Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 3568.1 1807 100.0
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 0.0e+00 3564.6 1807 99.9
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 3518.8 1807 98.6
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 0.0e+00 3515.3 1810 98.3
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 3511.9 1809 98.5
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 3484.1 1810 97.3
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 0.0e+00 3376.3 1810 94.0
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 0.0e+00 3354.3 1810 93.8
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 0.0e+00 3337.4 1812 92.9
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 0.0e+00 3333.1 1810 92.8
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 0.0e+00 3308.9 1812 92.3
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 0.0e+00 3284.6 1811 91.4
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 0.0e+00 3203.7 1809 89.1
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 0.0e+00 3026.5 1810 84.0
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 0.0e+00 2770.0 1819 76.0
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 0.0e+00 2699.1 1805 74.3
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 0.0e+00 2687.5 1818 74.1
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 0.0e+00 2681.7 1818 73.6
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 0.0e+00 2678.3 1825 73.7
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 0.0e+00 2677.9 1818 74.0
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 0.0e+00 2674.8 1767 75.7
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 0.0e+00 2673.7 1824 73.9
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2672.1 1822 73.0
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 0.0e+00 2671.3 1822 73.9
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2667.5 1820 73.3
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2664.0 1820 73.4
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2659.0 1820 73.2
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2658.6 1820 73.1
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2656.7 1818 73.4
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2655.6 1820 73.0
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 2650.9 1820 72.6
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 0.0e+00 2641.7 1819 72.6
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 0.0e+00 2640.5 1816 72.2
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2635.9 1808 73.1
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2631.7 1818 72.4
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 0.0e+00 2625.9 1831 71.8
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 0.0e+00 2621.3 1819 72.5
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 0.0e+00 2608.6 1820 71.8
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 0.0e+00 2602.0 1836 71.6
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2596.2 1772 73.3
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 0.0e+00 2588.1 1821 72.4
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 0.0e+00 2587.4 1817 71.5
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 0.0e+00 2576.2 1821 70.1
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 0.0e+00 2574.7 1975 67.0
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 0.0e+00 2563.5 1822 70.3
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 0.0e+00 2562.7 1930 68.3
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2560.4 1860 70.5
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2559.6 1822 70.0
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2559.6 1818 70.1
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2558.1 1821 69.8
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2557.7 1821 69.7
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 0.0e+00 2550.4 1815 70.7
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 0.0e+00 2549.6 1818 70.2
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2545.0 1822 69.9
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 0.0e+00 2543.5 1757 72.3
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2542.7 1823 69.6
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 0.0e+00 2540.0 1816 70.5
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2536.9 1821 69.1
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 0.0e+00 2535.0 1817 69.7
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 0.0e+00 2531.5 1817 69.6
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 0.0e+00 2530.4 1813 69.5
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 0.0e+00 2529.2 1828 70.0
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 0.0e+00 2526.5 1818 69.1
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 0.0e+00 2508.8 1816 69.8
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2502.6 1676 75.1
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 0.0e+00 2494.2 1820 68.0
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 0.0e+00 2491.1 1824 68.8
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2490.3 1903 66.1
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 0.0e+00 2488.0 1818 68.4
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 0.0e+00 2477.6 1816 68.0
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 0.0e+00 2476.4 1770 70.5
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2473.7 1814 68.1
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 0.0e+00 2463.7 1810 68.6
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2463.3 1823 68.0
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2461.4 1835 67.4
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2461.0 1813 68.3
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2443.7 1803 68.4
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 0.0e+00 2443.3 1820 67.0
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2434.1 1818 67.4
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2425.2 1844 66.5
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 0.0e+00 2417.1 1891 65.8
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 0.0e+00 2382.8 1833 66.8
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 0.0e+00 2376.7 1792 67.9
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2361.3 1824 65.4
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2359.3 1946 62.9
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2343.9 1857 64.1
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 0.0e+00 2340.5 1838 64.5
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 0.0e+00 2339.3 1815 65.7
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 0.0e+00 2335.8 1817 65.3
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2316.2 1908 63.7
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 0.0e+00 2275.0 1828 62.9
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 0.0e+00 2274.2 1625 70.8
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 0.0e+00 2268.8 1821 62.5
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2229.1 1652 69.1
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2214.9 1566 72.4
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 0.0e+00 2107.4 1742 64.2
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2105.9 1681 64.0
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 2084.7 1517 68.4
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 0.0e+00 2066.2 1824 57.4
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2046.9 1444 69.7
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 0.0e+00 1755.7 1450 62.9
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 1748.8 1251 70.6
Potri.011G167700 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 1708.0 1148 73.2
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 0.0e+00 1652.5 1815 50.7
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1386.7 1934 41.2
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 0.0e+00 1379.4 1862 42.3
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1372.8 1852 41.7
PGSC0003DMG401022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 0.0e+00 1370.9 945 70.9
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1324.7 1879 39.8
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1206.0 1838 38.4
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1189.5 1859 38.0
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1167.1 1836 37.4
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1153.3 863 68.7
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 2.7e-309 1066.2 1842 35.3
CAN.G623.64 Capsicum annuum HOM05D004535 ORTHO05D005341 1.2e-293 1014.2 946 58.6
Ca_14861_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 4.8e-290 1002.3 723 68.0
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 7.7e-272 941.8 1969 32.6
Os06g0301300 Oryza sativa ssp. japonica HOM05D004535 ORTHO05D005341 1.3e-250 871.3 693 60.6
COL.COLO4_07778 Corchorus olitorius HOM05D004535 ORTHO05D005341 7.0e-249 865.5 1169 46.4
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 2.2e-202 711.1 505 70.9
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.3e-162 578.9 623 54.6
SEGI_13123 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.8e-136 491.5 459 54.5
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 9.2e-132 476.5 637 45.4
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 3.5e-123 448.0 1905 24.9
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 2.3e-122 445.3 337 67.7
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 4.4e-110 404.4 466 47.4
VMungo0540G1109 Vigna mungo HOM05D004535 ORTHO05D005341 5.8e-110 404.1 320 65.3
Actinidia00827 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.7e-101 375.9 301 61.5
MD00G1206600 Malus domestica HOM05D004535 ORTHO05D005341 6.4e-101 374.0 220 75.5
VMungo1127G2045 Vigna mungo HOM05D004535 ORTHO05D005341 1.8e-98 365.9 269 66.9
MD00G1206500 Malus domestica HOM05D004535 ORTHO05D005341 2.2e-93 349.0 250 72.8
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 1.5e-81 309.7 1683 23.8
SEGI_32129 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 7.4e-81 307.4 359 51.8
Actinidia03668 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.1e-76 293.5 225 60.4
Nn1g08306 Nelumbo nucifera HOM05D004535 ORTHO05D005341 4.1e-71 275.0 166 74.1
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea HOM05D004535 ORTHO05D005341 3.2e-68 265.4 345 47.2
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 2.8e-40 172.6 100 87.0
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.5e-36 159.5 138 62.3
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 8.0e-35 154.5 1986 19.3
Actinidia00828 Actinidia chinensis HOM05D004535 ORTHO05D005341 4.0e-34 152.1 210 44.8
Cre14.g628702 Chlamydomonas reinhardtii HOM05D004535 ORTHO05D005341 5.2e-34 151.8 1332 20.7
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 8.6e-21 107.8 106 60.4
PSO541G1144 Papaver somniferum HOM05D004535 ORTHO05D005341 3.3e-20 105.9 76 64.5
Psat5g106440 Pisum sativum HOM05D004535 ORTHO05D005341 3.3e-20 105.9 65 83.1
Ca_31034_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 5.6e-20 105.1 75 69.3
Lsat_1_v5_gn_0_5420 Lactuca sativa HOM05D004535 ORTHO05D005341 4.0e-18 99.0 76 55.3
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 2.0e-17 96.7 121 50.4
VMungo1215G1327 Vigna mungo HOM05D004535 ORTHO05D005341 1.7e-16 93.6 60 81.7
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 2.9e-16 92.8 111 53.2
PGSC0003DMG402022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 1.1e-15 90.9 96 50.0
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 3.5e-14 85.9 71 63.4
SEGI_18126 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.3e-10 73.2 84 35.7
Psat4g112520 Pisum sativum HOM05D004535 ORTHO05D005341 6.8e-10 71.6 45 66.7
VMungo0110G0001 Vigna mungo HOM05D004535 ORTHO05D005341 3.4e-09 69.3 68 51.5
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 1.4e-07 63.9 78 52.6
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 9.2e-07 61.2 75 50.7


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