Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p39790 Brassica napus HOM05D003473 ORTHO05D003872 6.0e-85 317.4 152 100.0
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 9.3e-78 293.5 152 91.4
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 1.2e-77 293.1 151 91.4
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 1.2e-77 293.1 151 91.4
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 7.9e-77 290.4 151 90.1
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 5.1e-76 287.7 152 89.5
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 6.7e-76 287.3 152 88.8
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 4.8e-74 281.2 152 86.2
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 1.4e-73 279.6 153 86.3
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 1.8e-73 279.3 152 85.5
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 5.3e-73 277.7 152 84.9
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 6.9e-73 277.3 152 84.9
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 6.9e-73 277.3 152 84.9
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 9.0e-73 276.9 152 84.2
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 9.0e-73 276.9 152 84.2
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 2.6e-72 275.4 152 84.9
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 4.5e-72 274.6 152 82.9
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 4.5e-72 274.6 152 82.9
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 5.8e-72 274.2 152 82.9
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 1.0e-71 273.5 152 82.9
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 2.2e-71 272.3 152 82.2
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 8.4e-71 270.4 152 83.6
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 9.6e-67 256.9 153 79.1
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 1.6e-66 256.1 152 77.6
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 2.8e-66 255.4 150 79.3
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 3.7e-66 255.0 151 76.8
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 8.2e-66 253.8 152 75.7
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 8.2e-66 253.8 152 76.3
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 1.8e-65 252.7 152 75.7
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 2.4e-65 252.3 152 75.7
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 3.1e-65 251.9 152 75.0
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 3.1e-65 251.9 152 75.0
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 3.1e-65 251.9 152 75.0
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 3.1e-65 251.9 152 77.0
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 4.1e-65 251.5 152 75.0
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 4.1e-65 251.5 152 74.3
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 5.3e-65 251.1 152 75.7
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 6.9e-65 250.8 152 77.6
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 6.9e-65 250.8 152 75.0
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 6.9e-65 250.8 152 75.0
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.5e-64 249.6 152 74.3
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 1.5e-64 249.6 152 75.7
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 2.0e-64 249.2 152 75.7
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 2.0e-64 249.2 152 74.3
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 2.6e-64 248.8 152 76.3
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.6e-64 248.8 152 73.7
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 2.6e-64 248.8 152 75.0
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.4e-64 248.4 152 73.7
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 3.4e-64 248.4 152 75.7
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 3.4e-64 248.4 153 75.8
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 5.9e-64 247.7 152 75.0
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 5.9e-64 247.7 152 72.4
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 5.9e-64 247.7 153 76.5
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 1.0e-63 246.9 152 74.3
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 1.0e-63 246.9 152 71.7
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 1.0e-63 246.9 152 73.7
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 1.0e-63 246.9 152 75.0
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.3e-63 246.5 152 73.7
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 1.3e-63 246.5 152 73.7
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 1.3e-63 246.5 152 73.0
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 1.7e-63 246.1 152 74.3
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 2.2e-63 245.7 152 75.0
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.2e-63 245.7 152 73.0
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 2.9e-63 245.4 152 73.0
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 3.8e-63 245.0 152 73.0
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 3.8e-63 245.0 152 73.0
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 3.8e-63 245.0 152 73.7
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 3.8e-63 245.0 152 72.4
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 3.8e-63 245.0 152 73.0
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 5.0e-63 244.6 152 73.0
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 8.5e-63 243.8 152 72.4
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 1.9e-62 242.7 152 71.7
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 1.9e-62 242.7 152 72.4
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.2e-62 241.9 150 72.7
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 3.2e-62 241.9 152 73.0
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 3.2e-62 241.9 152 73.7
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 3.2e-62 241.9 152 73.7
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 3.2e-62 241.9 152 70.4
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 5.5e-62 241.1 153 71.9
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 5.5e-62 241.1 153 71.9
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 5.5e-62 241.1 152 71.1
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 5.5e-62 241.1 153 71.9
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 7.2e-62 240.7 152 74.3
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 9.3e-62 240.4 154 72.1
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 1.2e-61 240.0 152 71.7
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 1.2e-61 240.0 153 71.2
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.2e-61 240.0 152 70.4
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 2.7e-61 238.8 152 69.7
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 2.7e-61 238.8 152 71.7
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 2.7e-61 238.8 154 71.4
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.6e-61 238.4 154 71.4
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 3.6e-61 238.4 152 70.4
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 3.6e-61 238.4 152 71.7
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 4.6e-61 238.0 152 71.7
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 6.1e-61 237.7 152 71.7
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 7.9e-61 237.3 152 71.1
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 1.0e-60 236.9 152 70.4
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.3e-60 236.5 152 71.7
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 1.3e-60 236.5 152 69.7
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 1.3e-60 236.5 152 69.7
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 1.3e-60 236.5 153 68.6
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 1.8e-60 236.1 152 71.7
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.3e-60 235.7 150 70.0
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.3e-60 235.7 152 69.1
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 3.9e-60 235.0 152 71.1
unitig_749.g14016 Utricularia gibba HOM05D003473 ORTHO05D003872 3.9e-60 235.0 152 69.7
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 5.1e-60 234.6 154 70.8
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 1.1e-59 233.4 153 68.0
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 1.5e-59 233.0 153 68.6
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 1.9e-59 232.6 154 69.5
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 2.5e-59 232.3 152 69.1
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 4.3e-59 231.5 154 69.5
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 4.3e-59 231.5 153 67.3
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 5.7e-59 231.1 153 68.0
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 7.4e-59 230.7 153 69.3
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 7.4e-59 230.7 167 65.3
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 7.4e-59 230.7 153 68.0
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 9.7e-59 230.3 153 68.0
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 1.3e-58 229.9 153 68.0
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 1.6e-58 229.6 154 68.2
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 2.8e-58 228.8 176 61.4
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 2.4e-57 225.7 153 66.0
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 2.4e-57 225.7 152 68.4
SEGI_25367 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 4.1e-57 224.9 152 65.1
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.0e-56 222.6 152 65.8
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 5.9e-56 221.1 144 70.1
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 7.7e-56 220.7 152 65.8
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 1.7e-55 219.5 184 58.2
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.2e-55 219.2 152 64.5
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 2.9e-55 218.8 149 69.8
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 3.2e-54 215.3 133 77.4
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.0e-52 208.8 151 63.6
MBI07_g26633_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 3.9e-52 208.4 152 64.5
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.3e-51 205.3 153 64.1
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.3e-51 205.3 153 64.1
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 4.4e-51 204.9 170 57.6
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.3e-50 201.1 152 60.5
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.8e-49 199.5 151 58.3
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 4.1e-49 198.4 152 58.6
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 4.1e-49 198.4 129 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 6.9e-49 197.6 152 57.2
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.2e-48 196.8 151 57.0
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 6.5e-47 191.0 152 53.9
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 5.5e-46 188.0 152 57.9
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 1.8e-44 183.0 151 54.3
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.4e-43 178.3 146 55.5
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.2e-42 176.0 146 52.1
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.4e-41 172.6 146 51.4
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.3e-41 171.4 124 65.3
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-40 170.2 148 50.7
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.6e-40 169.9 146 50.0
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.5e-40 168.3 146 52.1
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.7e-39 166.4 146 52.1
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.4e-38 160.6 141 51.8
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.4e-36 156.8 146 47.9
DCAR_030014 Daucus carota HOM05D003473 ORTHO05D003872 1.8e-36 156.4 96 75.0
Atru.chr2.997 Acer truncatum HOM05D003473 ORTHO05D003872 2.6e-35 152.5 95 75.8
RhsimUnG0155700 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.6e-35 152.5 98 71.4
BcaNung02115 Brassica carinata HOM05D003473 ORTHO05D003872 3.3e-35 152.1 73 95.9
C07p40070 Brassica napus HOM05D003473 ORTHO05D003872 3.3e-35 152.1 73 95.9
BolC7t44543H Brassica oleracea HOM05D003473 ORTHO05D003872 3.3e-35 152.1 73 95.9
AagrBONN_evm.TU.Sc2ySwM_228.1749 Anthoceros agrestis HOM05D003473 ORTHO05D003872 4.4e-35 151.8 122 56.6
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.3e-34 150.2 143 45.5
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 6.3e-34 147.9 107 63.6
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 5.3e-33 144.8 140 52.9
SMO235G0055 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-32 143.7 126 50.8
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 6.5e-31 137.9 103 59.2
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.8e-28 129.8 112 52.7
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.5e-27 126.7 146 42.5
SMO241G0018 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.4e-27 125.2 143 40.6
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 8.5e-23 110.9 157 39.5
CBR_g40386 Chara braunii HOM05D003473 ORTHO05D003872 1.0e-20 104.0 154 37.0
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 2.3e-20 102.8 59 72.9
CBR_g48364 Chara braunii HOM05D003473 ORTHO05D003872 2.6e-19 99.4 150 35.3
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 1.3e-18 97.1 56 73.2
SGA_v2.0_scaffold90G27648 Striga asiatica HOM05D003473 ORTHO05D003872 4.9e-18 95.1 131 41.2
CBR_g48367 Chara braunii HOM05D003473 ORTHO05D003872 8.3e-18 94.4 154 33.1
CBR_g23900 Chara braunii HOM05D003473 ORTHO05D003872 4.1e-17 92.0 156 31.4
C07p40080 Brassica napus HOM05D003473 ORTHO05D003872 4.5e-16 88.6 43 93.0
BolC7t44544H Brassica oleracea HOM05D003473 ORTHO05D003872 4.5e-16 88.6 43 93.0
SMO241G0005 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.6e-15 84.3 91 46.2
HPP92_028131 Vanilla planifolia HOM05D003473 ORTHO05D003872 1.7e-07 60.1 36 69.4
SMO347G0649 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.6e-07 58.2 45 55.6
Pp3c10_1400 Physcomitrium patens HOM05D022126 ORTHO05D003872 1.5e-06 57.0 140 27.9


User provided reference genes

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