Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p33340 Brassica napus HOM05D001733 ORTHO05D001882 2.5e-124 448.7 221 100.0
BcaC01g04396 Brassica carinata HOM05D001733 ORTHO05D001882 3.4e-121 438.3 221 98.6
BolC3t16323H Brassica oleracea HOM05D001733 ORTHO05D001882 3.4e-121 438.3 221 98.6
C03p40580 Brassica napus HOM05D001733 ORTHO05D001882 1.3e-120 436.4 221 98.2
BraA03t12505Z Brassica rapa HOM05D001733 ORTHO05D001882 9.3e-119 430.3 221 96.4
Carub.0003s0276 Capsella rubella HOM05D001733 ORTHO05D001882 4.6e-118 427.9 221 94.6
AL3G13370 Arabidopsis lyrata HOM05D001733 ORTHO05D001882 1.0e-117 426.8 221 94.1
Thhalv10021487m.g Eutrema salsugineum HOM05D001733 ORTHO05D001882 1.0e-117 426.8 221 94.6
AT3G03600 Arabidopsis thaliana HOM05D001733 ORTHO05D001882 1.7e-117 426.0 221 93.7
Sp3g02590 Schrenkiella parvula HOM05D001733 ORTHO05D001882 1.6e-115 419.5 221 91.9
CARHR077640 Cardamine hirsuta HOM05D001733 ORTHO05D001882 2.1e-115 419.1 221 92.8
C05p63290 Brassica napus HOM05D001733 ORTHO05D001882 1.2e-113 413.3 208 97.1
BolC5t34992H Brassica oleracea HOM05D001733 ORTHO05D001882 3.4e-113 411.8 208 96.6
BcaC05g29865 Brassica carinata HOM05D001733 ORTHO05D001882 1.7e-112 409.5 208 95.7
BcaC05g30264 Brassica carinata HOM05D001733 ORTHO05D001882 2.9e-112 408.7 219 91.8
A05p43710 Brassica napus HOM05D001733 ORTHO05D001882 1.9e-111 406.0 205 96.6
BraA05t23110Z Brassica rapa HOM05D001733 ORTHO05D001882 2.7e-110 402.1 205 96.1
Aa31LG5G14110 Aethionema arabicum HOM05D001733 ORTHO05D001882 5.6e-108 394.4 208 90.9
THA.LOC104820811 Tarenaya hassleriana HOM05D001733 ORTHO05D001882 6.7e-101 370.9 212 83.0
BcaB04g19363 Brassica carinata HOM05D001733 ORTHO05D001882 5.3e-98 361.3 221 82.8
Cpa.g.sc73.32 Carica papaya HOM05D001733 ORTHO05D001882 5.1e-77 291.6 215 64.7
MD02G1230600 Malus domestica HOM05D001733 ORTHO05D001882 4.1e-74 282.0 204 66.2
Eucgr.D01117 Eucalyptus grandis HOM05D001733 ORTHO05D001882 4.5e-73 278.5 204 68.6
Ciclev10023278m.g Citrus clementina HOM05D001733 ORTHO05D001882 5.9e-73 278.1 205 66.3
Lj1g0025923 Lotus japonicus HOM05D001733 ORTHO05D001882 8.5e-72 274.2 207 64.7
Haze_15782 Corylus avellana HOM05D001733 ORTHO05D001882 1.4e-71 273.5 213 62.9
Cfa003706 Carpinus fangiana HOM05D001733 ORTHO05D001882 1.9e-71 273.1 213 63.4
TWI39G0742 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 9.4e-71 270.8 209 62.7
Sabra13G0060700 Salix brachista HOM05D001733 ORTHO05D001882 1.2e-70 270.4 214 61.7
Prupe.2G107500 Prunus persica HOM05D001733 ORTHO05D001882 2.7e-70 269.2 201 65.2
CiPaw.02G047900 Carya illinoinensis HOM05D001733 ORTHO05D001882 6.1e-70 268.1 204 63.2
Manes.08G156000 Manihot esculenta HOM05D001733 ORTHO05D001882 6.1e-70 268.1 204 64.7
PGR044G0034 Punica granatum HOM05D001733 ORTHO05D001882 6.1e-70 268.1 203 65.5
Atru.chr9.238 Acer truncatum HOM05D001733 ORTHO05D001882 7.9e-70 267.7 203 62.6
QL08p048200 Quercus lobata HOM05D001733 ORTHO05D001882 2.3e-69 266.2 213 61.5
RcHm_v2.0_Chr1g0341081 Rosa chinensis HOM05D001733 ORTHO05D001882 3.0e-69 265.8 205 62.4
TWI73G0070 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 5.2e-69 265.0 217 58.5
Lsat_1_v5_gn_7_34060 Lactuca sativa HOM05D001733 ORTHO05D001882 6.7e-69 264.6 208 63.5
Cc02_g26570 Coffea canephora HOM05D001733 ORTHO05D001882 1.1e-68 263.8 211 61.6
Sed0021856 Sechium edule HOM05D001733 ORTHO05D001882 2.6e-68 262.7 220 59.1
Lalb_Chr23g0264941 Lupinus albus HOM05D001733 ORTHO05D001882 5.7e-68 261.5 202 61.4
Psat5g001280 Pisum sativum HOM05D001733 ORTHO05D001882 7.4e-68 261.2 207 60.4
Potri.013G070001 Populus trichocarpa HOM05D001733 ORTHO05D001882 9.7e-68 260.8 204 62.7
Ca_15286_v3 Cicer arietinum L. HOM05D001733 ORTHO05D001882 1.7e-67 260.0 212 57.5
Ca_15422_v3 Cicer arietinum L. HOM05D001733 ORTHO05D001882 1.7e-67 260.0 212 57.5
ClCG08G014080 Citrullus lanatus HOM05D001733 ORTHO05D001882 1.7e-67 260.0 203 61.1
FAN03G0842 Fragaria x ananassa HOM05D001733 ORTHO05D001882 1.7e-67 260.0 206 61.7
FvH4_7g08140 Fragaria vesca HOM05D001733 ORTHO05D001882 2.2e-67 259.6 206 61.7
FAN01G0027 Fragaria x ananassa HOM05D001733 ORTHO05D001882 2.2e-67 259.6 206 61.7
FAN06G0601 Fragaria x ananassa HOM05D001733 ORTHO05D001882 2.2e-67 259.6 206 61.7
FAN10G0402 Fragaria x ananassa HOM05D001733 ORTHO05D001882 3.7e-67 258.8 206 61.2
Hund19368 Selenicereus undatus HOM05D001733 ORTHO05D001882 3.7e-67 258.8 215 59.1
CANSAT78G1742 Cannabis sativa HOM05D001733 ORTHO05D001882 4.8e-67 258.5 198 62.6
Gorai.007G250600 Gossypium raimondii HOM05D001733 ORTHO05D001882 6.3e-67 258.1 218 57.3
VMungo1309G3105 Vigna mungo HOM05D001733 ORTHO05D001882 6.3e-67 258.1 216 57.9
CSS0001376 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 1.1e-66 257.3 213 60.6
CSS0011354 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 1.1e-66 257.3 213 60.6
Gohir.D11G237300 Gossypium hirsutum HOM05D001733 ORTHO05D001882 1.1e-66 257.3 218 57.3
Dinv43956 Davidia involucrata HOM05D001733 ORTHO05D001882 1.4e-66 256.9 210 61.4
HanXRQChr04g0117601 Helianthus annuus HOM05D001733 ORTHO05D001882 1.4e-66 256.9 209 60.3
Lj7P561T30 Lonicera japonica HOM05D001733 ORTHO05D001882 1.8e-66 256.5 204 61.3
DCAR_029572 Daucus carota HOM05D001733 ORTHO05D001882 2.4e-66 256.1 216 58.3
Gohir.A11G224218 Gossypium hirsutum HOM05D001733 ORTHO05D001882 2.4e-66 256.1 218 57.8
Phvul.009G117800 Phaseolus vulgaris HOM05D001733 ORTHO05D001882 3.1e-66 255.8 202 62.4
Solyc01g081520.3 Solanum lycopersicum HOM05D001733 ORTHO05D001882 5.3e-66 255.0 210 59.5
Sopen01g033080 Solanum pennellii HOM05D001733 ORTHO05D001882 5.3e-66 255.0 210 59.5
PGSC0003DMG401031123 Solanum tuberosum HOM05D001733 ORTHO05D001882 5.3e-66 255.0 210 59.5
Medtr3g118200 Medicago truncatula HOM05D001733 ORTHO05D001882 7.0e-66 254.6 199 61.8
CsaV3_2G024360 Cucumis sativus L. HOM05D001733 ORTHO05D001882 2.0e-65 253.1 203 61.1
Nitab4.5_0000792g0200 Nicotiana tabacum HOM05D001733 ORTHO05D001882 3.5e-65 252.3 210 59.5
Thecc.05G236000 Theobroma cacao HOM05D001733 ORTHO05D001882 4.5e-65 251.9 203 58.6
AUR62020701 Chenopodium quinoa HOM05D001733 ORTHO05D001882 5.9e-65 251.5 212 57.5
Glyma.06G001900 Glycine max HOM05D001733 ORTHO05D001882 5.9e-65 251.5 202 60.4
MELO3C011346.2 Cucumis melo HOM05D001733 ORTHO05D001882 1.7e-64 250.0 203 58.6
arahy.Tifrunner.gnm1.ann1.A8CT9J Arachis hypogaea HOM05D001733 ORTHO05D001882 2.2e-64 249.6 210 57.6
AUR62028023 Chenopodium quinoa HOM05D001733 ORTHO05D001882 2.2e-64 249.6 212 57.1
Duzib106G0611 Durio zibethinus HOM05D001733 ORTHO05D001882 2.2e-64 249.6 203 59.6
Nitab4.5_0007787g0030 Nicotiana tabacum HOM05D001733 ORTHO05D001882 3.8e-64 248.8 210 58.6
vmacro15942 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 1.1e-63 247.3 219 57.5
TAR362G0336 Trochodendron aralioides HOM05D001733 ORTHO05D001882 1.9e-63 246.5 200 60.0
Sc06g0001410 Simmondsia chinensis HOM05D001733 ORTHO05D001882 3.2e-63 245.7 213 55.9
EL10Ac2g03646 Beta vulgaris HOM05D001733 ORTHO05D001882 7.2e-63 244.6 212 54.2
Oeu060721.2 Olea europaea HOM05D001733 ORTHO05D001882 1.8e-61 240.0 202 58.4
Aqoxy7G03741 Aquilegia oxysepala HOM05D001733 ORTHO05D001882 3.0e-61 239.2 213 57.7
MSTRG.20625 Avicennia marina HOM05D001733 ORTHO05D001882 6.7e-61 238.0 220 55.5
ECA236G4258 Erigeron canadensis HOM05D000200 ORTHO05D000262 2.0e-60 236.5 191 62.3
COL.COLO4_21825 Corchorus olitorius HOM05D001733 ORTHO05D001882 2.6e-60 236.1 203 53.2
Migut.B01416 Erythranthe guttata HOM05D001733 ORTHO05D001882 2.8e-59 232.6 203 53.7
SGA_v2.0_scaffold98G29368 Striga asiatica HOM05D001733 ORTHO05D001882 8.2e-59 231.1 206 54.9
Rhsim07G0048200 Rhododendron simsii HOM05D001733 ORTHO05D001882 5.3e-58 228.4 202 56.4
unitig_0.g1363 Utricularia gibba HOM05D001733 ORTHO05D001882 1.2e-57 227.3 213 51.2
SalBow5G0061 Salvia bowleyana HOM05D001733 ORTHO05D001882 4.5e-57 225.3 200 54.0
Actinidia26430 Actinidia chinensis HOM05D001733 ORTHO05D001882 7.5e-52 208.0 173 59.0
Cc08_g05780 Coffea canephora HOM05D001733 ORTHO05D001882 1.1e-47 194.1 174 58.0
Cc05_g05120 Coffea canephora HOM05D001733 ORTHO05D001882 1.5e-47 193.7 174 58.0
Nn044s41810 Nelumbo nucifera HOM05D001733 ORTHO05D001882 7.2e-47 191.4 200 49.0
Nn1g10086 Nelumbo nucifera HOM05D001733 ORTHO05D001882 7.2e-47 191.4 200 49.0
Ah.13g073670 Amaranthus hybridus HOM05D001733 ORTHO05D001882 1.2e-46 190.7 167 56.3
RcHm_v2.0_Chr1g0383121 Rosa chinensis HOM05D001733 ORTHO05D001882 2.0e-44 183.3 191 51.8
vmacro13603 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 3.4e-44 182.6 203 48.3
SEGI_38852 Sequoiadendron giganteum HOM05D001733 ORTHO05D001882 8.3e-43 177.9 228 41.7
RcHm_v2.0_Chr2g0085551 Rosa chinensis HOM05D001733 ORTHO05D001882 1.8e-42 176.8 137 62.8
RcHm_v2.0_Chr1g0363821 Rosa chinensis HOM05D001733 ORTHO05D001882 1.6e-38 163.7 142 57.7
TPR.G38482 Trifolium pratense HOM05D001733 ORTHO05D001882 2.8e-38 162.9 212 43.9
RcHm_v2.0_Chr5g0027611 Rosa chinensis HOM05D001733 ORTHO05D001882 1.0e-37 161.0 105 67.6
RcHm_v2.0_Chr3g0481141 Rosa chinensis HOM05D001733 ORTHO05D001882 3.0e-37 159.5 141 55.3
CAN.G1249.13 Capsicum annuum HOM05D001733 ORTHO05D001882 3.5e-33 146.0 115 59.1
RcHm_v2.0_Chr6g0246101 Rosa chinensis HOM05D001733 ORTHO05D001882 5.9e-33 145.2 105 62.9
AagrBONN_evm.TU.Sc2ySwM_228.194 Anthoceros agrestis HOM05D001733 ORTHO05D001882 1.2e-30 137.5 222 33.8
arahy.Tifrunner.gnm1.ann1.VEWU5V Arachis hypogaea HOM05D001733 ORTHO05D001882 1.2e-30 137.5 105 61.9
RcHm_v2.0_Chr5g0054321 Rosa chinensis HOM05D001733 ORTHO05D001882 4.1e-26 122.5 106 54.7
HanXRQChr16g0501591 Helianthus annuus HOM05D001733 ORTHO05D001882 1.2e-25 120.9 106 56.6
Peaxi162Scf01260g00014 Petunia axillaris HOM05D001733 ORTHO05D001882 2.7e-25 119.8 88 63.6
BcaC02g09516 Brassica carinata HOM05D001733 ORTHO05D001882 3.6e-22 109.4 92 68.5
A01p19710 Brassica napus HOM05D001733 ORTHO05D001882 2.0e-20 103.6 56 91.1
C04p32130 Brassica napus HOM05D001733 ORTHO05D001882 2.0e-20 103.6 52 98.1
C04p54460 Brassica napus HOM05D001733 ORTHO05D001882 3.4e-20 102.8 53 96.2
BolC4t25944H Brassica oleracea HOM05D001733 ORTHO05D001882 4.4e-20 102.4 52 96.2
C03p74560 Brassica napus HOM05D001733 ORTHO05D001882 1.3e-19 100.9 52 94.2
Zm00001eb385930 Zea mays HOM05D022646 ORTHO05D001882 2.4e-18 96.7 96 52.1
Zm00001eb436200 Zea mays HOM05D022646 ORTHO05D001882 2.4e-18 96.7 96 52.1
Zm00001eb436250 Zea mays HOM05D022646 ORTHO05D001882 2.4e-18 96.7 96 52.1
Zm00001eb436290 Zea mays HOM05D022646 ORTHO05D001882 2.4e-18 96.7 96 52.1
Zm00001eb436330 Zea mays HOM05D022646 ORTHO05D001882 2.4e-18 96.7 96 52.1
arahy.Tifrunner.gnm1.ann1.3YR680 Arachis hypogaea HOM05D001733 ORTHO05D001882 8.6e-16 88.2 70 57.1
RcHm_v2.0_Chr5g0036111 Rosa chinensis HOM05D001733 ORTHO05D001882 1.1e-15 87.8 140 37.1
arahy.Tifrunner.gnm1.ann1.BIR89S Arachis hypogaea HOM05D001903 ORTHO05D001847 7.8e-09 65.1 84 45.2
Mapoly0051s0114 Marchantia polymorpha HOM05D052641 ORTHO05D001882 7.3e-07 58.5 74 43.2
Gorai.008G076300 Gossypium raimondii HOM05D001733 ORTHO05D047820 9.6e-07 58.2 41 58.5
ATR0660G006 Amborella trichopoda HOM05D001733 ORTHO05D001882 2.8e-06 56.6 47 51.1
Gohir.D12G069601 Gossypium hirsutum HOM05D001733 ORTHO05D047820 2.8e-06 56.6 41 56.1


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