Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 3.6e-71 271.6 144 100.0
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 1.8e-70 269.2 144 99.3
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 2.0e-69 265.8 144 97.2
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 5.7e-69 264.2 144 96.5
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.4e-67 259.6 145 95.9
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 5.0e-65 251.1 144 91.7
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 4.9e-60 234.6 144 86.8
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 2.7e-58 228.8 134 88.1
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 2.5e-56 222.2 134 89.6
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 7.5e-53 210.7 134 85.8
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.4e-51 206.5 129 86.0
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 5.6e-48 194.5 146 73.3
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 3.7e-44 181.8 140 70.0
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 7.1e-35 151.0 129 64.3
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.6e-34 149.8 126 61.1
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 2.1e-34 149.4 128 63.3
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 2.7e-34 149.1 126 60.3
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 6.0e-34 147.9 126 64.3
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 3.0e-33 145.6 121 64.5
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 6.6e-33 144.4 125 60.8
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 5.6e-32 141.4 124 62.9
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 7.3e-32 141.0 129 61.2
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 9.5e-32 140.6 125 59.2
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 1.2e-31 140.2 143 53.8
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.6e-31 139.8 128 58.6
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 1.6e-31 139.8 128 59.4
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.6e-31 139.8 128 60.2
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.6e-31 139.8 128 59.4
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 2.1e-31 139.4 130 56.9
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 3.6e-31 138.7 128 60.2
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 4.7e-31 138.3 129 57.4
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 4.7e-31 138.3 137 56.2
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 6.2e-31 137.9 135 55.6
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 1.1e-30 137.1 120 56.7
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 1.4e-30 136.7 127 58.3
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.8e-30 136.3 128 60.2
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.1e-30 135.6 123 60.2
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 4.0e-30 135.2 126 56.3
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 5.2e-30 134.8 128 57.8
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 5.2e-30 134.8 127 56.7
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 5.2e-30 134.8 111 65.8
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 6.8e-30 134.4 139 55.4
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 6.8e-30 134.4 126 57.1
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 8.9e-30 134.0 127 57.5
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 8.9e-30 134.0 127 55.9
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 8.9e-30 134.0 127 55.9
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.2e-29 133.7 136 53.7
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 1.2e-29 133.7 137 54.7
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.5e-29 133.3 127 52.8
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.5e-29 133.3 135 57.8
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 1.5e-29 133.3 127 55.9
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 2.0e-29 132.9 127 52.8
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 2.0e-29 132.9 128 55.5
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 2.0e-29 132.9 135 54.1
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 2.6e-29 132.5 127 56.7
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 3.4e-29 132.1 127 51.2
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 3.4e-29 132.1 140 53.6
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 4.4e-29 131.7 145 55.2
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 4.4e-29 131.7 127 57.5
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 5.8e-29 131.3 129 55.0
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 5.8e-29 131.3 124 57.3
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 5.8e-29 131.3 135 53.3
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 7.6e-29 131.0 128 57.8
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 7.6e-29 131.0 124 58.9
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 7.6e-29 131.0 134 53.7
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 9.9e-29 130.6 126 54.8
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.7e-28 129.8 135 51.9
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 2.2e-28 129.4 129 51.9
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 2.2e-28 129.4 124 56.5
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 2.2e-28 129.4 124 54.0
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.2e-28 129.4 127 55.9
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.8e-28 128.6 130 56.9
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 6.4e-28 127.9 127 53.5
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 6.4e-28 127.9 126 55.6
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 1.1e-27 127.1 120 53.3
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.1e-27 127.1 127 52.8
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-27 126.7 128 57.8
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.9e-27 126.3 143 53.8
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 1.9e-27 126.3 129 53.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.9e-27 126.3 125 52.8
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 3.2e-27 125.6 126 51.6
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 5.4e-27 124.8 127 52.0
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 2.7e-26 122.5 127 53.5
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.3e-25 120.2 127 51.2
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.7e-25 119.8 128 50.8
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.7e-25 119.8 166 43.4
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 6.6e-25 117.9 122 52.5
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 8.7e-25 117.5 125 51.2
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 8.7e-25 117.5 125 51.2
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 8.7e-25 117.5 125 51.2
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 8.7e-25 117.5 131 48.9
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 8.7e-25 117.5 131 48.9
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 2.5e-24 115.9 102 65.7
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 2.5e-24 115.9 102 65.7
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 7.3e-24 114.4 126 48.4
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 9.6e-24 114.0 112 52.7
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.6e-23 112.1 98 64.3
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 4.7e-23 111.7 159 42.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 8.1e-23 110.9 99 58.6
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 8.1e-23 110.9 128 48.4
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-21 106.7 96 65.6
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 2.6e-21 105.9 96 65.6
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.6e-21 105.9 94 60.6
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 1.7e-20 103.2 90 67.8
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 2.2e-20 102.8 96 64.6
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 3.8e-20 102.1 76 60.5
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.4e-19 100.1 79 64.6
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 1.6e-18 96.7 117 47.9
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.1e-18 96.3 117 47.0
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 6.0e-18 94.7 76 61.8
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 1.3e-17 93.6 77 57.1
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 1.1e-16 90.5 101 46.5
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 8.1e-15 84.3 128 40.6
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 3.1e-14 82.4 49 85.7
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 2.0e-13 79.7 121 41.3
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 3.4e-13 79.0 117 42.7
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 2.2e-12 76.3 112 47.3
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 2.4e-11 72.8 108 38.9
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 5.1e-09 65.1 92 47.8
BolC2t06414H Brassica oleracea HOM05D033078 ORTHO05D041034 7.4e-08 61.2 66 57.6
A06p31240 Brassica napus HOM05D033078 ORTHO05D041034 1.6e-07 60.1 66 56.1


User provided reference genes

Program Settings