Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p27320 Brassica napus HOM05D003229 ORTHO05D003835 0.0e+00 1194.1 651 100.0
BraA03t11943Z Brassica rapa HOM05D003229 ORTHO05D003835 0.0e+00 1165.2 651 95.9
C03p32850 Brassica napus HOM05D003229 ORTHO05D003835 7.3e-281 970.3 658 81.2
BolC3t15620H Brassica oleracea HOM05D003229 ORTHO05D003835 1.2e-278 963.0 654 81.8
BcaB01g02976 Brassica carinata HOM05D003229 ORTHO05D003835 1.7e-229 799.7 691 69.5
AL5G21520 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 7.5e-60 236.1 423 41.4
AT3G43590 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 2.9e-59 234.2 421 41.1
C03p68590 Brassica napus HOM05D003229 ORTHO05D003835 2.3e-56 224.6 450 39.8
BolC3t19117H Brassica oleracea HOM05D003229 ORTHO05D003835 1.5e-55 221.9 449 39.6
BraA06t25329Z Brassica rapa HOM05D003229 ORTHO05D003835 2.9e-51 207.6 449 38.5
A06p22470 Brassica napus HOM05D003229 ORTHO05D003835 8.4e-51 206.1 443 38.1
A06p22530 Brassica napus HOM05D003229 ORTHO05D003835 8.4e-51 206.1 443 38.1
Sp5g17570 Schrenkiella parvula HOM05D003229 ORTHO05D003835 2.7e-49 201.1 459 37.7
Thhalv10020505m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 4.9e-43 180.3 407 36.6
Thhalv10023543m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 2.4e-42 177.9 402 35.8
AL5G21420 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 4.2e-42 177.2 235 46.4
Carub.0005s0931 Capsella rubella HOM05D003229 ORTHO05D003835 1.2e-41 175.6 426 37.6
C08p40280 Brassica napus HOM05D003229 ORTHO05D003835 1.0e-40 172.6 288 42.0
BolC8t51596H Brassica oleracea HOM05D003229 ORTHO05D003835 1.0e-40 172.6 288 42.0
BcaC07g41025 Brassica carinata HOM05D003229 ORTHO05D003835 1.1e-39 169.1 285 41.1
Carub.0005s0918 Capsella rubella HOM05D003229 ORTHO05D003835 5.6e-39 166.8 195 47.7
CARHR267130 Cardamine hirsuta HOM05D003229 ORTHO05D003835 1.3e-38 165.6 179 49.2
CARHR287360 Cardamine hirsuta HOM05D003229 ORTHO05D003835 1.3e-38 165.6 412 35.9
Aa31LG4G13390 Aethionema arabicum HOM05D003229 ORTHO05D003835 2.4e-37 161.4 193 48.2
A09p57240 Brassica napus HOM05D003229 ORTHO05D003835 4.0e-37 160.6 325 40.3
Thhalv10019590m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 6.9e-37 159.8 283 42.0
BraA09t41117Z Brassica rapa HOM05D003229 ORTHO05D003835 2.2e-35 154.8 321 39.3
Sp4g01780 Schrenkiella parvula HOM05D003229 ORTHO05D003835 4.2e-34 150.6 185 45.9
THA.LOC104799740 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 5.4e-34 150.2 362 35.1
THA.LOC104810972 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 1.3e-30 139.0 321 36.1
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 5.3e-29 133.7 266 35.3
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 9.3e-26 122.9 165 38.2
Lsat_1_v5_gn_0_39260 Lactuca sativa HOM05D003229 ORTHO05D003835 9.3e-26 122.9 170 41.8
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 1.6e-25 122.1 162 42.0
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 3.5e-25 120.9 175 40.0
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 3.5e-25 120.9 374 29.4
Manes.04G063962 Manihot esculenta HOM05D003229 ORTHO05D003835 7.9e-25 119.8 161 41.0
PSO384G4356 Papaver somniferum HOM05D003229 ORTHO05D003835 2.3e-24 118.2 192 36.5
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 2.3e-24 118.2 162 41.4
PSO339G4047 Papaver somniferum HOM05D003229 ORTHO05D003835 3.9e-24 117.5 192 36.5
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 3.9e-24 117.5 386 28.5
DCAR_012260 Daucus carota HOM05D003229 ORTHO05D003835 1.9e-23 115.2 180 37.8
Sed0019248 Sechium edule HOM05D003229 ORTHO05D003835 3.3e-23 114.4 166 35.5
Thhalv10002168m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 4.3e-23 114.0 326 30.4
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 5.6e-23 113.6 266 33.5
EL10Ac5g11782 Beta vulgaris HOM05D003229 ORTHO05D003835 7.4e-23 113.2 151 38.4
Eucgr.J00598 Eucalyptus grandis HOM05D003229 ORTHO05D003835 8.2e-22 109.8 162 35.8
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 1.8e-21 108.6 377 27.6
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.8e-21 108.6 75 54.7
Thhalv10002930m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.8e-21 108.6 337 30.9
Sed0028007 Sechium edule HOM05D003229 ORTHO05D003835 2.4e-21 108.2 169 37.3
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 4.0e-21 107.5 342 28.1
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 5.3e-21 107.1 115 41.7
LjContig00564g0024504 Lotus japonicus HOM05D003229 ORTHO05D003835 5.3e-21 107.1 161 38.5
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 6.9e-21 106.7 155 38.7
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 9.0e-21 106.3 100 50.0
Lj6g0007817 Lotus japonicus HOM05D003229 ORTHO05D003835 1.2e-20 105.9 191 36.1
PGR119G2320 Punica granatum HOM05D003229 ORTHO05D003835 1.2e-20 105.9 173 32.9
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 1.5e-20 105.5 206 32.5
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 3.4e-20 104.4 326 30.7
Cpa.g.sc103.35 Carica papaya HOM05D003229 ORTHO05D003835 4.5e-20 104.0 166 38.0
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 7.6e-20 103.2 372 28.5
Lalb_Chr17g0347381 Lupinus albus HOM05D003229 ORTHO05D003835 7.6e-20 103.2 170 35.9
Ah.08g222380 Amaranthus hybridus HOM05D003229 ORTHO05D003835 1.0e-19 102.8 174 38.5
Potri.016G063800 Populus trichocarpa HOM05D003229 ORTHO05D003835 1.0e-19 102.8 214 32.2
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.3e-19 102.4 98 49.0
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 1.7e-19 102.1 266 32.0
Dinv32144 Davidia involucrata HOM05D003229 ORTHO05D003835 2.2e-19 101.7 162 38.3
Gohir.D04G093700 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.2e-19 101.7 117 40.2
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 3.8e-19 100.9 181 37.6
SEGI_34455 Sequoiadendron giganteum HOM05D003229 ORTHO05D003835 6.5e-19 100.1 173 30.6
AUR62036294 Chenopodium quinoa HOM05D003229 ORTHO05D003835 1.1e-18 99.4 99 46.5
ECA238G1805 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-18 99.4 134 41.0
Oeu058180.2 Olea europaea HOM05D003229 ORTHO05D003835 1.4e-18 99.0 182 33.5
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 1.4e-18 99.0 75 52.0
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 1.9e-18 98.6 139 40.3
HanXRQChr05g0137001 Helianthus annuus HOM05D003229 ORTHO05D003835 2.5e-18 98.2 165 37.0
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 2.5e-18 98.2 190 34.2
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 3.2e-18 97.8 190 34.2
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 7.1e-18 96.7 131 36.6
Psat2g023800 Pisum sativum HOM05D003229 ORTHO05D003835 9.3e-18 96.3 143 38.5
PGSC0003DMG400002995 Solanum tuberosum HOM05D003229 ORTHO05D003835 9.3e-18 96.3 172 34.9
Gohir.D13G092701 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.1e-17 95.1 369 29.0
Gohir.A13G089500 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.7e-17 94.7 158 32.3
Solyc06g073810.4 Solanum lycopersicum HOM05D003229 ORTHO05D003835 3.5e-17 94.4 181 34.8
CANSAT54G2724 Cannabis sativa HOM05D003229 ORTHO05D003835 4.6e-17 94.0 190 31.6
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 4.6e-17 94.0 369 28.7
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 6.0e-17 93.6 155 33.5
MELO3C017380.2 Cucumis melo HOM05D003229 ORTHO05D003835 6.0e-17 93.6 168 34.5
Gohir.D13G092751 Gossypium hirsutum HOM05D003229 ORTHO05D003835 6.0e-17 93.6 121 38.0
Gorai.010G139800 Gossypium raimondii HOM05D003229 ORTHO05D003835 6.0e-17 93.6 121 38.0
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 7.9e-17 93.2 162 35.2
Sopen11g029360 Solanum pennellii HOM05D003229 ORTHO05D003835 7.9e-17 93.2 144 36.8
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 1.0e-16 92.8 149 36.9
MBI05_g37661_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 1.3e-16 92.4 82 50.0
Phvul.006G006900 Phaseolus vulgaris HOM05D003229 ORTHO05D003835 1.3e-16 92.4 160 34.4
Atru.chr8.1245 Acer truncatum HOM05D003229 ORTHO05D003835 1.8e-16 92.0 125 40.8
AT5G36240 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 1.8e-16 92.0 79 50.6
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 2.3e-16 91.7 369 28.5
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 3.0e-16 91.3 146 34.9
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 3.9e-16 90.9 138 37.0
Nitab4.5_0002595g0030 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.9e-16 90.9 96 40.6
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.9e-16 90.9 160 35.0
CDE05G3619 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 5.1e-16 90.5 180 35.6
Ciclev10011928m.g Citrus clementina HOM05D003229 ORTHO05D003835 5.1e-16 90.5 150 38.0
Hund15039 Selenicereus undatus HOM05D003229 ORTHO05D003835 5.1e-16 90.5 97 41.2
Solyc11g071690.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 5.1e-16 90.5 151 35.1
TWI74G0877 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 6.7e-16 90.1 148 37.8
Nitab4.5_0000117g0180 Nicotiana tabacum HOM05D003229 ORTHO05D003835 8.7e-16 89.7 96 40.6
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 8.7e-16 89.7 160 33.8
ClCG06G014150 Citrullus lanatus HOM05D003229 ORTHO05D003835 1.5e-15 89.0 140 37.9
VMungo0540G0117 Vigna mungo HOM05D003229 ORTHO05D003835 1.5e-15 89.0 181 32.0
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 2.5e-15 88.2 401 25.4
Solyc01g056760.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 2.5e-15 88.2 110 39.1
AL7G45170 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 3.3e-15 87.8 86 47.7
MSTRG.26568 Avicennia marina HOM05D003229 ORTHO05D003835 3.3e-15 87.8 165 34.5
MBI11_g25050_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 5.7e-15 87.0 113 38.1
HanXRQChr03g0089231 Helianthus annuus HOM05D003229 ORTHO05D003835 7.4e-15 86.7 200 29.0
Ah.12g059520 Amaranthus hybridus HOM05D003229 ORTHO05D003835 1.3e-14 85.9 161 33.5
Glyma.13G028000 Glycine max HOM05D003229 ORTHO05D003835 1.3e-14 85.9 136 34.6
EL10Ac7g16254 Beta vulgaris HOM05D003229 ORTHO05D003835 1.6e-14 85.5 130 37.7
ECA240G3284 Erigeron canadensis HOM05D003229 ORTHO05D003835 2.2e-14 85.1 134 35.1
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 2.8e-14 84.7 341 27.3
TPR.G15596 Trifolium pratense HOM05D003229 ORTHO05D003835 6.3e-14 83.6 172 30.2
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 1.1e-13 82.8 162 33.3
CBR_g8477 Chara braunii HOM05D003229 ORTHO05D000407 1.8e-13 82.0 170 29.4
Gorai.009G396300 Gossypium raimondii HOM05D003229 ORTHO05D003835 2.4e-13 81.6 96 38.5
Sabra09G0121900 Salix brachista HOM05D003229 ORTHO05D003835 2.4e-13 81.6 133 35.3
Hma1.2p1_0127F.1_g059620 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 5.3e-13 80.5 131 34.4
Lalb_Chr13g0294131 Lupinus albus HOM05D003229 ORTHO05D003835 5.3e-13 80.5 175 29.7
vmacro04054 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 5.3e-13 80.5 177 30.5
MD03G1161300 Malus domestica HOM05D003229 ORTHO05D003835 6.9e-13 80.1 169 32.0
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 6.9e-13 80.1 118 36.4
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 3.4e-12 77.8 98 41.8
CSS0045009 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 5.9e-12 77.0 428 24.8
AUR62038407 Chenopodium quinoa HOM05D003229 ORTHO05D003835 5.9e-12 77.0 71 45.1
Potri.009G155500 Populus trichocarpa HOM05D003229 ORTHO05D003835 5.9e-12 77.0 221 29.9
Thecc.05G214900 Theobroma cacao HOM05D003229 ORTHO05D003835 3.8e-11 74.3 378 25.1
Oeu047795.1 Olea europaea HOM05D003229 ORTHO05D003835 6.5e-11 73.6 55 56.4
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 1.1e-10 72.8 172 30.8
ATR0697G070 Amborella trichopoda HOM05D003229 ORTHO05D003835 1.9e-10 72.0 191 27.2
CDE01G0204 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 1.9e-10 72.0 180 29.4
PGSC0003DMG400005910 Solanum tuberosum HOM05D003229 ORTHO05D003835 1.9e-10 72.0 155 31.6
Glyma.20G055200 Glycine max HOM05D003229 ORTHO05D003835 4.2e-10 70.9 162 28.4
DCAR_022907 Daucus carota HOM05D003633 ORTHO05D004245 7.2e-10 70.1 131 32.8
Sopen06g030210 Solanum pennellii HOM05D003229 ORTHO05D003835 9.4e-10 69.7 155 30.3
Peaxi162Scf00355g00005 Petunia axillaris HOM05D003229 ORTHO05D003835 1.2e-09 69.3 144 34.7
Sabra04G0131600 Salix brachista HOM05D003229 ORTHO05D003835 1.2e-09 69.3 137 34.3
AUR62020197 Chenopodium quinoa HOM05D003229 ORTHO05D003835 3.6e-09 67.8 288 28.5
SGA_v2.0_scaffold392G50668 Striga asiatica HOM05D003229 ORTHO05D003835 3.6e-09 67.8 156 27.6
AUR62001585 Chenopodium quinoa HOM05D003229 ORTHO05D003835 6.1e-09 67.0 284 28.5
Thecc.05G181700 Theobroma cacao HOM05D003229 ORTHO05D003835 6.1e-09 67.0 109 37.6
Prupe.6G179900 Prunus persica HOM05D003229 ORTHO05D003835 1.8e-08 65.5 76 39.5
RcHm_v2.0_Chr6g0255381 Rosa chinensis HOM05D003229 ORTHO05D003835 5.7e-07 60.5 160 28.8
Haze_22516 Corylus avellana HOM05D003229 ORTHO05D017800 7.4e-07 60.1 129 29.5
Mapoly0019s0115 Marchantia polymorpha HOM05D003229 ORTHO05D003835 7.4e-07 60.1 56 50.0
CsaV3_1G004530 Cucumis sativus L. HOM05D003229 ORTHO05D003835 9.7e-07 59.7 162 26.5
Psat5g107520 Pisum sativum HOM05D003229 ORTHO05D003835 1.7e-06 58.9 58 43.1
vmacro14302 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 6.3e-06 57.0 191 28.3


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