Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.4e-226 789.3 401 100.0
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 8.1e-222 773.5 401 97.8
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 9.3e-218 760.0 405 91.6
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 9.3e-218 760.0 405 91.6
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 5.1e-216 754.2 402 91.5
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 2.3e-200 702.2 414 87.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 7.4e-199 697.2 402 86.6
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 5.5e-194 681.0 424 79.0
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.5e-183 646.4 424 76.2
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.0e-168 597.0 420 71.0
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 3.0e-168 595.5 419 70.9
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 1.3e-166 590.1 418 70.1
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.7e-166 589.7 411 71.3
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.0e-148 529.6 413 63.9
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.7e-145 519.2 411 62.5
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.4e-128 463.8 443 54.6
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 3.1e-128 462.6 443 54.4
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 8.6e-115 417.9 462 48.9
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.2e-113 414.1 448 49.6
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 2.1e-113 413.3 440 49.5
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.4e-112 410.6 436 50.7
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 4.0e-112 409.1 450 48.9
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 8.9e-112 407.9 454 47.1
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.6e-111 406.4 454 50.0
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 3.4e-111 406.0 447 48.8
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 6.4e-110 401.7 457 47.7
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.1e-109 401.0 446 47.8
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.4e-109 399.8 452 47.8
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 3.2e-109 399.4 441 50.3
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 3.2e-109 399.4 430 49.5
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 5.4e-109 398.7 454 46.0
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.1e-108 396.7 454 46.0
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 4.6e-108 395.6 428 48.6
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.0e-107 394.4 443 49.2
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.3e-107 394.0 452 47.3
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 2.3e-107 393.3 454 45.6
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.9e-107 392.5 443 49.2
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.9e-107 392.5 457 47.3
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.6e-107 391.7 457 47.0
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 8.6e-107 391.3 446 46.9
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.5e-106 390.6 452 45.1
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.3e-106 389.0 452 46.2
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.1e-105 386.7 453 45.5
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.1e-104 384.4 443 48.3
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 3.1e-104 382.9 456 44.7
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.0e-104 382.5 462 45.9
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.0e-104 382.5 460 46.5
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 5.2e-104 382.1 454 45.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.2e-103 380.9 441 45.6
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 4.4e-103 379.0 437 47.4
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 5.8e-103 378.6 452 46.0
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 9.9e-103 377.9 461 47.1
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.3e-102 377.5 439 47.6
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.9e-102 376.3 452 43.8
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 2.4e-101 373.2 458 43.9
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 5.4e-101 372.1 444 46.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 5.4e-101 372.1 449 44.3
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.1e-101 371.7 446 46.4
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 3.5e-100 369.4 437 46.7
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.6e-100 369.0 443 45.8
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.0e-100 368.6 451 45.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.7e-99 367.1 442 45.7
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 3.0e-99 366.3 452 46.2
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 3.9e-99 365.9 462 44.4
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 5.1e-99 365.5 444 45.5
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.6e-99 365.2 451 45.7
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.5e-98 364.0 462 43.9
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.5e-98 363.2 473 41.9
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 2.5e-98 363.2 430 46.5
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.3e-98 362.5 444 45.5
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 5.6e-98 362.1 448 45.5
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 7.3e-98 361.7 457 44.6
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 7.3e-98 361.7 434 44.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 1.6e-97 360.5 466 42.3
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 3.6e-97 359.4 444 44.1
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 8.1e-97 358.2 430 44.2
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.4e-96 356.7 455 45.3
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.5e-95 354.0 431 43.2
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.3e-94 350.9 425 43.5
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.6e-92 344.0 439 42.4
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 7.9e-92 341.7 443 42.7
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 8.7e-91 338.2 435 43.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 3.3e-90 336.3 442 43.4
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 4.8e-89 332.4 431 42.0
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 5.3e-88 328.9 452 43.1
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 3.4e-87 326.2 455 40.2
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 7.6e-87 325.1 421 42.0
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.1e-84 317.0 414 41.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 7.9e-84 315.1 413 43.1
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.6e-81 307.4 431 39.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 2.1e-81 307.0 403 42.9
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 3.7e-81 306.2 484 38.2
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 6.2e-81 305.4 451 39.5
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 6.9e-80 302.0 426 39.7
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 9.3e-77 291.6 295 50.5
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 2.6e-71 273.5 404 39.4
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.6e-68 263.1 414 37.7
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.6e-68 263.1 332 41.9
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 5.3e-64 249.2 480 32.7
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 2.2e-57 227.3 314 41.1
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-53 214.9 279 44.1
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.6e-52 211.1 192 53.1
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 3.6e-52 209.9 290 42.4
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.7e-49 201.1 516 29.1
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 2.2e-49 200.7 316 36.7
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 5.3e-48 196.1 420 34.0
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 2.1e-44 184.1 212 47.6
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 1.2e-36 158.3 217 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.8e-35 154.5 459 25.3
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.6e-30 135.6 99 59.6
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.2e-28 131.7 186 42.5
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 1.0e-27 128.6 430 24.9
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.3e-22 111.7 100 55.0
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.0e-22 109.8 149 40.3
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.4e-18 97.1 128 41.4
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 1.7e-17 94.7 213 31.9
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 4.9e-17 93.2 98 50.0
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.3e-17 92.4 65 58.5
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.6e-12 78.2 115 40.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 3.6e-12 77.0 89 44.9
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 7.5e-10 69.3 63 57.1
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 6.4e-09 66.2 63 50.8
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 3.2e-08 63.9 160 29.4
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.6e-07 61.6 51 56.9


User provided reference genes

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