Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 9.7e-131 471.5 589 100.0
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 2.5e-126 456.8 589 92.0
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 1.1e-121 441.4 589 86.6
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 1.1e-121 441.4 589 86.6
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 1.3e-114 417.9 586 85.0
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 5.2e-92 342.8 228 86.0
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 7.7e-88 328.9 222 83.8
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 5.4e-81 306.2 228 79.4
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 1.2e-77 295.0 212 78.8
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.3e-74 285.0 229 73.8
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 5.0e-71 273.1 231 69.3
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 6.0e-64 249.6 172 80.8
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 7.3e-62 242.7 206 68.4
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.8e-36 158.3 250 46.4
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 1.5e-30 138.7 237 42.2
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.9e-30 138.3 239 42.7
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 8.1e-29 132.9 228 43.4
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 8.1e-29 132.9 253 40.7
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.8e-28 131.7 239 41.0
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 3.1e-28 131.0 233 42.5
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 4.0e-28 130.6 244 40.6
BolC3t14925H Brassica oleracea HOM05D006830 ORTHO05D008119 5.3e-28 130.2 105 75.2
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 2.2e-26 124.8 239 39.7
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 4.9e-26 123.6 246 39.8
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 6.5e-26 123.2 257 38.1
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 1.1e-25 122.5 243 40.7
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.5e-25 121.3 258 38.8
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.1e-25 119.8 241 39.0
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.2e-24 119.0 246 37.8
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.2e-24 119.0 246 37.8
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 1.6e-24 118.6 259 39.8
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 3.5e-24 117.5 259 36.7
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 1.0e-23 115.9 249 37.8
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.9e-23 114.0 246 38.2
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 3.9e-23 114.0 233 37.3
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 6.7e-23 113.2 261 35.6
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 6.7e-23 113.2 258 36.8
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 8.7e-23 112.8 256 35.9
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 8.7e-23 112.8 236 40.7
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 1.9e-22 111.7 238 37.0
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 3.3e-22 110.9 262 34.0
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 3.3e-22 110.9 266 36.1
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 3.3e-22 110.9 226 37.6
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 9.6e-22 109.4 209 42.1
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.3e-21 109.0 259 34.7
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 6.2e-21 106.7 263 36.1
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 6.2e-21 106.7 236 38.1
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.8e-20 105.1 246 35.8
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 1.8e-20 105.1 254 35.0
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 6.9e-20 103.2 265 37.0
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 6.9e-20 103.2 208 40.4
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 5.8e-19 100.1 210 40.0
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 7.6e-19 99.8 239 35.1
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.0e-18 99.4 214 37.4
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 1.0e-18 99.4 263 35.0
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 1.0e-18 99.4 233 36.5
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 1.3e-18 99.0 264 33.3
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.3e-18 99.0 246 36.6
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.7e-18 98.6 251 33.9
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 2.9e-18 97.8 180 41.7
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.9e-18 97.8 233 37.3
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 6.5e-18 96.7 241 34.0
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 3.2e-17 94.4 214 37.4
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 7.1e-17 93.2 260 31.5
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 7.1e-17 93.2 172 43.6
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 9.3e-17 92.8 204 37.3
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 9.3e-17 92.8 232 36.2
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 4.6e-16 90.5 248 35.1
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 6.1e-16 90.1 168 41.7
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 6.1e-16 90.1 168 38.7
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 7.9e-16 89.7 189 38.1
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 7.9e-16 89.7 259 33.6
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 1.0e-15 89.4 257 32.7
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 1.1e-14 85.9 178 38.8
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 9.7e-14 82.8 107 51.4
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 2.8e-13 81.3 260 30.8
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 2.8e-13 81.3 259 34.4
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 3.7e-13 80.9 256 29.3
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 4.8e-13 80.5 273 33.3
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 4.8e-13 80.5 200 34.5
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.8e-12 78.6 270 30.7
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 4.1e-12 77.4 243 32.5
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.2e-11 75.9 297 29.6
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 1.2e-11 75.9 244 34.0
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 1.5e-11 75.5 266 30.1
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 2.6e-11 74.7 264 29.5
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 3.4e-11 74.3 264 29.5
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 4.5e-11 73.9 320 28.8
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 7.7e-11 73.2 176 36.9
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 2.2e-10 71.6 203 33.5
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 3.8e-10 70.9 288 30.2
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 3.2e-09 67.8 209 32.5
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 9.4e-09 66.2 140 36.4
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 1.2e-08 65.9 140 36.4
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 3.6e-08 64.3 154 33.1
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 3.6e-08 64.3 250 29.6
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.0e-07 62.8 227 30.0
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.8e-07 62.0 88 45.5
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 3.9e-07 60.8 65 56.9
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 6.7e-07 60.1 203 35.0
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 6.7e-07 60.1 216 31.0
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 8.8e-07 59.7 87 42.5
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 2.5e-06 58.2 173 31.2
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.5e-06 58.2 87 44.8


User provided reference genes

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