Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 1.3e-132 476.5 255 100.0
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 2.9e-132 475.3 255 99.6
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 2.0e-117 426.0 259 91.1
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 2.0e-117 426.0 259 91.1
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 2.0e-117 426.0 259 91.1
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 5.9e-117 424.5 261 88.1
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 8.8e-97 357.5 263 77.2
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 7.0e-94 347.8 261 76.2
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 8.5e-92 340.9 260 75.4
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 5.5e-91 338.2 256 75.8
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 4.0e-89 332.0 257 76.7
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 4.5e-77 292.0 242 72.3
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 9.5e-67 257.7 249 63.5
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 1.7e-60 236.9 301 55.1
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 2.3e-57 226.5 266 56.0
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.1e-57 226.1 246 58.1
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.1e-57 226.1 244 57.8
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.1e-57 226.1 246 58.1
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 4.0e-57 225.7 264 55.3
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 4.0e-57 225.7 246 58.1
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 2.2e-55 219.9 244 60.2
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.9e-55 219.5 266 54.1
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.9e-55 219.5 266 54.1
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 3.7e-55 219.2 154 77.9
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 3.7e-55 219.2 206 63.6
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 4.9e-55 218.8 207 64.3
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 6.4e-55 218.4 267 55.1
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 1.1e-54 217.6 268 54.1
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 2.4e-54 216.5 209 66.5
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 2.4e-54 216.5 243 57.2
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 4.1e-54 215.7 209 64.1
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 4.1e-54 215.7 264 53.4
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.2e-54 214.5 267 52.8
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 9.2e-54 214.5 267 52.8
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 9.2e-54 214.5 183 71.0
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 9.2e-54 214.5 258 58.9
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.1e-53 213.4 204 60.3
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 2.7e-53 213.0 211 63.0
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 3.5e-53 212.6 261 53.3
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 3.5e-53 212.6 291 51.2
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 6.0e-53 211.8 204 61.8
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 6.0e-53 211.8 244 55.7
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 6.0e-53 211.8 246 56.1
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 1.0e-52 211.1 276 50.0
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 2.3e-52 209.9 247 55.9
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 3.0e-52 209.5 269 52.0
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 5.1e-52 208.8 204 59.8
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 5.1e-52 208.8 244 58.2
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 6.6e-52 208.4 207 61.4
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 6.6e-52 208.4 262 54.2
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 8.6e-52 208.0 271 52.4
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 1.1e-51 207.6 245 54.7
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 1.1e-51 207.6 180 67.8
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 1.9e-51 206.8 248 56.5
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 2.5e-51 206.5 186 66.1
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 5.6e-51 205.3 218 62.8
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 9.5e-51 204.5 233 57.1
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 1.6e-50 203.8 264 52.7
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 1.6e-50 203.8 248 56.5
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.8e-50 203.0 245 53.1
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.7e-50 202.2 264 51.1
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 4.7e-50 202.2 249 55.0
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 8.1e-50 201.4 275 53.8
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 1.8e-49 200.3 245 53.5
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 2.3e-49 199.9 269 50.6
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 2.3e-49 199.9 182 65.4
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 3.1e-49 199.5 184 63.6
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 3.1e-49 199.5 204 59.8
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 2.0e-48 196.8 187 63.1
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 2.0e-48 196.8 195 59.5
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 5.8e-48 195.3 182 64.3
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 7.6e-48 194.9 268 49.6
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 9.9e-48 194.5 204 58.3
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 9.9e-48 194.5 247 52.6
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 9.9e-48 194.5 257 51.0
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 1.3e-47 194.1 202 60.4
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 1.7e-47 193.7 269 50.9
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 1.7e-47 193.7 255 51.0
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 2.9e-47 193.0 197 58.9
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 4.9e-47 192.2 230 53.5
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 4.9e-47 192.2 259 52.5
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 1.1e-46 191.0 262 49.2
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 1.9e-46 190.3 253 51.0
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 4.1e-46 189.1 208 58.7
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 4.1e-46 189.1 198 59.1
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 4.6e-45 185.7 269 48.0
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 1.0e-44 184.5 295 44.4
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 5.1e-44 182.2 220 53.6
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 1.1e-43 181.0 197 56.9
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 1.9e-43 180.3 231 54.1
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 1.9e-43 180.3 274 45.6
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 1.6e-42 177.2 264 45.5
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.6e-42 177.2 210 54.8
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 2.1e-42 176.8 236 52.1
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 4.7e-42 175.6 207 56.0
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 4.0e-41 172.6 218 51.8
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 3.4e-40 169.5 178 58.4
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 9.9e-40 167.9 187 57.2
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 1.3e-39 167.5 220 52.3
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.7e-39 167.2 218 49.1
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 1.6e-37 160.6 207 49.3
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 4.6e-37 159.1 201 52.7
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 7.8e-37 158.3 199 53.8
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.0e-36 157.9 218 47.7
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 1.0e-36 157.9 178 57.9
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 5.1e-36 155.6 217 48.8
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 1.3e-34 151.0 193 51.8
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 3.6e-34 149.4 180 53.9
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 8.1e-34 148.3 177 52.0
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 2.4e-33 146.7 155 58.7
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 1.5e-32 144.1 176 51.7
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 4.4e-32 142.5 422 34.1
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 6.4e-31 138.7 186 52.2
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.4e-30 137.5 183 50.8
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 1.9e-30 137.1 133 60.9
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 3.5e-29 132.9 181 48.1
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 3.5e-29 132.9 206 47.6
CARHR290830 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.3e-26 124.4 177 50.3
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 3.1e-25 119.8 255 39.6
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 2.3e-20 103.6 202 39.1
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 2.1e-18 97.1 135 47.4
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 2.8e-18 96.7 247 37.7
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 6.9e-17 92.0 130 48.5
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 9.0e-17 91.7 245 35.9
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 1.6e-13 80.9 127 47.2
C03p38050 Brassica napus HOM05D006128 ORTHO05D007466 7.9e-13 78.6 51 84.3
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 6.7e-12 75.5 155 42.6
RcHm_v2.0_Chr7g0241891 Rosa chinensis HOM05D006128 ORTHO05D007466 1.1e-11 74.7 52 73.1
BolC3t16090H Brassica oleracea HOM05D006128 ORTHO05D007466 9.6e-11 71.6 44 86.4
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 4.8e-10 69.3 73 57.5
BraA03t12301Z Brassica rapa HOM05D006128 ORTHO05D007466 1.1e-09 68.2 44 84.1
Oeu047380.1 Olea europaea HOM05D006128 ORTHO05D007466 3.1e-09 66.6 87 48.3
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 1.5e-08 64.3 89 47.2


User provided reference genes

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