Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 1.0e-99 366.7 183 100.0
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 1.0e-91 340.1 183 94.0
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 4.0e-27 125.6 185 38.4
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 8.4e-25 117.9 175 37.1
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 4.6e-23 112.1 167 39.5
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.0e-22 110.9 182 35.7
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.7e-22 107.8 156 37.8
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.9e-21 106.7 176 35.2
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.9e-21 106.7 176 35.8
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.4e-21 104.8 176 34.7
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.6e-20 103.6 173 37.6
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.6e-20 103.6 174 34.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.1e-20 103.2 174 35.6
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.4e-19 100.5 174 35.1
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 1.8e-19 100.1 136 40.4
Carub.0001s1209 Capsella rubella HOM05D008385 ORTHO05D010806 1.8e-19 100.1 176 39.2
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 6.9e-19 98.2 180 32.2
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 2.0e-18 96.7 171 36.3
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 5.8e-18 95.1 167 40.7
AT1G11362 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.0e-17 94.4 171 35.1
AT1G48010 Arabidopsis thaliana HOM05D008385 ORTHO05D001819 1.0e-17 94.4 128 41.4
Aa31LG10G5770 Aethionema arabicum HOM05D003146 ORTHO05D001819 3.8e-17 92.4 142 34.5
Aa31LG10G5780 Aethionema arabicum HOM05D000036 ORTHO05D001038 4.9e-17 92.0 134 39.6
THA.LOC104825839 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 4.9e-17 92.0 171 35.7
Carub.0001s1211 Capsella rubella HOM05D008385 ORTHO05D010806 1.1e-16 90.9 176 38.6
THA.LOC104810183 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 1.9e-16 90.1 176 34.1
THA.LOC104810184 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 1.9e-16 90.1 176 34.1
Aa31LG10G5760 Aethionema arabicum HOM05D008385 ORTHO05D010806 2.5e-16 89.7 182 32.4
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 3.2e-16 89.4 154 32.5
BraA02t06371Z Brassica rapa HOM05D008385 ORTHO05D001819 1.2e-15 87.4 62 69.4
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 2.7e-15 86.3 177 29.9
AL1G54520 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 4.6e-15 85.5 128 39.1
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 4.6e-15 85.5 174 36.8
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 6.0e-15 85.1 177 29.4
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 6.0e-15 85.1 177 29.4
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 6.0e-15 85.1 177 29.4
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 6.0e-15 85.1 174 34.5
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 7.9e-15 84.7 180 30.0
Aa31LG8G4190 Aethionema arabicum HOM05D003146 ORTHO05D001819 1.0e-14 84.3 154 33.1
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.0e-14 84.3 165 30.9
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 1.0e-14 84.3 177 29.4
THA.LOC104801632 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.0e-14 84.3 176 32.4
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 1.3e-14 84.0 174 31.0
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 1.3e-14 84.0 174 31.0
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 1.3e-14 84.0 174 31.0
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 1.3e-14 84.0 174 31.0
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 1.8e-14 83.6 127 37.0
AT3G27999 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.8e-14 83.6 166 34.9
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 2.3e-14 83.2 182 29.1
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 2.3e-14 83.2 174 31.0
Carub.0001s1097 Capsella rubella HOM05D008385 ORTHO05D010806 2.3e-14 83.2 172 32.0
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 3.0e-14 82.8 174 30.5
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 3.0e-14 82.8 172 27.3
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 3.0e-14 82.8 182 29.1
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 3.0e-14 82.8 181 29.8
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 3.9e-14 82.4 170 29.4
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 3.9e-14 82.4 182 28.6
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 5.1e-14 82.0 182 29.1
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 1.1e-13 80.9 168 36.9
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 1.1e-13 80.9 173 30.6
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 1.1e-13 80.9 182 27.5
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 1.9e-13 80.1 182 27.5
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.9e-13 80.1 175 31.4
Carub.0001s2729 Capsella rubella HOM05D008385 ORTHO05D010806 4.3e-13 79.0 182 31.3
AT1G11593 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 5.7e-13 78.6 135 35.6
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 5.7e-13 78.6 172 33.7
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 5.7e-13 78.6 177 28.2
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 7.4e-13 78.2 172 33.1
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 7.4e-13 78.2 172 33.1
BolC8t49085H Brassica oleracea HOM05D008385 ORTHO05D010806 7.4e-13 78.2 183 31.1
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 7.4e-13 78.2 172 33.1
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 7.4e-13 78.2 180 27.8
Thhalv10009973m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 7.4e-13 78.2 177 36.2
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 9.7e-13 77.8 172 33.1
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 1.3e-12 77.4 180 28.9
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 1.3e-12 77.4 163 30.1
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 2.2e-12 76.6 172 32.6
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 2.8e-12 76.3 142 33.8
A01p37120 Brassica napus HOM05D003146 ORTHO05D001819 3.7e-12 75.9 180 28.9
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 3.7e-12 75.9 141 33.3
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 3.7e-12 75.9 168 26.8
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 3.7e-12 75.9 141 31.2
C08p14420 Brassica napus HOM05D008385 ORTHO05D010806 8.2e-12 74.7 179 31.3
AT4G03945 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 4.1e-11 72.4 166 31.9
THA.LOC104802647 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.3e-11 72.0 167 31.7
Carub.0007s3098 Capsella rubella HOM05D008385 ORTHO05D010806 6.9e-11 71.6 105 39.0
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 9.0e-11 71.2 151 34.4
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.2e-10 70.9 171 26.9
COL.COLO4_24558 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.2e-10 70.9 170 28.8
COL.COLO4_11312 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.6e-10 69.7 173 28.3
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.4e-10 69.3 173 29.5
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 7.7e-10 68.2 154 31.2
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 7.7e-10 68.2 174 27.0
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.3e-09 67.4 134 32.8
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 2.9e-09 66.2 150 30.0
COL.COLO4_04546 Corchorus olitorius HOM05D015467 ORTHO05D001819 3.8e-09 65.9 174 27.6
Migut.M00087 Erythranthe guttata HOM05D009438 ORTHO05D010870 5.0e-09 65.5 162 27.2
Thhalv10019766m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 5.0e-09 65.5 166 33.1
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 1.1e-08 64.3 133 29.3
QL04p032132 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-08 64.3 167 28.1
QL04p033186 Quercus lobata HOM05D003146 ORTHO05D001819 1.4e-08 63.9 167 27.5
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.9e-08 63.5 104 29.8
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 1.9e-08 63.5 150 29.3
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 3.2e-08 62.8 152 27.6
Carub.0001s2747 Capsella rubella HOM05D008385 ORTHO05D010806 7.2e-08 61.6 115 35.7
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 9.4e-08 61.2 153 27.5
TWI09G0758 Tripterygium wilfordii HOM05D026721 ORTHO05D001819 9.4e-08 61.2 151 31.8
BcaB04g17494 Brassica carinata HOM05D003146 ORTHO05D001819 1.6e-07 60.5 76 42.1
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 1.6e-07 60.5 173 26.0
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 143 28.7
Oeu063131.1 Olea europaea HOM05D009438 ORTHO05D010870 2.7e-07 59.7 170 27.6
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 6.1e-07 58.5 147 27.2
BraA01t03769Z Brassica rapa HOM05D003146 ORTHO05D001819 7.9e-07 58.2 128 28.1
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.4e-06 57.4 179 24.6
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 1.4e-06 57.4 174 25.9
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 1.4e-06 57.4 136 32.4
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 1.8e-06 57.0 175 26.9
Migut.M00123 Erythranthe guttata HOM05D009438 ORTHO05D010870 3.0e-06 56.2 96 35.4
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 3.9e-06 55.8 138 27.5
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 3.9e-06 55.8 174 28.7
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 3.9e-06 55.8 174 28.7
Migut.I00312 Erythranthe guttata HOM05D022792 ORTHO05D001819 5.1e-06 55.5 115 27.8
Oeu063128.1 Olea europaea HOM05D009438 ORTHO05D010870 5.1e-06 55.5 158 26.6


User provided reference genes

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