Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p20230 Brassica napus HOM05D007554 ORTHO05D009569 5.9e-195 684.1 365 100.0
BraA03t11273Z Brassica rapa HOM05D007554 ORTHO05D009569 1.2e-168 596.7 365 90.7
BcaB01g03819 Brassica carinata HOM05D007554 ORTHO05D009569 1.6e-120 436.8 370 71.4
BolC3t14766H Brassica oleracea HOM05D007554 ORTHO05D009569 1.3e-109 400.6 333 73.0
BcaC01g05644 Brassica carinata HOM05D007554 ORTHO05D009569 5.1e-106 388.7 332 71.4
C03p23720 Brassica napus HOM05D007554 ORTHO05D009569 4.8e-104 382.1 333 70.9
AL4G32830 Arabidopsis lyrata HOM05D007554 ORTHO05D009569 7.7e-86 321.6 424 52.8
Thhalv10017640m.g Eutrema salsugineum HOM05D007554 ORTHO05D009569 3.8e-85 319.3 331 61.9
A05p09220 Brassica napus HOM05D007554 ORTHO05D009569 2.5e-84 316.6 433 52.4
BraA05t19878Z Brassica rapa HOM05D007554 ORTHO05D009569 2.3e-82 310.1 433 52.0
BcaB02g09343 Brassica carinata HOM05D007554 ORTHO05D009569 1.5e-81 307.4 447 50.6
CARHR130930 Cardamine hirsuta HOM05D007554 ORTHO05D009569 4.8e-80 302.4 425 52.0
BcaC02g11778 Brassica carinata HOM05D007554 ORTHO05D009569 1.8e-79 300.4 427 51.1
C04p11490 Brassica napus HOM05D007554 ORTHO05D009569 1.8e-79 300.4 427 51.1
BolC4t22799H Brassica oleracea HOM05D007554 ORTHO05D009569 1.8e-79 300.4 427 51.1
Sp4g18930 Schrenkiella parvula HOM05D007554 ORTHO05D009569 3.4e-78 296.2 391 52.2
Carub.0004s1847 Capsella rubella HOM05D007554 ORTHO05D009569 1.4e-76 290.8 422 49.3
AT2G36650 Arabidopsis thaliana HOM05D007554 ORTHO05D009569 3.9e-74 282.7 360 55.3
Aa31LG5G21850 Aethionema arabicum HOM05D007554 ORTHO05D009569 6.8e-58 228.8 415 43.9
THA.LOC104823478 Tarenaya hassleriana HOM05D007554 ORTHO05D009569 3.6e-51 206.5 425 39.8
Atru.chr8.1675 Acer truncatum HOM05D007554 ORTHO05D009569 6.0e-30 136.0 444 27.7
FAN09G2175 Fragaria x ananassa HOM05D000031 ORTHO05D001864 1.2e-27 128.3 326 29.8
FAN05G0950 Fragaria x ananassa HOM05D000031 ORTHO05D001864 1.6e-27 127.9 326 29.4
FAN05G4577 Fragaria x ananassa HOM05D007554 ORTHO05D009569 1.6e-27 127.9 326 29.4
FvH4_6g17340 Fragaria vesca HOM05D007554 ORTHO05D009569 2.8e-27 127.1 326 29.8
Ciclev10011754m.g Citrus clementina HOM05D007554 ORTHO05D009569 1.4e-26 124.8 453 27.6
FAN05G5377 Fragaria x ananassa HOM05D007554 ORTHO05D009569 3.1e-26 123.6 326 28.8
Gorai.006G159800 Gossypium raimondii HOM05D007554 ORTHO05D009569 6.8e-26 122.5 447 28.0
TAR623G1240 Trochodendron aralioides HOM05D007554 ORTHO05D009569 8.9e-26 122.1 370 27.6
Gohir.D09G139300 Gossypium hirsutum HOM05D007554 ORTHO05D009569 1.5e-25 121.3 447 28.4
VMungo0720G0941 Vigna mungo HOM05D007554 ORTHO05D009569 3.4e-25 120.2 390 29.7
Cpa.g.sc5.117 Carica papaya HOM05D007554 ORTHO05D009569 1.3e-24 118.2 339 28.9
QL07p041193 Quercus lobata HOM05D007554 ORTHO05D009569 1.3e-24 118.2 327 29.7
GSVIVG01033729001 Vitis vinifera HOM05D007554 ORTHO05D009569 3.7e-24 116.7 330 30.3
Manes.09G058083 Manihot esculenta HOM05D007554 ORTHO05D009569 3.2e-23 113.6 434 24.9
Thecc.05G076700 Theobroma cacao HOM05D007554 ORTHO05D009569 4.1e-23 113.2 344 28.8
CSS0026453 Camellia sinensis var. sinensis HOM05D007554 ORTHO05D009569 5.4e-23 112.8 339 29.5
Medtr1g061840 Medicago truncatula HOM05D007554 ORTHO05D009569 7.1e-23 112.5 386 26.4
Glyma.13G148500 Glycine max HOM05D007554 ORTHO05D009569 3.5e-22 110.2 429 27.0
Gohir.A09G143100 Gossypium hirsutum HOM05D007554 ORTHO05D009569 3.5e-22 110.2 343 28.9
PGR142G2625 Punica granatum HOM05D007554 ORTHO05D009569 4.6e-22 109.8 414 27.1
Prupe.7G122100 Prunus persica HOM05D007554 ORTHO05D009569 6.0e-22 109.4 336 26.8
CSS0026822 Camellia sinensis var. sinensis HOM05D007554 ORTHO05D009569 7.8e-22 109.0 339 28.9
Duzib106G2002 Durio zibethinus HOM05D007554 ORTHO05D009569 1.0e-21 108.6 335 27.8
Potri.005G098400 Populus trichocarpa HOM05D007554 ORTHO05D009569 5.1e-21 106.3 443 24.6
Lj2A125T59 Lonicera japonica HOM05D007554 ORTHO05D009569 1.5e-20 104.8 318 29.6
Eucgr.K02413 Eucalyptus grandis HOM05D007554 ORTHO05D009569 4.3e-20 103.2 368 30.2
Glyma.03G188800 Glycine max HOM05D007554 ORTHO05D009569 5.6e-20 102.8 327 29.4
HanXRQChr06g0181651 Helianthus annuus HOM05D007554 ORTHO05D009569 5.6e-20 102.8 358 27.4
Phvul.007G225500 Phaseolus vulgaris HOM05D007554 ORTHO05D009569 2.8e-19 100.5 337 28.8
Glyma.10G063900 Glycine max HOM05D007554 ORTHO05D009569 1.1e-18 98.6 443 26.4
Peaxi162Scf01063g00111 Petunia axillaris HOM05D007554 ORTHO05D009569 1.1e-18 98.6 338 26.3
CiPaw.09G006000 Carya illinoinensis HOM05D007554 ORTHO05D009569 2.3e-18 97.4 288 29.5
MD12G1101400 Malus domestica HOM05D007554 ORTHO05D009569 4.0e-18 96.7 387 25.8
TWI74G1006 Tripterygium wilfordii HOM05D007554 ORTHO05D009569 4.0e-18 96.7 442 23.8
Sed0015840 Sechium edule HOM05D000031 ORTHO05D001864 8.9e-18 95.5 236 31.4
Lsat_1_v5_gn_2_24301 Lactuca sativa HOM05D007554 ORTHO05D009569 1.2e-17 95.1 250 29.2
ECA238G1996 Erigeron canadensis HOM05D001775 ORTHO05D008700 3.4e-17 93.6 243 29.6
Cc06_g04860 Coffea canephora HOM05D007554 ORTHO05D009569 5.8e-17 92.8 344 25.0
RcHm_v2.0_Chr3g0471481 Rosa chinensis HOM05D007554 ORTHO05D009569 5.8e-17 92.8 317 27.4
TPR.G30363 Trifolium pratense HOM05D007554 ORTHO05D009569 9.9e-17 92.0 382 25.7
COL.COLO4_22265 Corchorus olitorius HOM05D007554 ORTHO05D008700 1.3e-16 91.7 360 23.6
Psat0s3550g0120 Pisum sativum HOM05D007554 ORTHO05D009569 1.7e-16 91.3 330 26.4
Sabra05G0080800 Salix brachista HOM05D007554 ORTHO05D009569 1.7e-16 91.3 339 26.3
vmacro08807 Vaccinium macrocarpon HOM05D007554 ORTHO05D009569 1.7e-16 91.3 324 29.0
FAN14G0141 Fragaria x ananassa HOM05D000031 ORTHO05D001864 2.9e-16 90.5 311 25.4
Lj1g0019279 Lotus japonicus HOM05D007554 ORTHO05D009569 2.9e-16 90.5 322 28.6
Phvul.001G184200 Phaseolus vulgaris HOM05D007554 ORTHO05D009569 8.4e-16 89.0 350 26.0
Ca_11566_v3 Cicer arietinum L. HOM05D007554 ORTHO05D008700 9.2e-15 85.5 310 25.5
MELO3C009416.2 Cucumis melo HOM05D007554 ORTHO05D009569 1.6e-14 84.7 239 29.7
Cfa016496 Carpinus fangiana HOM05D001775 ORTHO05D008700 2.1e-14 84.3 328 26.5
PGSC0003DMG401012981 Solanum tuberosum HOM05D007554 ORTHO05D009569 3.5e-14 83.6 240 27.1
Aqoxy2G01532 Aquilegia oxysepala HOM05D007554 ORTHO05D009569 4.6e-14 83.2 338 24.3
CsaV3_3G036620 Cucumis sativus L. HOM05D007554 ORTHO05D009569 4.6e-14 83.2 229 29.7
Solyc09g008660.3 Solanum lycopersicum HOM05D007554 ORTHO05D009569 6.0e-14 82.8 240 28.3
BcaC02g11783 Brassica carinata HOM05D007554 ORTHO05D009569 7.8e-14 82.4 142 42.3
arahy.Tifrunner.gnm1.ann1.WUL3RA Arachis hypogaea HOM05D007554 ORTHO05D009569 2.3e-13 80.9 339 26.3
AUR62040182 Chenopodium quinoa HOM05D007554 ORTHO05D009569 6.6e-13 79.3 326 23.6
ClCG10G019580 Citrullus lanatus HOM05D000031 ORTHO05D001864 6.6e-13 79.3 191 29.8
AUR62044070 Chenopodium quinoa HOM05D007554 ORTHO05D009569 1.1e-12 78.6 326 23.9
Lj5g0018631 Lotus japonicus HOM05D007554 ORTHO05D009569 1.1e-12 78.6 352 25.3
Lalb_Chr01g0018501 Lupinus albus HOM05D007554 ORTHO05D009569 2.5e-12 77.4 361 21.9
Dinv35842 Davidia involucrata HOM05D007554 ORTHO05D009569 4.3e-12 76.6 192 31.2
Glyma.19G189000 Glycine max HOM05D007554 ORTHO05D009569 5.6e-12 76.3 341 24.6
arahy.Tifrunner.gnm1.ann1.TQ9G2A Arachis hypogaea HOM05D007554 ORTHO05D009569 1.2e-11 75.1 339 26.3
Haze_19498 Corylus avellana HOM05D000031 ORTHO05D001864 1.2e-11 75.1 250 28.4
Nn2g13923 Nelumbo nucifera HOM05D007554 ORTHO05D009569 2.1e-11 74.3 220 30.9
CAN.G1830.10 Capsicum annuum HOM05D007554 ORTHO05D009569 2.8e-11 73.9 229 27.5
VMungo1383G1881 Vigna mungo HOM05D007554 ORTHO05D009569 4.7e-11 73.2 189 33.9
PSO339G0406 Papaver somniferum HOM05D007554 ORTHO05D009569 6.2e-11 72.8 160 29.4
PSO801G0154 Papaver somniferum HOM05D007554 ORTHO05D009569 6.2e-11 72.8 218 27.5
EL10Ac7g16728 Beta vulgaris HOM05D007554 ORTHO05D009569 1.8e-10 71.2 329 22.8
DCAR_015020 Daucus carota HOM05D007554 ORTHO05D009569 1.8e-10 71.2 328 22.9
Ah.15g091360 Amaranthus hybridus HOM05D007554 ORTHO05D009569 2.4e-10 70.9 309 25.2
Hma1.2p1_1578F.1_g291800 Hydrangea macrophylla HOM05D007554 ORTHO05D009569 3.1e-10 70.5 196 28.6
Sc07g0004650 Simmondsia chinensis HOM05D007554 ORTHO05D009569 2.6e-09 67.4 302 25.5
Sopen09g003460 Solanum pennellii HOM05D007554 ORTHO05D009569 2.6e-09 67.4 237 26.2
arahy.Tifrunner.gnm1.ann1.561HRF Arachis hypogaea HOM05D000566 ORTHO05D004798 4.4e-09 66.6 288 26.4
Rhsim08G0228800 Rhododendron simsii HOM05D000566 ORTHO05D004798 1.3e-08 65.1 262 26.3
Nitab4.5_0006709g0010 Nicotiana tabacum HOM05D007554 ORTHO05D009569 1.7e-08 64.7 333 21.6
Gorai.009G138100 Gossypium raimondii HOM05D000566 ORTHO05D004798 2.2e-08 64.3 303 25.7
AUR62022243 Chenopodium quinoa HOM05D000566 ORTHO05D004798 4.9e-08 63.2 248 27.4
arahy.Tifrunner.gnm1.ann1.YI8MDQ Arachis hypogaea HOM05D000566 ORTHO05D004798 2.4e-07 60.8 306 24.8
Actinidia21725 Actinidia chinensis HOM05D000566 ORTHO05D004798 3.2e-07 60.5 299 24.4
ATR0026G023 Amborella trichopoda HOM05D000566 ORTHO05D004798 3.2e-07 60.5 308 25.0
Prupe.3G056400 Prunus persica HOM05D000566 ORTHO05D004798 3.2e-07 60.5 296 23.6
Thecc.06G102300 Theobroma cacao HOM05D000566 ORTHO05D004798 3.2e-07 60.5 296 25.3
Gohir.D05G134500 Gossypium hirsutum HOM05D000566 ORTHO05D004798 4.2e-07 60.1 299 24.4
Nitab4.5_0004281g0070 Nicotiana tabacum HOM05D007554 ORTHO05D009569 4.2e-07 60.1 327 21.7
RcHm_v2.0_Chr2g0141111 Rosa chinensis HOM05D000566 ORTHO05D004798 4.2e-07 60.1 297 24.2
VMungo0331G1583 Vigna mungo HOM05D000566 ORTHO05D004798 5.4e-07 59.7 250 28.0
ECA232G4328 Erigeron canadensis HOM05D000566 ORTHO05D004798 1.2e-06 58.5 339 22.4
Gohir.A05G132600 Gossypium hirsutum HOM05D000566 ORTHO05D004798 1.2e-06 58.5 302 25.2
MBI04_g22191_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D009569 1.2e-06 58.5 246 27.2
AUR62031956 Chenopodium quinoa HOM05D000566 ORTHO05D004798 1.6e-06 58.2 255 26.3
Gorai.010G231300 Gossypium raimondii HOM05D000566 ORTHO05D004798 2.1e-06 57.8 255 25.1
AUR62036291 Chenopodium quinoa HOM05D000566 ORTHO05D000686 2.7e-06 57.4 306 24.2
Glyma.08G199600 Glycine max HOM05D000566 ORTHO05D004798 2.7e-06 57.4 245 26.9
Lalb_Chr04g0263011 Lupinus albus HOM05D000566 ORTHO05D004798 2.7e-06 57.4 251 24.7
CANSAT56G2153 Cannabis sativa HOM05D000566 ORTHO05D004798 4.6e-06 56.6 288 22.6
Gohir.D06G198400 Gossypium hirsutum HOM05D000566 ORTHO05D004798 4.6e-06 56.6 267 24.3
EL10Ac5g11774 Beta vulgaris HOM05D000566 ORTHO05D000686 6.0e-06 56.2 306 24.5
Ca_01174_v3 Cicer arietinum L. HOM05D000566 ORTHO05D004798 6.0e-06 56.2 236 27.5
DCAR_007592 Daucus carota HOM05D000566 ORTHO05D004798 6.0e-06 56.2 316 21.8
Duzib192G0109 Durio zibethinus HOM05D000566 ORTHO05D004798 6.0e-06 56.2 298 24.8
SMO361G0381 Selaginella moellendorffii HOM05D000566 ORTHO05D000686 6.0e-06 56.2 253 28.1
Sc12g0010040 Simmondsia chinensis HOM05D000566 ORTHO05D004798 6.0e-06 56.2 241 24.5
Glyma.13G353200 Glycine max HOM05D000566 ORTHO05D004798 7.8e-06 55.8 291 24.1
Oeu026720.1 Olea europaea HOM05D000566 ORTHO05D004798 7.8e-06 55.8 305 24.9


User provided reference genes

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