Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 1.3e-199 699.5 347 100.0
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 3.8e-167 591.7 315 94.3
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 3.3e-163 578.6 289 97.9
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 4.0e-161 571.6 294 96.6
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 3.4e-160 568.5 288 96.9
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.9e-155 552.7 288 94.1
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 7.1e-150 534.3 288 90.3
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.3e-148 530.0 284 90.8
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 5.7e-147 524.6 288 89.9
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 9.7e-147 523.9 291 89.3
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 1.3e-146 523.5 288 87.8
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 1.3e-146 523.5 302 86.4
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 5.0e-143 511.5 290 86.6
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 1.4e-142 510.0 289 86.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 6.1e-141 504.6 281 86.8
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 4.3e-139 498.4 290 83.8
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 7.4e-139 497.7 290 83.8
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 7.4e-139 497.7 283 84.8
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.7e-138 496.5 285 82.8
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 3.6e-133 478.8 284 81.3
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 4.7e-133 478.4 284 81.3
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 6.1e-133 478.0 281 80.1
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 1.8e-132 476.5 290 81.7
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 2.3e-132 476.1 287 78.7
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 5.1e-132 474.9 278 80.6
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 6.7e-132 474.6 280 81.1
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 4.4e-131 471.9 285 77.9
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 7.4e-131 471.1 281 80.1
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 7.4e-131 471.1 286 78.0
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 9.7e-131 470.7 286 77.6
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 9.7e-131 470.7 285 79.6
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.3e-130 470.3 284 78.9
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.7e-130 469.9 285 79.6
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.7e-130 469.9 280 79.6
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 2.2e-130 469.5 309 74.1
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 3.7e-130 468.8 286 77.6
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 3.7e-130 468.8 286 77.3
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 3.7e-130 468.8 284 79.6
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 4.8e-130 468.4 286 77.6
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 6.3e-130 468.0 280 80.0
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 6.3e-130 468.0 286 78.7
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 8.2e-130 467.6 286 78.3
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.1e-129 467.2 285 77.9
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 1.1e-129 467.2 278 79.5
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 3.1e-129 465.7 280 78.9
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 4.1e-129 465.3 300 75.3
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 5.3e-129 464.9 278 80.2
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 5.3e-129 464.9 282 77.3
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 7.0e-129 464.5 283 74.9
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 9.1e-129 464.2 278 79.5
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 9.1e-129 464.2 284 78.5
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 9.1e-129 464.2 278 79.9
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 9.1e-129 464.2 311 72.7
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 1.2e-128 463.8 283 75.3
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 1.2e-128 463.8 283 75.3
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.2e-128 463.8 284 77.5
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 2.0e-128 463.0 284 76.8
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 2.0e-128 463.0 284 78.2
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 2.6e-128 462.6 282 77.7
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 3.5e-128 462.2 306 73.9
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 3.5e-128 462.2 284 78.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 3.5e-128 462.2 284 77.5
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 7.7e-128 461.1 290 77.2
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.0e-127 460.7 282 78.0
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 1.0e-127 460.7 282 78.0
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.3e-127 460.3 282 78.4
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 2.2e-127 459.5 284 76.4
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.9e-127 459.1 281 76.9
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 3.8e-127 458.8 278 78.8
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 5.0e-127 458.4 278 75.5
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 6.5e-127 458.0 278 75.5
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 6.5e-127 458.0 288 74.7
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 4.2e-126 455.3 284 77.5
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 4.2e-126 455.3 283 74.9
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 9.4e-126 454.1 284 76.4
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.6e-125 453.4 284 76.4
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 2.1e-125 453.0 296 75.0
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 2.1e-125 453.0 283 73.5
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 2.1e-125 453.0 283 73.5
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 2.7e-125 452.6 283 73.1
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 4.7e-125 451.8 284 73.9
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 6.1e-125 451.4 272 79.4
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 5.2e-124 448.4 315 69.5
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 6.7e-124 448.0 285 76.1
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.7e-122 443.4 280 76.1
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 3.7e-122 442.2 289 74.4
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 3.7e-122 442.2 283 76.3
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 4.1e-121 438.7 306 76.8
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.6e-120 436.8 282 74.1
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 2.6e-120 436.0 286 73.8
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.2e-119 433.0 259 79.2
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 2.9e-119 432.6 279 76.3
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 8.5e-119 431.0 285 71.9
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.9e-118 429.9 282 72.7
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 7.2e-118 427.9 286 72.4
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 9.4e-118 427.6 283 70.7
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.6e-117 426.8 315 65.7
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 2.3e-116 422.9 303 69.6
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.2e-115 420.6 278 72.3
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 3.7e-114 415.6 283 70.0
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 1.2e-112 410.6 282 69.5
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 2.0e-112 409.8 289 70.6
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.7e-112 409.5 220 90.5
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 3.2e-110 402.5 243 78.2
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 5.5e-110 401.7 281 69.0
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.6e-109 400.2 310 64.8
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 3.6e-109 399.1 285 68.1
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 4.4e-107 392.1 246 75.6
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 6.3e-106 388.3 366 56.8
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 2.7e-104 382.9 219 84.0
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 1.4e-100 370.5 226 77.4
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.5e-99 367.1 285 60.0
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.2e-98 363.2 283 63.6
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.8e-93 346.3 204 79.4
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 3.4e-91 339.3 291 56.7
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 6.4e-90 335.1 190 82.1
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 7.0e-89 331.6 279 58.4
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 8.0e-85 318.2 228 69.3
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 6.4e-82 308.5 189 75.7
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 6.4e-82 308.5 189 75.7
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 7.8e-80 301.6 229 65.5
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 7.3e-78 295.0 233 61.4
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 8.9e-76 288.1 287 50.5
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 2.1e-64 250.4 298 50.3
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.5e-64 249.6 190 64.2
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 9.6e-62 241.5 151 71.5
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 9.6e-62 241.5 156 75.6
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 2.2e-58 230.3 219 50.7
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.0e-55 221.5 131 76.3
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.9e-55 219.5 271 47.2
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 1.5e-43 181.0 246 45.9
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 2.5e-38 163.7 281 38.1
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.6e-37 161.0 105 75.2
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 4.1e-36 156.4 218 40.4
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 3.1e-28 130.2 111 60.4
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 3.4e-27 126.7 91 65.9
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 2.6e-14 84.0 67 61.2
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 6.3e-13 79.3 46 82.6
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 8.2e-13 79.0 45 82.2


User provided reference genes

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