Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 7.7e-80 300.4 154 100.0
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 7.7e-80 300.4 154 100.0
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.7e-77 292.0 154 97.4
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.7e-77 292.0 154 97.4
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 2.3e-76 288.9 154 96.8
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 4.1e-73 278.1 157 91.7
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.2e-64 250.0 155 83.9
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.2e-64 250.0 155 83.9
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 2.3e-63 245.7 150 87.3
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.9e-63 245.4 147 86.4
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 5.0e-63 244.6 147 85.7
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.2e-59 233.4 151 83.4
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.4e-59 231.9 148 82.4
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 2.8e-53 212.2 150 74.0
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.7e-47 193.0 155 64.5
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.4e-43 178.3 108 85.2
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 2.1e-40 169.5 154 56.5
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.7e-39 166.4 153 56.2
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 5.1e-39 164.9 151 53.6
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.9e-38 162.9 158 52.5
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 5.6e-38 161.4 144 55.6
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 5.6e-38 161.4 144 55.6
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 7.3e-38 161.0 157 49.7
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 7.3e-38 161.0 147 54.4
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 9.5e-38 160.6 156 51.3
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.6e-37 159.8 158 51.9
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.6e-37 159.8 156 50.6
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 3.6e-37 158.7 159 50.9
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 6.2e-37 157.9 150 53.3
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 8.1e-37 157.5 157 52.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.1e-36 157.1 156 50.6
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.3e-36 156.0 154 51.9
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 2.3e-36 156.0 157 48.4
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 5.2e-36 154.8 159 51.6
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 5.2e-36 154.8 159 50.3
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 6.8e-36 154.5 157 51.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-35 152.9 156 49.4
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.0e-35 152.9 157 49.7
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.6e-35 152.5 157 47.1
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 4.4e-35 151.8 158 50.0
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 5.8e-35 151.4 157 49.7
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 7.6e-35 151.0 146 51.4
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.3e-34 150.2 147 48.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.3e-34 150.2 151 51.0
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 2.2e-34 149.4 155 50.3
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 2.2e-34 149.4 156 50.6
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 2.9e-34 149.1 146 53.4
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.9e-34 149.1 156 47.4
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 3.7e-34 148.7 147 53.7
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.7e-34 148.7 148 50.7
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 4.9e-34 148.3 155 49.0
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 6.4e-34 147.9 154 50.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 8.4e-34 147.5 146 51.4
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.1e-33 147.1 145 53.8
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.9e-33 146.4 150 48.7
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.9e-33 146.4 159 49.7
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.9e-33 146.4 153 47.7
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.4e-33 146.0 151 49.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 3.2e-33 145.6 136 53.7
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 4.1e-33 145.2 154 47.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 4.1e-33 145.2 160 44.4
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 4.1e-33 145.2 155 47.7
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 7.1e-33 144.4 148 49.3
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 9.2e-33 144.1 147 52.4
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.2e-32 143.7 156 46.2
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.1e-32 142.9 143 51.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.1e-32 142.9 159 48.4
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.7e-32 142.5 136 52.9
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 4.6e-32 141.7 150 48.7
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.6e-32 141.7 154 49.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 4.6e-32 141.7 155 46.5
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.0e-32 141.4 150 49.3
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 7.8e-32 141.0 155 47.7
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.8e-32 141.0 159 48.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 3.0e-31 139.0 155 46.5
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.0e-31 139.0 150 50.7
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 3.0e-31 139.0 136 51.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 3.9e-31 138.7 156 47.4
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 3.9e-31 138.7 150 46.7
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.9e-31 138.7 154 48.1
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 3.9e-31 138.7 150 50.7
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 5.1e-31 138.3 151 43.7
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 6.6e-31 137.9 149 48.3
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 8.6e-31 137.5 150 47.3
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.1e-30 137.1 152 46.1
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.5e-30 136.7 159 47.2
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.9e-30 136.3 165 48.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 3.3e-30 135.6 156 46.8
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 9.6e-30 134.0 152 45.4
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 5.2e-28 128.3 124 54.8
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 6.8e-28 127.9 153 45.8
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 6.8e-28 127.9 158 46.2
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 8.9e-28 127.5 121 52.9
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.0e-27 126.3 163 41.1
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.6e-27 125.9 110 54.5
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 5.8e-27 124.8 152 42.8
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.9e-26 122.5 135 50.4
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.9e-25 119.8 126 46.8
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 5.4e-25 118.2 128 49.2
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 2.1e-24 116.3 146 43.8
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.0e-23 114.0 158 44.3
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 2.3e-23 112.8 156 41.0
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 5.1e-23 111.7 118 46.6
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.1e-22 110.5 132 44.7
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.1e-21 106.3 158 39.2
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.1e-20 102.4 96 53.1
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.3e-15 87.0 73 53.4
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 5.1e-15 85.1 74 52.7
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.2e-09 65.9 83 47.0
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.6e-08 63.5 59 55.9
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.1e-08 63.2 129 34.9
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.8e-07 60.1 135 31.9


User provided reference genes

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