Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 8.0e-227 790.0 384 100.0
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 5.4e-215 750.7 373 97.9
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.2e-110 404.1 400 55.2
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.9e-99 365.5 393 52.4
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 6.4e-99 365.2 397 53.1
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.9e-96 355.9 394 52.0
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.6e-96 355.1 400 51.8
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.3e-95 352.4 299 61.5
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 4.0e-93 345.9 397 50.9
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 8.9e-93 344.7 397 50.6
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-92 344.4 394 49.7
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 4.4e-92 342.4 376 51.9
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 4.9e-91 339.0 393 49.1
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 1.1e-90 337.8 394 49.7
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 7.0e-90 335.1 376 50.0
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 6.6e-88 328.6 374 50.5
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 8.6e-88 328.2 404 48.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 1.1e-87 327.8 371 51.2
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 9.8e-84 314.7 304 57.6
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.4e-82 310.1 296 57.8
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 4.3e-79 299.3 276 56.9
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 4.1e-74 282.7 313 52.7
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 1.1e-69 268.1 391 45.3
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 9.9e-68 261.5 258 54.7
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.1e-64 249.2 362 46.1
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 3.3e-63 246.5 362 41.7
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 3.3e-63 246.5 362 41.7
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-62 244.6 357 40.9
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 4.8e-62 242.7 357 40.3
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 6.2e-62 242.3 380 41.3
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-61 241.5 362 41.4
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.8e-61 240.7 407 41.3
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.3e-61 239.2 394 39.8
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.5e-60 237.7 213 58.2
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.0e-60 237.3 358 43.6
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.4e-60 236.5 373 41.0
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.8e-59 233.0 374 40.9
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.4e-58 231.1 359 41.5
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 2.1e-57 227.3 359 41.2
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 4.6e-57 226.1 359 39.0
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 7.9e-57 225.3 258 51.2
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.8e-56 224.2 362 42.8
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 3.0e-56 223.4 362 39.0
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 4.3e-55 219.5 335 39.4
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.1e-54 215.3 326 43.9
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 1.1e-53 214.9 391 38.6
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 9.0e-53 211.8 161 65.8
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-51 207.6 381 37.8
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 2.9e-51 206.8 332 39.5
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 8.4e-51 205.3 380 37.1
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 8.4e-51 205.3 380 37.1
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-50 204.9 380 38.2
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 5.5e-50 202.6 385 35.8
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 2.1e-49 200.7 379 37.7
BcaC01g05840 Brassica carinata HOM05D007494 ORTHO05D009621 3.5e-49 199.9 102 93.1
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 3.5e-49 199.9 384 36.2
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.8e-48 197.6 386 36.5
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 2.3e-48 197.2 352 37.5
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.5e-47 193.7 338 38.5
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.6e-46 191.0 355 36.9
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.8e-46 190.3 366 38.0
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 6.2e-46 189.1 287 43.9
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.8e-43 179.9 175 58.3
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 3.9e-40 169.9 379 33.2
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 6.3e-38 162.5 376 33.2
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 1.7e-35 154.5 358 31.8
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.7e-35 154.5 396 30.3
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.2e-33 148.3 317 35.6
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.7e-33 147.1 349 35.0
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 2.3e-32 144.1 242 40.9
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.9e-32 143.3 331 34.7
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 6.7e-32 142.5 219 40.2
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 2.5e-31 140.6 307 34.5
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.1e-29 135.2 229 41.9
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.1e-29 133.3 188 39.9
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.5e-28 131.3 369 30.1
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 5.9e-28 129.4 346 31.8
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.0e-27 128.6 322 35.7
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 3.8e-27 126.7 363 30.0
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 4.2e-26 123.2 183 42.6
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 3.6e-25 120.2 192 40.1
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 3.6e-25 120.2 192 40.1
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.9e-24 116.7 81 69.1
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.0e-23 114.4 307 31.9
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 5.2e-16 89.7 215 35.3
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 1.5e-15 88.2 352 25.9
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 1.6e-12 78.2 101 35.6
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.0e-11 75.5 239 30.1
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.3e-11 75.1 365 26.6
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 5.0e-11 73.2 364 26.4
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 6.5e-11 72.8 198 31.8
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 1.9e-10 71.2 110 42.7
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 1.9e-10 71.2 374 24.1
Peaxi162Scf00171g00817 Petunia axillaris HOM05D008697 ORTHO05D010866 2.5e-10 70.9 283 24.7
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 5.5e-10 69.7 168 32.7
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 7.2e-10 69.3 102 36.3
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 2.7e-09 67.4 230 28.7
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 4.7e-09 66.6 85 41.2
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.0e-08 65.5 349 23.8
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 2.3e-08 64.3 311 21.9
PGSC0003DMG400015217 Solanum tuberosum HOM05D008697 ORTHO05D010866 5.2e-08 63.2 220 27.3
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 6.7e-08 62.8 117 39.3
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 2.0e-07 61.2 227 29.1
DCAR_011704 Daucus carota HOM05D000007 ORTHO05D000017 7.5e-07 59.3 224 24.6
CAN.G1909.14 Capsicum annuum HOM05D008697 ORTHO05D010866 2.2e-06 57.8 231 27.3
QL02p015444 Quercus lobata HOM05D007494 ORTHO05D009621 2.2e-06 57.8 103 30.1
ECA246G4363 Erigeron canadensis HOM05D000007 ORTHO05D000017 3.7e-06 57.0 250 25.2
PGSC0003DMG400025634 Solanum tuberosum HOM05D008697 ORTHO05D010866 3.7e-06 57.0 213 24.9
Oeu008441.1 Olea europaea HOM05D008697 ORTHO05D010866 4.8e-06 56.6 203 27.1


User provided reference genes

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