Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 6.8e-102 374.0 190 100.0
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.8e-99 365.9 190 96.8
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 4.1e-99 364.8 190 96.8
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 4.1e-99 364.8 190 96.8
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 3.5e-98 361.7 190 97.4
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 2.9e-92 342.0 190 91.6
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 3.9e-81 305.1 188 85.1
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.5e-80 303.1 189 83.6
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 4.3e-80 301.6 188 83.0
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 4.3e-80 301.6 189 82.5
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.1e-79 299.3 188 81.9
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 8.1e-79 297.4 189 82.0
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 3.4e-77 292.0 188 80.3
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.2e-74 283.5 188 78.2
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.5e-72 276.6 189 76.7
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.9e-67 259.6 212 67.9
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 4.3e-56 221.9 194 62.9
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 2.1e-55 219.5 189 60.3
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 2.8e-55 219.2 201 61.2
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 4.8e-55 218.4 203 58.6
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 9.0e-54 214.2 178 64.6
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.0e-54 214.2 178 64.6
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.5e-53 213.4 189 59.8
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.5e-53 213.4 127 75.6
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.0e-53 213.0 197 60.4
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.0e-53 213.0 196 58.7
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.6e-53 212.6 178 64.6
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.4e-53 212.2 188 60.6
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 3.4e-53 212.2 139 74.8
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 5.8e-53 211.5 187 59.4
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.9e-53 210.7 178 64.6
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 1.7e-52 209.9 190 58.4
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.9e-52 209.1 197 59.9
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 6.4e-52 208.0 187 58.3
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 6.4e-52 208.0 200 57.5
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.1e-51 207.2 197 59.9
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.4e-51 206.8 123 77.2
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.9e-51 206.5 197 59.9
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.9e-51 206.5 129 72.1
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.4e-51 206.1 187 58.8
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.4e-51 206.1 187 59.9
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 4.2e-51 205.3 187 59.9
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 4.2e-51 205.3 198 60.1
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 5.4e-51 204.9 194 58.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 5.4e-51 204.9 124 74.2
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 7.1e-51 204.5 187 57.2
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 9.3e-51 204.1 193 58.5
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 9.3e-51 204.1 167 60.5
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.2e-50 203.8 126 73.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.2e-50 203.8 187 57.2
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.2e-50 203.8 158 63.3
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 2.1e-50 203.0 138 73.2
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.1e-50 203.0 136 69.1
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 2.1e-50 203.0 158 62.7
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 3.5e-50 202.2 150 61.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.5e-50 202.2 137 70.1
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 4.6e-50 201.8 142 65.5
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 6.0e-50 201.4 134 67.9
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 7.9e-50 201.1 150 63.3
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 7.9e-50 201.1 183 57.9
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 7.9e-50 201.1 141 67.4
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.3e-49 200.3 142 68.3
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.7e-49 199.9 199 57.8
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.3e-49 199.5 191 56.0
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 2.3e-49 199.5 212 50.9
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 5.1e-49 198.4 145 66.2
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 5.1e-49 198.4 124 70.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 5.1e-49 198.4 169 61.5
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 5.1e-49 198.4 191 56.0
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.1e-49 198.4 186 54.3
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 6.6e-49 198.0 192 55.7
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.1e-48 197.2 174 58.6
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.5e-48 196.8 141 68.8
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 1.9e-48 196.4 134 66.4
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 2.5e-48 196.1 122 73.8
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 2.5e-48 196.1 188 58.5
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 4.3e-48 195.3 181 55.8
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 4.3e-48 195.3 195 56.9
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 5.6e-48 194.9 192 55.7
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 5.6e-48 194.9 184 55.4
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 5.6e-48 194.9 184 53.8
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 5.6e-48 194.9 184 53.8
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 5.6e-48 194.9 204 51.5
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 7.3e-48 194.5 196 55.1
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 7.3e-48 194.5 174 59.8
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.6e-47 193.4 195 54.4
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.8e-47 192.6 142 64.8
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 3.6e-47 192.2 190 52.6
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 8.1e-47 191.0 169 59.2
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 3.1e-46 189.1 136 65.4
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.1e-46 189.1 184 52.7
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 4.0e-46 188.7 179 56.4
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 4.5e-45 185.3 143 65.0
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 7.6e-45 184.5 191 52.9
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 9.9e-45 184.1 149 60.4
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.7e-44 183.3 185 51.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.9e-43 179.9 194 52.6
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 3.2e-43 179.1 137 61.3
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 7.1e-43 177.9 113 73.5
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 9.3e-43 177.6 112 73.2
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.7e-42 176.0 168 57.7
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 5.1e-41 171.8 116 68.1
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.3e-40 169.1 166 54.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.6e-40 168.3 183 48.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 5.6e-40 168.3 116 69.0
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 7.4e-40 167.9 179 48.0
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 5.3e-38 161.8 93 82.8
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 6.9e-38 161.4 115 66.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 4.5e-37 158.7 129 57.4
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 7.6e-37 157.9 128 57.0
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.1e-35 154.1 122 62.3
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.4e-35 153.7 91 76.9
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 9.3e-35 151.0 159 56.0
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 4.3e-32 142.1 109 59.6
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 9.6e-32 141.0 147 55.8
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.4e-30 137.1 89 68.5
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 2.4e-30 136.3 147 51.7
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 3.1e-30 136.0 163 50.9
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 2.0e-29 133.3 109 58.7
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 3.4e-29 132.5 145 45.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.5e-29 132.1 98 63.3
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 3.8e-28 129.0 118 59.3
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.7e-26 122.9 73 74.0
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 4.6e-26 122.1 116 50.0
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.9e-24 116.7 78 73.1
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.8e-22 110.2 97 50.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 3.8e-20 102.4 111 45.0
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.3e-16 89.4 81 56.8
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 6.3e-15 85.1 111 39.6
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 1.0e-12 77.8 65 56.9
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.3e-12 77.4 54 63.0
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.6e-10 70.5 129 39.5
CARHR152490 Cardamine hirsuta HOM05D005819 ORTHO05D006780 3.7e-07 59.3 64 60.9
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 3.1e-06 56.2 42 59.5
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 3.1e-06 56.2 43 58.1


User provided reference genes

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