Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.4e-14 81.6 38 100.0
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 5.3e-14 79.7 36 100.0
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 2.0e-13 77.8 36 97.2
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 2.0e-13 77.8 36 97.2
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 2.0e-13 77.8 36 97.2
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 5.8e-13 76.3 36 94.4
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 5.8e-13 76.3 36 94.4
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 7.6e-13 75.9 36 94.4
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 7.6e-13 75.9 36 91.7
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 1.3e-12 75.1 36 91.7
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 3.8e-12 73.6 36 88.9
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 8.4e-12 72.4 36 86.1
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 1.1e-11 72.0 36 83.3
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.1e-11 72.0 36 83.3
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.4e-11 71.6 36 88.9
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 1.4e-11 71.6 36 88.9
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.4e-11 71.6 36 86.1
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.9e-11 71.2 37 86.5
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 2.5e-11 70.9 36 86.1
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 3.2e-11 70.5 36 80.6
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 3.2e-11 70.5 36 80.6
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 3.2e-11 70.5 36 80.6
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 3.2e-11 70.5 36 80.6
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 3.2e-11 70.5 36 80.6
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 3.2e-11 70.5 36 80.6
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 3.2e-11 70.5 37 83.8
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 3.2e-11 70.5 37 83.8
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 5.5e-11 69.7 36 83.3
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 5.5e-11 69.7 36 83.3
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 5.5e-11 69.7 36 83.3
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 7.1e-11 69.3 36 86.1
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 7.1e-11 69.3 36 83.3
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.2e-10 68.6 37 81.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.2e-10 68.6 37 81.1
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 83.3
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 83.3
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 80.6
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 80.6
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 80.6
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 80.6
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 83.3
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 1.2e-10 68.6 36 80.6
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 2.1e-10 67.8 36 86.1
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 2.1e-10 67.8 36 80.6
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 2.7e-10 67.4 36 80.6
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 2.7e-10 67.4 36 77.8
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 2.7e-10 67.4 36 80.6
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 2.7e-10 67.4 35 85.7
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 3.5e-10 67.0 36 80.6
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 3.5e-10 67.0 36 83.3
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 4.6e-10 66.6 32 87.5
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 4.6e-10 66.6 32 87.5
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 6.0e-10 66.2 36 83.3
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 6.0e-10 66.2 34 79.4
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 6.0e-10 66.2 36 80.6
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 7.9e-10 65.9 34 85.3
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 7.9e-10 65.9 36 77.8
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.0e-09 65.5 36 77.8
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.0e-09 65.5 35 77.1
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 1.0e-09 65.5 34 79.4
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.3e-09 65.1 32 87.5
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.3e-09 65.1 36 75.0
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.3e-09 65.1 36 75.0
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.3e-09 65.1 36 80.6
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.8e-09 64.7 36 77.8
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.8e-09 64.7 36 77.8
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 2.3e-09 64.3 36 77.8
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 3.0e-09 63.9 36 77.8
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 3.9e-09 63.5 36 75.0
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 5.1e-09 63.2 36 75.0
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 5.1e-09 63.2 36 72.2
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 1.1e-08 62.0 36 69.4
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 7.4e-08 59.3 33 81.8
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 7.4e-08 59.3 36 69.4
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 9.6e-08 58.9 36 75.0
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 1.6e-07 58.2 31 80.6
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 2.8e-07 57.4 36 72.2
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 2.8e-07 57.4 36 72.2
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 2.8e-07 57.4 32 78.1
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 8.2e-07 55.8 32 71.9
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 8.2e-07 55.8 36 69.4
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.4e-06 55.1 32 75.0
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 3.1e-06 53.9 36 66.7
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 4.0e-06 53.5 32 71.9
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 6.9e-06 52.8 32 75.0


User provided reference genes

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