Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 3.6e-112 408.3 213 100.0
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 8.1e-96 354.0 217 89.4
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 4.9e-85 318.2 213 81.2
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 2.7e-83 312.4 218 79.8
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 7.4e-81 304.3 219 77.2
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.6e-75 286.6 217 75.1
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 2.1e-75 286.2 213 75.1
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 1.0e-74 283.9 213 73.7
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 1.8e-74 283.1 225 72.4
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 6.7e-74 281.2 224 71.4
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 3.2e-68 262.3 161 85.1
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 1.9e-60 236.5 227 61.2
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.7e-59 232.6 200 64.5
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.0e-55 218.0 162 70.4
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.0e-55 218.0 162 70.4
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.2e-54 217.2 162 69.8
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.6e-54 216.1 245 55.9
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.6e-54 216.1 162 69.8
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 7.7e-54 214.5 140 75.0
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 1.0e-53 214.2 154 70.8
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 1.0e-53 214.2 212 58.5
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 1.3e-53 213.8 152 72.4
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 5.0e-53 211.8 147 70.1
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 1.1e-52 210.7 162 70.4
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 4.2e-52 208.8 135 77.0
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 5.5e-52 208.4 170 62.9
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 7.2e-52 208.0 127 78.7
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 7.2e-52 208.0 164 64.6
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 1.2e-51 207.2 214 57.5
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 2.7e-51 206.1 128 78.9
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 4.7e-51 205.3 155 69.7
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 4.7e-51 205.3 210 53.8
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 8.0e-51 204.5 164 64.6
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.0e-51 204.5 164 64.0
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.0e-51 204.5 164 64.6
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 1.0e-50 204.1 127 78.0
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.4e-50 203.8 166 63.9
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 2.3e-50 203.0 162 64.2
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.0e-50 202.6 211 55.0
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 3.0e-50 202.6 164 67.1
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.0e-50 202.2 164 64.0
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 4.0e-50 202.2 211 54.5
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 4.0e-50 202.2 172 63.4
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 6.7e-50 201.4 162 63.6
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 1.1e-49 200.7 169 59.2
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 2.0e-49 199.9 192 55.2
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 3.3e-49 199.1 203 56.7
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 3.3e-49 199.1 155 64.5
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 5.7e-49 198.4 170 61.8
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 5.7e-49 198.4 124 79.0
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 5.7e-49 198.4 154 64.3
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 5.7e-49 198.4 152 68.4
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 7.5e-49 198.0 133 72.2
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 1.7e-48 196.8 221 52.0
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 2.8e-48 196.1 149 67.1
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 2.8e-48 196.1 125 75.2
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 3.7e-48 195.7 170 61.2
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 4.8e-48 195.3 139 68.3
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 4.8e-48 195.3 153 64.7
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 4.8e-48 195.3 202 51.5
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 4.8e-48 195.3 141 67.4
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 8.2e-48 194.5 158 65.8
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 1.1e-47 194.1 190 57.4
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 3.1e-47 192.6 180 57.8
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 2.0e-46 189.9 125 72.8
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.0e-45 187.6 167 59.9
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 5.0e-45 185.3 169 59.2
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.1e-44 184.1 115 79.1
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.1e-44 184.1 118 73.7
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.5e-44 183.7 132 65.9
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 2.1e-43 179.9 120 74.2
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 8.0e-43 177.9 146 59.6
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.5e-41 173.7 137 65.0
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 3.7e-40 169.1 148 57.4
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 2.7e-38 162.9 145 58.6
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 7.7e-38 161.4 101 73.3
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 1.0e-37 161.0 99 73.7
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 8.5e-37 157.9 134 59.7
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 1.6e-35 153.7 92 81.5
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 2.1e-35 153.3 124 59.7
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 8.0e-35 151.4 94 77.7
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 8.0e-35 151.4 109 67.9
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 8.8e-34 147.9 115 62.6
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 2.0e-33 146.7 171 50.3
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.2e-32 143.3 83 85.5
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 3.1e-31 139.4 127 55.1
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 3.1e-31 139.4 92 75.0
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 7.0e-31 138.3 124 60.5
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 9.2e-31 137.9 83 80.7
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.7e-30 136.3 94 73.4
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 3.5e-30 136.0 101 72.3
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.5e-28 129.8 164 48.2
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.6e-27 127.1 162 49.4
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 3.6e-27 125.9 101 61.4
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 3.4e-25 119.4 86 67.4
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 5.7e-25 118.6 69 79.7
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.7e-22 109.8 80 66.2
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 3.9e-21 105.9 92 62.0
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.5e-20 104.0 164 42.1
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 2.2e-16 90.1 128 43.8
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 6.4e-16 88.6 49 83.7
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 6.4e-16 88.6 70 65.7
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 1.6e-14 84.0 64 62.5
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 3.0e-13 79.7 124 41.9
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 5.6e-12 75.5 123 35.8
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 7.3e-12 75.1 91 52.7
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 1.4e-10 70.9 169 28.4
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 1.4e-10 70.9 118 33.9
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 1.4e-10 70.9 198 27.8
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 1.8e-10 70.5 124 33.9
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 6.8e-10 68.6 188 28.2
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 6.8e-10 68.6 120 33.3
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 8.9e-10 68.2 112 33.9
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 1.2e-09 67.8 123 35.0
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 1.5e-09 67.4 126 31.7
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 1.5e-09 67.4 126 32.5
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 2.6e-09 66.6 124 34.7
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 3.4e-09 66.2 124 33.9
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 4.4e-09 65.9 124 34.7
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 7.5e-09 65.1 202 28.7
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 7.5e-09 65.1 126 32.5
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 1.3e-08 64.3 116 33.6
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 1.3e-08 64.3 122 34.4
Nn1g02040 Nelumbo nucifera HOM05D009116 ORTHO05D011299 3.7e-08 62.8 118 33.1
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 1.9e-07 60.5 213 27.2
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 2.4e-07 60.1 124 31.5
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 3.2e-07 59.7 121 32.2
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 3.2e-07 59.7 124 31.5
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-06 56.6 88 46.6


User provided reference genes

Program Settings