Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.8e-70 268.5 135 100.0
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.9e-67 258.5 140 93.6
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.5e-66 256.1 140 93.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 3.3e-66 255.0 140 94.3
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 9.5e-66 253.4 141 93.6
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 3.4e-63 245.0 140 90.7
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.3e-62 243.0 140 89.3
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.7e-62 242.7 140 88.6
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.2e-62 242.3 140 87.9
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.2e-62 242.3 140 87.9
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.2e-62 242.3 140 87.9
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.1e-61 240.0 140 87.9
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 2.4e-61 238.8 140 86.4
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 9.8e-55 216.9 141 82.3
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.7e-54 216.1 141 81.6
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.7e-54 216.1 141 81.6
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 3.7e-54 214.9 141 81.6
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.1e-48 196.8 135 75.6
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 4.1e-45 184.9 133 69.9
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.1e-42 176.8 137 65.0
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 5.6e-42 174.5 133 63.2
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 9.5e-42 173.7 135 65.9
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 3.6e-41 171.8 135 63.7
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 6.2e-41 171.0 135 66.7
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.8e-40 169.5 115 73.0
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 2.3e-40 169.1 127 65.4
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 3.1e-40 168.7 132 64.4
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 3.1e-40 168.7 127 67.7
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 5.2e-40 167.9 131 64.1
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 6.8e-40 167.5 130 61.5
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 8.9e-40 167.2 127 66.9
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.2e-39 166.8 131 63.4
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.0e-39 166.0 130 65.4
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.0e-39 166.0 130 65.4
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 2.0e-39 166.0 130 65.4
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.6e-39 165.6 131 63.4
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 3.4e-39 165.2 127 66.1
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 3.4e-39 165.2 127 66.9
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 3.4e-39 165.2 132 63.6
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 5.8e-39 164.5 126 65.1
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 9.9e-39 163.7 133 60.2
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 4.9e-38 161.4 127 63.0
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 8.4e-38 160.6 127 63.8
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 8.4e-38 160.6 128 59.4
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.1e-37 160.2 137 61.3
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.1e-37 160.2 131 61.1
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.1e-37 160.2 126 61.9
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.4e-37 159.8 127 61.4
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.9e-37 159.5 130 63.1
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 1.9e-37 159.5 133 62.4
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.4e-37 159.1 117 66.7
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 3.2e-37 158.7 131 62.6
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 5.4e-37 157.9 114 67.5
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 5.4e-37 157.9 129 63.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 5.4e-37 157.9 132 59.1
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 7.1e-37 157.5 126 59.5
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.2e-36 156.8 126 65.1
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 1.2e-36 156.8 129 62.8
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.6e-36 156.4 125 60.8
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.6e-36 156.4 108 71.3
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.1e-36 156.0 126 60.3
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.7e-36 155.6 132 59.8
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 2.7e-36 155.6 133 60.2
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.7e-36 155.6 114 65.8
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.7e-36 155.6 135 59.3
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 2.7e-36 155.6 127 62.2
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 2.7e-36 155.6 131 59.5
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 3.5e-36 155.2 131 58.8
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.5e-36 155.2 127 62.2
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.5e-36 155.2 132 62.9
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 4.6e-36 154.8 108 69.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 4.6e-36 154.8 102 69.6
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 6.0e-36 154.5 123 61.0
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.0e-36 154.5 125 57.6
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 6.0e-36 154.5 125 57.6
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 7.8e-36 154.1 120 63.3
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.0e-35 153.7 113 64.6
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.0e-35 153.7 129 60.5
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.3e-35 153.3 102 70.6
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 1.3e-35 153.3 100 70.0
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.7e-35 152.9 132 60.6
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.7e-35 152.9 126 58.7
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.7e-35 152.9 126 59.5
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.3e-35 152.5 124 59.7
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.1e-35 151.4 135 57.0
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 6.6e-35 151.0 132 60.6
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 1.1e-34 150.2 120 60.8
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 1.5e-34 149.8 121 60.3
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 1.5e-34 149.8 131 59.5
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.5e-34 149.8 132 54.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.5e-34 149.8 108 64.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.9e-34 149.4 125 61.6
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 2.5e-34 149.1 108 64.8
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.5e-34 149.1 117 61.5
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 2.5e-34 149.1 98 72.4
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 4.3e-34 148.3 108 65.7
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 5.6e-34 147.9 126 61.1
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 9.6e-34 147.1 108 63.0
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.1e-33 146.0 126 57.1
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 2.8e-33 145.6 108 63.0
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.8e-33 145.6 108 61.1
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 1.1e-32 143.7 108 63.0
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 5.2e-32 141.4 119 58.0
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 2.6e-31 139.0 135 53.3
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.8e-31 137.9 182 42.9
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 8.4e-30 134.0 173 45.1
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.9e-29 132.9 87 72.4
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 4.2e-29 131.7 137 53.3
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 7.1e-29 131.0 116 57.8
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 1.2e-28 130.2 114 62.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 2.7e-28 129.0 84 71.4
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 4.6e-28 128.3 128 52.3
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.0e-28 127.9 130 52.3
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 7.8e-28 127.5 110 57.3
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.6e-25 119.8 86 64.0
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 4.5e-23 111.7 97 51.5
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 9.9e-23 110.5 100 51.0
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.9e-23 110.5 83 63.9
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.1e-21 107.1 61 77.0
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 2.1e-20 102.8 100 47.0
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.3e-19 100.1 77 59.7
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 2.3e-19 99.4 97 48.5
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 2.3e-19 99.4 62 67.7
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 9.6e-18 94.0 67 62.7
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.1e-17 92.8 126 42.9
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 5.8e-15 84.7 68 52.9
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.4e-13 80.1 49 75.5
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 9.3e-13 77.4 91 50.5
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.0e-11 72.4 70 54.3
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 3.0e-11 72.4 67 56.7
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 5.1e-11 71.6 57 52.6
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 8.7e-11 70.9 64 54.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 4.3e-10 68.6 65 56.9
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.1e-09 66.2 44 59.1
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 5.3e-08 61.6 61 54.1
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 3.4e-07 58.9 96 35.4
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.2e-06 56.2 66 40.9
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 6.5e-06 54.7 101 27.7


User provided reference genes

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