Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p35670 Brassica napus HOM05D009742 ORTHO05D016608 2.3e-40 168.3 78 100.0
BraA03t12742Z Brassica rapa HOM05D009742 ORTHO05D016608 2.3e-40 168.3 78 100.0
BcaC01g04263 Brassica carinata HOM05D009742 ORTHO05D016608 1.2e-31 139.4 76 90.8
BolC3t16602H Brassica oleracea HOM05D009742 ORTHO05D016608 1.5e-31 139.0 78 89.7
BcaB03g11570 Brassica carinata HOM05D009742 ORTHO05D016608 7.5e-31 136.7 78 85.9
AL3G21530 Arabidopsis lyrata HOM05D009742 ORTHO05D016608 1.5e-26 122.5 76 75.0
CARHR084680 Cardamine hirsuta HOM05D009742 ORTHO05D016608 5.2e-24 114.0 73 75.3
Carub.0003s0936 Capsella rubella HOM05D009742 ORTHO05D016608 6.8e-24 113.6 61 80.3
Thhalv10022345m.g Eutrema salsugineum HOM05D009742 ORTHO05D016608 1.5e-23 112.5 63 77.8
AT3G10195 Arabidopsis thaliana HOM05D009742 ORTHO05D016608 3.7e-22 107.8 78 65.4
BcaC09g48109 Brassica carinata HOM05D009742 ORTHO05D024001 8.3e-14 80.1 81 53.1
BolC1t05415H Brassica oleracea HOM05D009742 ORTHO05D024001 8.3e-14 80.1 81 53.1
BolC1t05417H Brassica oleracea HOM05D009742 ORTHO05D039915 1.8e-13 79.0 81 54.3
BcaB04g21224 Brassica carinata HOM05D009742 ORTHO05D024001 5.4e-13 77.4 80 55.0
A01p42000 Brassica napus HOM05D009742 ORTHO05D024001 5.4e-13 77.4 81 54.3
BraA01t04268Z Brassica rapa HOM05D009742 ORTHO05D024001 5.4e-13 77.4 81 54.3
C03p43320 Brassica napus HOM05D009742 ORTHO05D097810 5.9e-12 73.9 68 58.8
BcaC09g48110 Brassica carinata HOM05D009742 ORTHO05D032499 1.5e-10 69.3 81 53.1
A01p42010 Brassica napus HOM05D009742 ORTHO05D032499 3.1e-08 61.6 81 49.4
BraA01t04269Z Brassica rapa HOM05D009742 ORTHO05D032499 3.1e-08 61.6 81 49.4
BcaB04g21223 Brassica carinata HOM05D009742 ORTHO05D024321 4.0e-08 61.2 74 48.6
BcaC09g48112 Brassica carinata HOM05D009742 ORTHO05D039915 1.3e-06 56.2 64 46.9
BcaB04g21226 Brassica carinata HOM05D009742 ORTHO05D092332 6.4e-06 53.9 65 46.2


User provided reference genes

Program Settings