Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.2e-176 623.2 353 100.0
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.7e-162 576.2 356 93.5
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 4.3e-158 561.6 351 92.6
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 5.6e-158 561.2 351 92.3
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 8.0e-157 557.4 354 88.1
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 9.8e-155 550.4 324 91.4
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 9.6e-126 454.1 333 77.8
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.1e-113 414.1 331 72.2
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 3.1e-108 396.0 325 68.3
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 5.3e-108 395.2 327 70.6
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 6.4e-106 388.3 258 81.4
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 7.6e-91 338.2 323 65.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 9.4e-73 278.1 318 54.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.0e-67 260.4 245 59.6
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 7.7e-67 258.5 251 59.4
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 8.5e-66 255.0 197 67.0
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 8.5e-66 255.0 220 62.3
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.1e-65 254.6 189 71.4
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.9e-65 253.8 239 60.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 3.2e-65 253.1 171 75.4
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 7.2e-65 251.9 252 59.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 9.4e-65 251.5 218 62.4
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.2e-64 251.1 188 70.7
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.6e-64 250.8 252 59.1
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 2.1e-64 250.4 218 62.8
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.7e-64 250.0 233 60.9
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 4.7e-64 249.2 257 56.4
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.0e-63 248.1 256 56.2
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.0e-63 248.1 304 50.0
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.8e-63 247.3 337 47.5
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 2.3e-63 246.9 316 49.7
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.3e-63 246.9 188 68.1
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 4.0e-63 246.1 214 63.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 4.0e-63 246.1 191 66.0
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 4.0e-63 246.1 207 62.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 5.2e-63 245.7 183 68.9
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 6.7e-63 245.4 253 56.9
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.3e-62 243.0 252 56.0
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.3e-62 243.0 246 55.3
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 3.3e-62 243.0 193 66.3
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.4e-62 242.7 246 54.9
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 4.4e-62 242.7 194 65.5
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.7e-62 242.3 204 61.8
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 5.7e-62 242.3 186 67.7
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 9.7e-62 241.5 178 77.5
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.3e-61 241.1 204 61.3
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.7e-61 240.7 246 54.5
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.7e-61 240.7 246 54.1
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.7e-61 240.7 167 72.5
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 2.2e-61 240.4 192 65.6
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.2e-61 240.4 188 66.5
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 3.7e-61 239.6 195 66.2
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 3.7e-61 239.6 240 56.2
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.7e-61 239.6 189 67.7
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.8e-61 239.2 190 66.8
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.3e-61 238.8 204 60.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 6.3e-61 238.8 226 58.8
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 8.2e-61 238.4 210 60.5
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 8.2e-61 238.4 196 64.8
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 8.2e-61 238.4 229 57.2
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-60 238.0 232 56.0
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.1e-60 238.0 298 50.0
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.4e-60 237.7 229 56.8
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.8e-60 237.3 204 61.8
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.8e-60 237.3 261 55.6
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 5.3e-60 235.7 189 64.6
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 7.0e-60 235.3 197 61.4
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-59 233.8 191 63.4
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 2.0e-59 233.8 315 45.4
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 2.7e-59 233.4 191 63.4
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.5e-59 233.0 180 66.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 4.5e-59 232.6 231 55.0
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 4.5e-59 232.6 185 62.7
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 5.9e-59 232.3 172 66.3
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.7e-59 231.9 204 59.8
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.3e-58 231.1 184 64.1
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.7e-58 230.7 169 68.6
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 6.5e-58 228.8 167 70.7
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 6.5e-58 228.8 194 61.9
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.1e-57 228.0 174 67.8
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 2.5e-57 226.9 172 67.4
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.7e-56 223.4 176 63.6
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 5.2e-55 219.2 223 55.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.6e-54 216.9 206 56.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.4e-54 216.5 185 61.1
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.7e-53 214.2 214 55.6
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-53 213.4 166 65.7
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.8e-53 213.4 174 61.5
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.8e-53 212.6 172 62.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 8.3e-53 211.8 194 60.8
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.8e-52 210.7 190 57.9
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 7.7e-51 205.3 249 49.0
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 2.3e-50 203.8 142 71.8
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 2.3e-50 203.8 167 61.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.8e-50 203.0 187 56.7
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.9e-49 200.7 187 56.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.1e-48 197.2 141 70.2
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 6.8e-47 192.2 237 48.5
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.2e-45 187.2 171 54.4
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 8.3e-45 185.3 261 44.8
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.4e-44 183.7 165 60.0
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.1e-40 170.6 134 64.2
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.2e-35 154.8 107 71.0
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.5e-33 147.9 165 46.1
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.1e-31 141.7 136 58.1
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.9e-29 132.9 109 58.7
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.4e-28 130.6 99 69.7
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.2e-28 130.2 102 62.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.2e-28 130.2 87 72.4
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.2e-28 130.2 87 72.4
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 4.1e-28 129.8 98 64.3
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.1e-24 117.5 123 53.7
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 6.2e-24 115.9 174 36.8
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 6.0e-19 99.4 181 30.9
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 3.0e-18 97.1 61 77.0
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.1e-12 78.6 60 58.3
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.3e-10 71.6 172 34.3
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 4.3e-09 66.6 168 31.0
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.8e-07 61.2 55 54.5
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.2e-06 58.5 56 51.8
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 1.5e-06 58.2 82 47.6


User provided reference genes

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