 236.1 143 87.4
CARHR098380 Cardamine hirsuta HOM05D000384 ORTHO05D006260 2.9e-60 235.3 143 88.1
Aa31LG8G9040 Aethionema arabicum HOM05D000384 ORTHO05D006260 1.1e-59 233.4 142 86.6
BcaC05g28063 Brassica carinata HOM05D000384 ORTHO05D006260 1.1e-59 233.4 141 88.7
A05p26280 Brassica napus HOM05D000384 ORTHO05D006260 1.1e-59 233.4 144 85.4
C05p40760 Brassica napus HOM05D000384 ORTHO05D006260 1.1e-59 233.4 141 88.7
BolC5t32821H Brassica oleracea HOM05D000384 ORTHO05D006260 1.1e-59 233.4 141 88.7
AT3G22480 Arabidopsis thaliana HOM05D000384 ORTHO05D006260 4.2e-59 231.5 143 86.7
BraA05t21503Z Brassica rapa HOM05D000384 ORTHO05D006260 4.2e-59 231.5 140 87.1
THA.LOC104822267 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 3.9e-57 224.9 142 83.8
C05p40680 Brassica napus HOM05D000384 ORTHO05D006260 6.7e-57 224.2 141 87.2
BolC5t32807H Brassica oleracea HOM05D000384 ORTHO05D006260 6.7e-57 224.2 141 87.2
THA.LOC104803028 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 8.7e-57 223.8 142 83.8
Carub.0003s2264 Capsella rubella HOM05D000384 ORTHO05D006260 6.2e-55 217.6 143 83.2
AL3G36790 Arabidopsis lyrata HOM05D000384 ORTHO05D006260 5.3e-54 214.5 143 81.8
Sp3g20250 Schrenkiella parvula HOM05D000384 ORTHO05D006260 6.4e-52 207.6 143 80.4
AUR62013951 Chenopodium quinoa HOM05D000384 ORTHO05D006260 2.5e-48 195.7 145 71.7
Gohir.A10G210600 Gossypium hirsutum HOM05D000384 ORTHO05D006260 5.6e-48 194.5 143 73.4
Gohir.D10G218900 Gossypium hirsutum HOM05D000384 ORTHO05D006260 7.4e-48 194.1 142 71.8
Gorai.011G245600 Gossypium raimondii HOM05D000384 ORTHO05D006260 7.4e-48 194.1 142 71.8
AUR62019660 Chenopodium quinoa HOM05D000384 ORTHO05D006260 9.6e-48 193.7 144 71.5
CAN.G1280.23 Capsicum annuum HOM05D000384 ORTHO05D006260 1.6e-47 193.0 139 73.4
Sopen06g018540 Solanum pennellii HOM05D000384 ORTHO05D006260 2.8e-47 192.2 145 69.7
GSVIVG01017982001 Vitis vinifera HOM05D000384 ORTHO05D006260 3.7e-47 191.8 144 72.9
Cpa.g.sc58.101 Carica papaya HOM05D000384 ORTHO05D006260 6.2e-47 191.0 142 71.8
Atru.chr4.2459 Acer truncatum HOM05D000384 ORTHO05D006260 8.2e-47 190.7 141 71.6
Lj3E734T1 Lonicera japonica HOM05D000384 ORTHO05D006260 8.2e-47 190.7 141 70.9
EL10Ac4g08427 Beta vulgaris HOM05D000384 ORTHO05D006260 1.1e-46 190.3 140 72.9
PGSC0003DMG400016332 Solanum tuberosum HOM05D000384 ORTHO05D006260 1.4e-46 189.9 146 69.9
TPR.G25531 Trifolium pratense HOM05D000384 ORTHO05D006260 1.4e-46 189.9 143 73.4
CAN.G136.5 Capsicum annuum HOM05D000384 ORTHO05D006260 1.8e-46 189.5 145 69.0
Cc03_g03830 Coffea canephora HOM05D000384 ORTHO05D006260 1.8e-46 189.5 141 70.9
Oeu031225.1 Olea europaea HOM05D000384 ORTHO05D006260 1.8e-46 189.5 143 71.3
Oeu031229.1 Olea europaea HOM05D000384 ORTHO05D006260 1.8e-46 189.5 143 71.3
Phvul.008G161600 Phaseolus vulgaris HOM05D000384 ORTHO05D006260 1.8e-46 189.5 143 73.4
Glyma.06G316000 Glycine max HOM05D000384 ORTHO05D006260 3.1e-46 188.7 143 72.7
VMungo0720G1921 Vigna mungo HOM05D000384 ORTHO05D006260 3.1e-46 188.7 141 73.0
Glyma.13G124100 Glycine max HOM05D000384 ORTHO05D006260 4.0e-46 188.3 143 72.7
COL.COLO4_10907 Corchorus olitorius HOM05D000384 ORTHO05D006260 1.2e-45 186.8 142 69.0
Medtr3g007250 Medicago truncatula HOM05D000384 ORTHO05D006260 1.2e-45 186.8 143 72.0
QL06p002227 Quercus lobata HOM05D000384 ORTHO05D006260 1.2e-45 186.8 142 71.1
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 1.5e-45 186.4 142 72.5
arahy.Tifrunner.gnm1.ann1.U3DZXE Arachis hypogaea HOM05D000384 ORTHO05D006260 1.5e-45 186.4 142 72.5
Ca_14031_v3 Cicer arietinum L. HOM05D000384 ORTHO05D006260 1.5e-45 186.4 143 72.7
Glyma.05G087300 Glycine max HOM05D000384 ORTHO05D006260 1.5e-45 186.4 143 72.0
Lalb_Chr19g0132471 Lupinus albus HOM05D000384 ORTHO05D006260 1.5e-45 186.4 143 72.7
Psat0s3755g0120 Pisum sativum HOM05D000384 ORTHO05D006260 1.5e-45 186.4 143 72.0
SGA_v2.0_scaffold522G52709 Striga asiatica HOM05D000384 ORTHO05D006260 2.0e-45 186.0 142 70.4
Thecc.10G059100 Theobroma cacao HOM05D000384 ORTHO05D006260 2.0e-45 186.0 140 70.0
CiPaw.02G097700 Carya illinoinensis HOM05D000384 ORTHO05D006260 2.6e-45 185.7 142 71.1
Nitab4.5_0007368g0020 Nicotiana tabacum HOM05D000384 ORTHO05D006260 2.6e-45 185.7 146 69.9
arahy.Tifrunner.gnm1.ann1.K8JXLT Arachis hypogaea HOM05D000384 ORTHO05D006260 3.4e-45 185.3 138 73.9
Lj3g0015206 Lotus japonicus HOM05D000384 ORTHO05D006260 4.5e-45 184.9 147 70.7
Manes.03G178300 Manihot esculenta HOM05D000384 ORTHO05D006260 4.5e-45 184.9 138 71.7
arahy.Tifrunner.gnm1.ann1.T2NEZJ Arachis hypogaea HOM05D000384 ORTHO05D006260 5.8e-45 184.5 142 71.8
Migut.N00188 Erythranthe guttata HOM05D000384 ORTHO05D006260 5.8e-45 184.5 139 71.2
Nitab4.5_0007474g0030 Nicotiana tabacum HOM05D000384 ORTHO05D006260 7.6e-45 184.1 146 68.5
TWI09G1519 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 7.6e-45 184.1 143 68.5
Actinidia40142 Actinidia chinensis HOM05D000384 ORTHO05D006260 1.0e-44 183.7 141 69.5
CSS0003915 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 1.0e-44 183.7 145 66.9
Aqoxy1G01533 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 1.3e-44 183.3 142 69.0
Aqoxy5G00465 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 1.3e-44 183.3 142 69.0
MSTRG.24739 Avicennia marina HOM05D000384 ORTHO05D006260 1.3e-44 183.3 143 68.5
Duzib128G1753 Durio zibethinus HOM05D000384 ORTHO05D006260 1.7e-44 183.0 141 69.5
FvH4_4g15650 Fragaria vesca HOM05D000384 ORTHO05D006260 1.7e-44 183.0 141 69.5
FAN07G0857 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.7e-44 183.0 141 69.5
FAN12G1863 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.7e-44 183.0 141 69.5
Peaxi162Scf00579g00001 Petunia axillaris HOM05D000384 ORTHO05D006260 1.7e-44 183.0 146 67.1
Nn3g18529 Nelumbo nucifera HOM05D000384 ORTHO05D006260 2.2e-44 182.6 139 67.6
RcHm_v2.0_Chr1g0362551 Rosa chinensis HOM05D000384 ORTHO05D006260 2.2e-44 182.6 141 68.8
RcHm_v2.0_Chr4g0387021 Rosa chinensis HOM05D000384 ORTHO05D006260 2.2e-44 182.6 141 68.8
TAR636G3061 Trochodendron aralioides HOM05D000384 ORTHO05D006260 2.2e-44 182.6 143 68.5
unitig_699.g19994 Utricularia gibba HOM05D000384 ORTHO05D006260 2.2e-44 182.6 138 71.0
Atru.chr4.720 Acer truncatum HOM05D000384 ORTHO05D006260 2.9e-44 182.2 141 68.1
CSS0025710 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 2.9e-44 182.2 141 68.1
Cfa015651 Carpinus fangiana HOM05D000384 ORTHO05D006260 2.9e-44 182.2 143 69.2
Ciclev10006154m.g Citrus clementina HOM05D000384 ORTHO05D006260 2.9e-44 182.2 143 68.5
CANSAT64G0565 Cannabis sativa HOM05D000384 ORTHO05D006260 3.8e-44 181.8 144 68.1
MBI11_g07539_MAGBIO Magnolia biondii HOM05D000384 ORTHO05D006260 3.8e-44 181.8 142 67.6
CSS0048526 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 4.9e-44 181.4 141 67.4
Duzib114G0643 Durio zibethinus HOM05D000384 ORTHO05D006260 6.5e-44 181.0 140 68.6
Sc19g0004110 Simmondsia chinensis HOM05D000384 ORTHO05D006260 6.5e-44 181.0 144 66.0
CiPaw.01G166600 Carya illinoinensis HOM05D000384 ORTHO05D006260 8.4e-44 180.6 141 69.5
DCAR_024164 Daucus carota HOM05D000384 ORTHO05D006260 8.4e-44 180.6 140 66.4
SalBow3G1001 Salvia bowleyana HOM05D000384 ORTHO05D006260 8.4e-44 180.6 137 71.5
Hma1.2p1_0745F.1_g212050 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 1.1e-43 180.3 139 68.3
RcHm_v2.0_Chr4g0416141 Rosa chinensis HOM05D000384 ORTHO05D006260 1.1e-43 180.3 138 69.6
Haze_00893 Corylus avellana HOM05D000384 ORTHO05D006260 1.4e-43 179.9 142 68.3
Potri.001G240200 Populus trichocarpa HOM05D000384 ORTHO05D006260 1.4e-43 179.9 142 66.2
Potri.008G153900 Populus trichocarpa HOM05D000384 ORTHO05D006260 1.4e-43 179.9 141 67.4
DCAR_027219 Daucus carota HOM05D000384 ORTHO05D006260 1.9e-43 179.5 140 66.4
Eucgr.H03463 Eucalyptus grandis HOM05D000384 ORTHO05D006260 1.9e-43 179.5 138 71.0
MELO3C022017.2 Cucumis melo HOM05D000384 ORTHO05D006260 2.5e-43 179.1 141 68.1
FAN17G0123 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.5e-43 179.1 141 68.1
FAN22G1586 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.5e-43 179.1 141 67.4
Sc13g0004430 Simmondsia chinensis HOM05D000384 ORTHO05D006260 3.2e-43 178.7 140 67.1
PSO210G4801 Papaver somniferum HOM05D000384 ORTHO05D006260 4.2e-43 178.3 138 67.4
Sabra16G0144900 Salix brachista HOM05D000384 ORTHO05D006260 4.2e-43 178.3 143 65.7
Os12g0485800 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 5.5e-43 177.9 138 69.6
Sabra08G0117400 Salix brachista HOM05D000384 ORTHO05D006260 5.5e-43 177.9 141 67.4
Dinv44537 Davidia involucrata HOM05D000384 ORTHO05D000468 7.1e-43 177.6 138 68.1
Os11g0568500 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 7.1e-43 177.6 137 67.2
PSO832G3877 Papaver somniferum HOM05D000384 ORTHO05D006260 9.3e-43 177.2 138 67.4
Rhsim04G0201900 Rhododendron simsii HOM05D000384 ORTHO05D006260 9.3e-43 177.2 142 65.5
ClCG05G005160 Citrullus lanatus HOM05D000384 ORTHO05D006260 1.2e-42 176.8 141 68.1
TWI53G0398 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 1.2e-42 176.8 143 66.4
Hund25029 Selenicereus undatus HOM05D000384 ORTHO05D006260 2.1e-42 176.0 144 66.7
CsaV3_5G038350 Cucumis sativus L. HOM05D000384 ORTHO05D006260 2.7e-42 175.6 141 67.4
Oeu050282.1 Olea europaea HOM05D000384 ORTHO05D006260 3.5e-42 175.3 143 67.1
Sed0018578 Sechium edule HOM05D000384 ORTHO05D006260 4.6e-42 174.9 138 67.4
MD16G1194400 Malus domestica HOM05D000384 ORTHO05D006260 6.0e-42 174.5 140 67.9
Zm00001eb114150 Zea mays HOM05D000384 ORTHO05D006260 6.0e-42 174.5 137 66.4
Prupe.1G014300 Prunus persica HOM05D000384 ORTHO05D006260 1.0e-41 173.7 143 66.4
PGR004G2612 Punica granatum HOM05D000384 ORTHO05D006260 2.3e-41 172.6 139 66.2
Solyc06g053460.3 Solanum lycopersicum HOM05D000384 ORTHO05D006260 2.3e-41 172.6 127 71.7
Zm00001eb415970 Zea mays HOM05D000384 ORTHO05D006260 3.0e-41 172.2 137 65.7
HanXRQChr08g0229211 Helianthus annuus HOM05D000384 ORTHO05D006260 3.9e-41 171.8 138 66.7
Lsat_1_v5_gn_9_18461 Lactuca sativa HOM05D000384 ORTHO05D006260 3.9e-41 171.8 142 65.5
ECA247G4089 Erigeron canadensis HOM05D000384 ORTHO05D006260 5.1e-41 171.4 139 66.9
SEGI_35673 Sequoiadendron giganteum HOM05D000384 ORTHO05D006260 1.1e-38 163.7 141 63.8
ATR0083G069 Amborella trichopoda HOM05D000384 ORTHO05D006260 6.5e-36 154.5 143 59.4
HanXRQChr04g0103741 Helianthus annuus HOM05D000384 ORTHO05D006260 9.4e-35 150.6 119 66.4
AagrBONN_evm.TU.Sc2ySwM_344.1360 Anthoceros agrestis HOM05D000384 ORTHO05D006260 1.2e-34 150.2 139 55.4
TAR365G0396 Trochodendron aralioides HOM05D000384 ORTHO05D006260 3.6e-34 148.7 111 68.5
Mapoly0049s0105 Marchantia polymorpha HOM05D000384 ORTHO05D006260 4.6e-34 148.3 133 60.2
SMO169G0080 Selaginella moellendorffii HOM05D000384 ORTHO05D006260 1.4e-33 146.7 138 53.6
Ah.04g163960 Amaranthus hybridus HOM05D000384 ORTHO05D006260 3.0e-33 145.6 140 61.4
CBR_g42063 Chara braunii HOM05D000384 ORTHO05D006260 9.1e-30 134.0 145 50.3
BcaC05g28047 Brassica carinata HOM05D000384 ORTHO05D006260 4.5e-29 131.7 97 74.2
HPP92_018608 Vanilla planifolia HOM05D000384 ORTHO05D006260 1.3e-28 130.2 133 55.6
Pp3c23_10300 Physcomitrium patens HOM05D000384 ORTHO05D006260 2.9e-28 129.0 136 54.4
AagrBONN_evm.TU.Sc2ySwM_228.3583 Anthoceros agrestis HOM05D000384 ORTHO05D006260 5.0e-28 128.3 107 57.0
Pp3c24_3120 Physcomitrium patens HOM05D000384 ORTHO05D006260 1.3e-23 113.6 137 48.9
MCO05G108 Micromonas commoda HOM05D000384 ORTHO05D006260 1.1e-19 100.5 129 41.9
HPP92_018610 Vanilla planifolia HOM05D000384 ORTHO05D006260 1.1e-19 100.5 77 66.2
Cre07.g342250 Chlamydomonas reinhardtii HOM05D000384 ORTHO05D006260 3.2e-19 99.0 138 39.9
Hma1.2p1_0602F.1_g187390 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 2.2e-15 86.3 52 76.9
PRCOL_00004688 Prasinoderma coloniale HOM05D000384 ORTHO05D006260 3.5e-13 79.0 89 49.4
CDE09G0159 Ceratophyllum demersum HOM05D000384 ORTHO05D006260 8.0e-10 67.8 46 69.6


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