Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p19890 Brassica napus HOM05D006422 ORTHO05D007992 1.5e-37 159.1 86 100.0
BraA10t44366Z Brassica rapa HOM05D006422 ORTHO05D007992 1.7e-36 155.6 86 98.8
BraA05t20619Z Brassica rapa HOM05D006422 ORTHO05D007992 3.8e-36 154.5 86 97.7
A10p22970 Brassica napus HOM05D006422 ORTHO05D007992 1.3e-28 129.4 73 98.6
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 6.5e-28 127.1 74 95.9
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 6.5e-28 127.1 74 95.9
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 7.0e-22 107.1 77 81.8
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 9.1e-22 106.7 77 80.5
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 7.7e-21 103.6 75 82.7
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 7.7e-21 103.6 75 82.7
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 2.2e-20 102.1 75 82.7
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 6.5e-20 100.5 76 82.9
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 1.9e-19 99.0 77 76.6
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 2.5e-19 98.6 77 76.6
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 2.5e-19 98.6 77 76.6
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 2.5e-19 98.6 77 76.6
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 3.2e-19 98.2 78 76.9
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 4.2e-19 97.8 76 78.9
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 5.5e-19 97.4 77 74.0
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 2.7e-18 95.1 77 74.0
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 3.7e-15 84.7 74 73.0
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 3.7e-15 84.7 74 73.0
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 5.9e-13 77.4 77 64.9
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 2.5e-11 72.0 78 55.1
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 2.6e-08 62.0 67 52.2


User provided reference genes

Program Settings