Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 5.2e-105 384.4 197 100.0
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 1.2e-101 373.2 197 97.5
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.3e-100 369.8 197 96.4
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 8.0e-98 360.5 198 94.9
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 3.4e-96 355.1 198 93.9
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 3.4e-96 355.1 198 93.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.6e-90 336.3 197 88.3
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.6e-90 336.3 194 90.2
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 1.6e-85 319.7 197 85.3
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.7e-82 308.1 198 83.8
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 1.4e-81 306.6 198 82.8
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 3.2e-78 295.4 190 80.0
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 3.5e-77 292.0 197 80.7
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 2.4e-65 252.7 131 99.2
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.7e-61 239.2 188 66.5
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.7e-61 239.2 188 68.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.1e-59 233.8 190 69.5
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 4.3e-59 231.9 188 64.9
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 7.3e-59 231.1 190 67.4
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 7.3e-59 231.1 188 65.4
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 9.6e-59 230.7 188 64.9
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.6e-58 229.9 190 63.7
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 3.6e-58 228.8 150 76.7
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 4.8e-58 228.4 191 66.5
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 8.1e-58 227.6 194 60.8
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 8.1e-58 227.6 194 62.9
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.1e-57 227.3 150 76.0
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.1e-57 227.3 197 62.9
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.1e-57 225.7 188 64.4
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 5.3e-57 224.9 190 64.2
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 5.3e-57 224.9 195 63.6
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.6e-56 222.6 190 63.7
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.4e-56 222.2 188 61.7
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 3.4e-56 222.2 144 76.4
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 4.5e-56 221.9 197 63.5
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.3e-55 220.3 190 63.7
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.3e-55 220.3 192 64.6
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.3e-55 220.3 198 63.6
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 2.2e-55 219.5 140 79.3
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.9e-55 219.2 188 61.2
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 6.4e-55 218.0 188 61.7
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.4e-54 216.9 197 62.4
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.9e-54 216.5 203 61.1
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.9e-54 216.5 189 64.6
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 4.2e-54 215.3 160 69.4
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 5.4e-54 214.9 147 75.5
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 7.1e-54 214.5 164 68.9
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 9.3e-54 214.2 201 60.2
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 9.3e-54 214.2 190 61.6
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.6e-53 213.4 139 76.3
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.1e-53 213.0 160 71.2
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 2.7e-53 212.6 157 70.7
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 3.5e-53 212.2 172 65.7
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 4.6e-53 211.8 194 60.3
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 7.9e-53 211.1 194 59.8
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.0e-52 210.7 200 58.5
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.0e-52 210.7 132 78.0
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.3e-52 209.5 169 67.5
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.0e-52 209.1 181 64.1
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.0e-52 209.1 132 78.8
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 3.0e-52 209.1 132 78.8
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 3.0e-52 209.1 145 73.8
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 3.9e-52 208.8 183 65.0
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 5.1e-52 208.4 129 79.1
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 8.7e-52 207.6 188 61.2
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.5e-51 206.8 181 62.4
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.9e-51 206.5 215 57.2
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 3.3e-51 205.7 140 72.1
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 3.3e-51 205.7 132 75.8
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 4.3e-51 205.3 141 73.8
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 7.4e-51 204.5 145 69.0
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 2.1e-50 203.0 134 76.9
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 8.1e-50 201.1 190 59.5
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.1e-49 200.7 158 68.4
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 1.8e-49 199.9 136 74.3
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.8e-49 199.9 162 65.4
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.4e-49 199.5 220 52.7
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 2.4e-49 199.5 158 67.7
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 4.5e-48 195.3 226 50.9
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.0e-47 194.1 167 62.9
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.0e-47 194.1 156 67.3
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 2.9e-47 192.6 123 72.4
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 3.8e-47 192.2 189 56.6
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 4.2e-46 188.7 177 60.5
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 2.1e-45 186.4 131 71.0
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.0e-44 184.1 126 71.4
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 6.7e-44 181.4 163 63.2
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 5.0e-39 165.2 122 68.9
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 8.4e-39 164.5 200 50.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.1e-37 159.8 104 79.8
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 4.6e-37 158.7 133 65.4
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 2.3e-36 156.4 99 80.8
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 5.1e-36 155.2 103 74.8
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.1e-35 154.1 84 92.9
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.1e-35 154.1 95 80.0
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.1e-35 154.1 149 61.1
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.6e-34 150.2 103 74.8
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.6e-34 150.2 99 78.8
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.1e-33 145.6 99 76.8
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 4.1e-33 145.6 95 77.9
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 2.0e-32 143.3 152 57.2
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 7.2e-30 134.8 102 65.7
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 9.4e-30 134.4 123 52.8
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 7.9e-29 131.3 147 49.7
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 3.0e-28 129.4 106 64.2
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 3.3e-27 125.9 195 41.5
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.2e-23 113.2 78 71.8
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.8e-23 112.5 71 83.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.8e-23 112.5 71 83.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.2e-21 107.5 68 72.1
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.7e-18 97.1 81 61.7
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.2e-16 90.9 109 39.4
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.2e-16 90.9 63 73.0
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 5.9e-16 88.6 71 67.6
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.0e-12 77.8 39 92.3
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.0e-12 77.8 39 92.3


User provided reference genes

Program Settings