Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 2.4e-156 555.4 281 100.0
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 2.7e-155 552.0 281 99.3
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 6.2e-152 540.8 281 96.8
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 6.2e-152 540.8 281 96.8
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 1.4e-151 539.7 281 96.4
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 8.1e-144 513.8 281 91.5
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 5.4e-132 474.6 282 84.8
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 6.2e-128 461.1 282 85.1
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 2.4e-127 459.1 281 82.2
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 6.4e-125 451.1 282 81.2
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 3.7e-104 382.1 264 75.0
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 2.6e-102 375.9 273 68.9
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 1.5e-89 333.6 219 80.4
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.1e-84 317.4 260 61.9
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 3.2e-84 315.8 236 64.0
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 6.1e-83 311.6 281 56.6
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 8.8e-82 307.8 259 59.5
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 3.3e-81 305.8 253 58.5
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 9.7e-81 304.3 260 58.1
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 9.7e-81 304.3 262 58.4
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 9.7e-81 304.3 274 55.5
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 2.2e-80 303.1 273 57.1
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 2.2e-80 303.1 273 57.1
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 2.8e-80 302.8 240 62.1
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 6.3e-80 301.6 273 55.3
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 3.1e-79 299.3 261 57.5
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 4.1e-79 298.9 252 58.7
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 5.3e-79 298.5 278 56.1
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 7.0e-79 298.1 225 62.7
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 7.0e-79 298.1 248 60.9
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 1.2e-78 297.4 264 56.1
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 3.5e-78 295.8 225 62.2
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 3.5e-78 295.8 253 56.9
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 5.9e-78 295.0 225 62.7
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 1.0e-77 294.3 252 57.1
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 1.3e-77 293.9 259 56.4
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 1.3e-77 293.9 252 57.9
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 2.9e-77 292.7 247 57.9
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 5.0e-77 292.0 253 57.7
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 5.0e-77 292.0 252 57.5
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 1.1e-76 290.8 249 59.0
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 1.1e-76 290.8 279 54.5
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.5e-76 289.7 266 54.9
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 2.5e-76 289.7 249 56.2
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 2.5e-76 289.7 249 56.2
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 5.5e-76 288.5 249 55.8
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 5.5e-76 288.5 280 53.2
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 1.2e-75 287.3 253 54.2
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 1.2e-75 287.3 252 57.5
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.2e-75 287.3 225 61.8
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 1.6e-75 287.0 225 60.4
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 2.7e-75 286.2 252 56.3
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 2.7e-75 286.2 255 56.9
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 4.7e-75 285.4 225 60.0
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 4.7e-75 285.4 225 60.9
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 4.7e-75 285.4 225 60.9
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 6.1e-75 285.0 241 59.8
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 1.4e-74 283.9 248 55.2
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 1.2e-73 280.8 240 56.7
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 3.4e-73 279.3 243 56.8
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 4.4e-73 278.9 248 54.8
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 5.7e-73 278.5 247 55.1
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 7.5e-73 278.1 251 56.6
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 2.2e-72 276.6 265 52.1
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 2.8e-72 276.2 224 61.2
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 3.7e-72 275.8 225 57.3
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 1.1e-71 274.2 250 54.4
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 1.4e-71 273.9 265 52.5
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 2.4e-71 273.1 250 54.0
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 4.1e-71 272.3 244 57.8
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 5.4e-71 271.9 253 53.0
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 2.0e-70 270.0 242 55.4
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 5.9e-70 268.5 244 57.4
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 6.5e-69 265.0 244 56.6
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 1.0e-66 257.7 228 53.1
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 1.8e-66 256.9 251 53.8
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 6.8e-66 255.0 224 58.9
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 8.9e-66 254.6 225 54.2
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 8.9e-66 254.6 222 59.9
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 2.6e-65 253.1 219 58.9
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 5.7e-65 251.9 134 92.5
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 8.3e-64 248.1 228 53.1
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 5.0e-61 238.8 221 53.4
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 1.2e-59 234.2 206 58.7
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 6.1e-59 231.9 175 60.0
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 1.8e-58 230.3 268 44.0
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 2.3e-58 229.9 212 55.7
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 3.0e-58 229.6 231 53.2
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 2.0e-57 226.9 231 49.8
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 2.6e-57 226.5 190 56.8
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 3.2e-55 219.5 221 45.7
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 1.9e-52 210.3 165 58.8
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 6.8e-50 201.8 178 57.3
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 2.9e-48 196.4 182 53.8
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 7.3e-44 181.8 257 40.9
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 8.3e-40 168.3 133 57.9
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 3.2e-39 166.4 181 44.8
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 2.7e-38 163.3 228 36.8
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.3e-37 160.2 142 56.3
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 3.9e-37 159.5 223 37.2
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 5.6e-36 155.6 196 48.5
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 6.2e-35 152.1 220 36.8
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 2.4e-26 123.6 137 50.4
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 9.0e-26 121.7 133 47.4
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 9.9e-25 118.2 195 34.4
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 6.4e-24 115.5 91 60.4
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 2.4e-23 113.6 231 32.0
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 8.1e-19 98.6 227 27.3
PRCOL_00003136 Prasinoderma coloniale HOM05D006617 ORTHO05D008247 6.9e-18 95.5 204 31.4
Glyma.05G087800 Glycine max HOM05D006617 ORTHO05D008247 9.9e-17 91.7 74 55.4
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 4.9e-16 89.4 98 51.0
Carub.0004s3068 Capsella rubella HOM05D006617 ORTHO05D008247 5.4e-15 85.9 48 89.6
Pp3c8_19270 Physcomitrium patens HOM05D006617 ORTHO05D008247 7.1e-15 85.5 224 26.8
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 1.5e-12 77.8 115 40.0
SMO307G0050 Selaginella moellendorffii HOM05D037974 ORTHO05D008247 2.2e-08 63.9 218 27.5
Gohir.A07G014600 Gossypium hirsutum HOM05D003252 ORTHO05D003640 6.4e-08 62.4 239 24.7
Aa31sc437G20 Aethionema arabicum HOM05D003252 ORTHO05D003640 8.4e-08 62.0 223 25.6
Aa31sc893G10 Aethionema arabicum HOM05D003252 ORTHO05D003640 8.4e-08 62.0 224 25.4
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 1.1e-07 61.6 61 57.4
Gorai.001G015100 Gossypium raimondii HOM05D003252 ORTHO05D003640 1.4e-07 61.2 229 24.0
Ciclev10012522m.g Citrus clementina HOM05D003252 ORTHO05D003640 7.1e-07 58.9 236 24.2
Gorai.009G034900 Gossypium raimondii HOM05D003252 ORTHO05D003640 1.6e-06 57.8 226 24.8
MD14G1098400 Malus domestica HOM05D006617 ORTHO05D008247 4.6e-06 56.2 69 43.5


User provided reference genes

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