Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p21690 Brassica napus HOM05D001004 ORTHO05D000653 1.9e-22 108.2 51 100.0
BraA03t11404Z Brassica rapa HOM05D001004 ORTHO05D000653 1.9e-22 108.2 51 100.0
BcaB01g03622 Brassica carinata HOM05D001004 ORTHO05D000653 1.2e-13 79.0 71 59.2
Sp4g21250 Schrenkiella parvula HOM05D001004 ORTHO05D000653 2.3e-12 74.7 71 57.7
CARHR133600 Cardamine hirsuta HOM05D001004 ORTHO05D000653 3.0e-12 74.3 71 54.9
BcaB07g30343 Brassica carinata HOM05D001004 ORTHO05D000653 6.6e-12 73.2 73 57.5
BcaC02g07440 Brassica carinata HOM05D001004 ORTHO05D000653 1.1e-11 72.4 71 54.9
Carub.0004s2089 Capsella rubella HOM05D001004 ORTHO05D000653 1.1e-11 72.4 71 56.3
THA.LOC104824172 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 9.6e-11 69.3 71 52.1
AT2G38870 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 1.3e-10 68.9 71 53.5
C03p25690 Brassica napus HOM05D001004 ORTHO05D000653 1.3e-10 68.9 65 60.0
Thhalv10017502m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 1.3e-10 68.9 71 53.5
AL4G36170 Arabidopsis lyrata HOM05D001004 ORTHO05D000653 2.1e-10 68.2 71 53.5
BraA04t18431Z Brassica rapa HOM05D001004 ORTHO05D000653 3.6e-10 67.4 65 58.5
Carub.0004s2090 Capsella rubella HOM05D001004 ORTHO05D000653 8.1e-10 66.2 72 52.8
A04p14760 Brassica napus HOM05D001004 ORTHO05D000653 1.1e-09 65.9 37 78.4
THA.LOC109117082 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 1.4e-09 65.5 67 53.7
A04p29640 Brassica napus HOM05D001004 ORTHO05D000653 4.0e-09 63.9 65 53.8
C04p66930 Brassica napus HOM05D001004 ORTHO05D000653 4.0e-09 63.9 65 53.8
BolC4t28194H Brassica oleracea HOM05D001004 ORTHO05D000653 4.0e-09 63.9 65 53.8
BraA04t18430Z Brassica rapa HOM05D001004 ORTHO05D000653 4.0e-09 63.9 65 53.8
BcaC03g17566 Brassica carinata HOM05D001004 ORTHO05D000653 3.8e-07 57.4 48 60.4
BraA04t17113Z Brassica rapa HOM05D001004 ORTHO05D000653 4.9e-07 57.0 67 52.2
Carub.0004s2093 Capsella rubella HOM05D001004 ORTHO05D000653 6.4e-07 56.6 69 49.3
HanXRQChr01g0014531 Helianthus annuus HOM05D001004 ORTHO05D000653 6.4e-07 56.6 71 45.1
QL06p015886 Quercus lobata HOM05D001004 ORTHO05D000653 8.4e-07 56.2 70 45.7
HanXRQChr01g0014511 Helianthus annuus HOM05D001004 ORTHO05D000653 1.1e-06 55.8 34 73.5
MBI04_g22607_MAGBIO Magnolia biondii HOM05D001004 ORTHO05D000653 1.1e-06 55.8 40 62.5
Migut.D00399 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.4e-06 55.5 71 43.7
Gohir.D05G296000 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.4e-06 55.5 47 55.3
Gorai.009G312600 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.4e-06 55.5 47 55.3
Aa31LG5G20810 Aethionema arabicum HOM05D001004 ORTHO05D000653 1.9e-06 55.1 66 47.0
Manes.05G086331 Manihot esculenta HOM05D001004 ORTHO05D000653 1.9e-06 55.1 70 40.0
TAR636G3448 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.9e-06 55.1 71 45.1
Migut.N02177 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.4e-06 54.7 37 62.2
AL4G36210 Arabidopsis lyrata HOM05D001004 ORTHO05D000653 3.2e-06 54.3 69 47.8
CARHR133590 Cardamine hirsuta HOM05D001004 ORTHO05D000653 3.2e-06 54.3 69 47.8
AUR62011909 Chenopodium quinoa HOM05D001004 ORTHO05D000653 3.2e-06 54.3 72 43.1
AUR62032224 Chenopodium quinoa HOM05D001004 ORTHO05D000653 4.2e-06 53.9 71 42.3
Dinv44643 Davidia involucrata HOM05D001004 ORTHO05D000653 4.2e-06 53.9 71 40.8
Hma1.2p1_0310F.1_g120940 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 5.4e-06 53.5 71 42.3
PSO339G6102 Papaver somniferum HOM05D001004 ORTHO05D000653 5.4e-06 53.5 37 62.2
HanXRQChr01g0014521 Helianthus annuus HOM05D001004 ORTHO05D000653 7.1e-06 53.1 37 64.9
AT2G38900 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 9.3e-06 52.8 65 49.2
CiPaw.04G183700 Carya illinoinensis HOM05D001004 ORTHO05D000653 9.3e-06 52.8 37 62.2
MD13G1208300 Malus domestica HOM05D001004 ORTHO05D000653 9.3e-06 52.8 71 45.1
GSVIVG01018137001 Vitis vinifera HOM05D001004 ORTHO05D000653 9.3e-06 52.8 72 43.1
GSVIVG01018139001 Vitis vinifera HOM05D001004 ORTHO05D000653 9.3e-06 52.8 72 43.1


User provided reference genes

Program Settings