Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p16870 Brassica napus HOM05D008803 ORTHO05D011315 4.0e-37 157.5 77 100.0
BraA03t10975Z Brassica rapa HOM05D008803 ORTHO05D011315 4.0e-37 157.5 77 100.0
BraA03t10972Z Brassica rapa HOM05D008803 ORTHO05D011315 4.9e-27 124.0 77 79.2
A03p16850 Brassica napus HOM05D008803 ORTHO05D011315 6.5e-27 123.6 77 79.2
BcaB01g04123 Brassica carinata HOM05D008803 ORTHO05D011315 1.3e-24 115.9 78 78.2
C03p19830 Brassica napus HOM05D008803 ORTHO05D011315 6.7e-24 113.6 77 74.0
BolC3t14360H Brassica oleracea HOM05D008803 ORTHO05D011315 6.7e-24 113.6 77 74.0
C03p19850 Brassica napus HOM05D008803 ORTHO05D011315 2.5e-23 111.7 66 86.4
BolC3t14363H Brassica oleracea HOM05D008803 ORTHO05D011315 2.5e-23 111.7 66 86.4
AT5G23212 Arabidopsis thaliana HOM05D008803 ORTHO05D011315 9.6e-23 109.8 77 71.4
AL6G34420 Arabidopsis lyrata HOM05D008803 ORTHO05D011315 4.1e-21 104.4 77 66.2
AL6G34440 Arabidopsis lyrata HOM05D008803 ORTHO05D011315 4.1e-21 104.4 77 66.2
BcaB06g26822 Brassica carinata HOM05D008803 ORTHO05D011315 3.4e-20 101.3 74 62.2
BcaB06g25857 Brassica carinata HOM05D008803 ORTHO05D011315 1.7e-19 99.0 74 63.5
CARHR190320 Cardamine hirsuta HOM05D008803 ORTHO05D011315 2.9e-19 98.2 77 61.0
BcaB06g25858 Brassica carinata HOM05D008803 ORTHO05D011315 3.8e-19 97.8 74 62.2
Thhalv10002959m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 6.5e-19 97.1 74 63.5
BcaC06g35895 Brassica carinata HOM05D008803 ORTHO05D011315 1.4e-18 95.9 75 61.3
A07p06550 Brassica napus HOM05D008803 ORTHO05D011315 1.4e-18 95.9 75 62.7
BolC7t41442H Brassica oleracea HOM05D008803 ORTHO05D011315 1.4e-18 95.9 75 61.3
Thhalv10003076m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 2.5e-18 95.1 74 58.1
BraA07t28450Z Brassica rapa HOM05D008803 ORTHO05D011315 4.2e-18 94.4 75 61.3
CARHR264730 Cardamine hirsuta HOM05D008803 ORTHO05D011315 5.5e-18 94.0 75 61.3
A07p06560 Brassica napus HOM05D008803 ORTHO05D011315 9.3e-18 93.2 75 60.0
A07p06570 Brassica napus HOM05D008803 ORTHO05D011315 9.3e-18 93.2 75 60.0
Thhalv10002768m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 9.3e-18 93.2 73 58.9
Thhalv10003010m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 3.6e-17 91.3 74 63.5
C07p09960 Brassica napus HOM05D008803 ORTHO05D011315 4.6e-17 90.9 75 60.0
C07p09970 Brassica napus HOM05D008803 ORTHO05D011315 4.6e-17 90.9 75 60.0
CARHR274220 Cardamine hirsuta HOM05D008803 ORTHO05D011315 5.7e-15 84.0 75 57.3
AL8G26140 Arabidopsis lyrata HOM05D008803 ORTHO05D011315 1.3e-14 82.8 75 54.7
AT5G51845 Arabidopsis thaliana HOM05D008803 ORTHO05D011315 3.1e-13 78.2 75 54.7
BcaC06g35893 Brassica carinata HOM05D008803 ORTHO05D011315 3.1e-13 78.2 66 56.1
Carub.0008s1188 Capsella rubella HOM05D008803 ORTHO05D011315 9.1e-13 76.6 77 55.8
Carub.0008s1187 Capsella rubella HOM05D008803 ORTHO05D011315 3.8e-11 71.2 75 52.0
A09p00540 Brassica napus HOM05D008803 ORTHO05D019738 1.0e-08 63.2 77 46.8
C09p00320 Brassica napus HOM05D008803 ORTHO05D019738 1.0e-08 63.2 77 46.8
BolC9t52967H Brassica oleracea HOM05D008803 ORTHO05D019738 1.0e-08 63.2 77 46.8
BraA09t35706Z Brassica rapa HOM05D008803 ORTHO05D019738 1.0e-08 63.2 77 46.8
AL6G53080 Arabidopsis lyrata HOM05D008803 ORTHO05D019738 5.7e-07 57.4 75 41.3
BcaB06g28097 Brassica carinata HOM05D008968 ORTHO05D012182 1.7e-06 55.8 77 40.3
BcaB04g16993 Brassica carinata HOM05D008968 ORTHO05D012182 8.2e-06 53.5 78 42.3


User provided reference genes

Program Settings