Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.8e-80 302.8 178 100.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.9e-77 292.7 178 85.4
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.9e-77 292.7 178 85.4
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.9e-77 292.7 178 85.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 6.0e-76 287.7 179 86.0
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 5.6e-74 281.2 179 90.5
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 3.3e-66 255.4 181 81.2
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 7.1e-61 237.7 189 78.3
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.3e-59 233.4 183 67.2
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 3.0e-59 232.3 189 65.6
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.6e-57 226.5 188 65.4
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 2.0e-55 219.5 180 74.4
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 2.7e-52 209.1 192 60.4
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 3.5e-44 182.2 192 65.1
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 6.7e-43 177.9 194 60.8
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 1.6e-41 173.3 193 62.2
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.4e-40 170.2 195 49.7
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 9.0e-40 167.5 184 62.5
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 3.4e-39 165.6 199 47.7
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.0e-38 164.1 191 55.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 2.2e-38 162.9 184 61.4
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.9e-38 162.5 184 61.4
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.1e-37 160.6 191 49.2
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 2.5e-37 159.5 204 58.8
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 2.5e-37 159.5 191 50.8
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.2e-37 159.1 198 49.5
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 5.5e-37 158.3 204 56.9
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 5.5e-37 158.3 192 49.0
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.3e-37 157.5 174 58.0
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.2e-36 157.1 196 58.7
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-36 157.1 173 53.2
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-36 157.1 173 53.2
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.1e-36 156.4 198 49.0
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 2.7e-36 156.0 193 50.3
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 3.5e-36 155.6 187 48.7
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.0e-35 154.1 101 72.3
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.3e-35 153.7 101 73.3
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.8e-35 153.3 172 52.3
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 2.3e-35 152.9 167 50.9
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.0e-35 152.5 173 57.2
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.9e-35 152.1 203 54.2
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 3.9e-35 152.1 172 52.3
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 3.9e-35 152.1 101 72.3
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.7e-35 151.4 167 56.9
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 8.7e-35 151.0 170 52.9
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 5.7e-34 148.3 101 71.3
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 7.4e-34 147.9 204 46.6
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.6e-33 146.7 104 71.2
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 2.8e-33 146.0 97 69.1
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 6.3e-33 144.8 190 54.2
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 8.2e-33 144.4 104 67.3
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.1e-32 144.1 104 67.3
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 6.9e-32 141.4 104 65.4
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 9.0e-32 141.0 104 64.4
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 2.0e-31 139.8 105 68.6
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.6e-31 139.4 199 49.2
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 4.5e-31 138.7 101 65.3
Thhalv10015015m.g Eutrema salsugineum HOM05D007220 ORTHO05D009058 7.6e-31 137.9 117 76.9
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.2e-30 136.3 104 62.5
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 2.9e-30 136.0 103 65.0
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 5.0e-30 135.2 187 53.5
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 6.5e-30 134.8 104 61.5
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.4e-29 133.7 104 65.4
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.4e-29 133.7 101 64.4
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 2.5e-29 132.9 105 61.0
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 2.5e-29 132.9 190 51.6
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.2e-29 132.5 105 61.9
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 3.2e-29 132.5 104 63.5
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 9.3e-29 131.0 102 61.8
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 9.3e-29 131.0 102 61.8
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.2e-28 130.6 103 66.0
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.2e-28 130.6 98 63.3
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.6e-28 128.6 101 62.4
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.0e-27 127.5 106 60.4
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 2.3e-27 126.3 100 62.0
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.3e-27 126.3 104 60.6
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 3.9e-27 125.6 107 60.7
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 8.8e-27 124.4 194 40.2
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.5e-26 123.6 104 60.6
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 4.3e-26 122.1 96 60.4
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 5.7e-26 121.7 103 62.1
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 7.4e-26 121.3 180 41.7
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.5e-23 113.6 102 52.9
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.6e-23 112.8 97 56.7
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.4e-23 112.5 113 55.8
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 5.9e-23 111.7 102 52.0
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 5.0e-22 108.6 78 64.1
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 5.0e-22 108.6 101 54.5
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.4e-21 107.1 101 52.5
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 4.2e-21 105.5 91 57.1
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 3.0e-19 99.4 138 46.4
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 3.9e-19 99.0 64 75.0
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 5.1e-19 98.6 71 64.8
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 6.7e-19 98.2 169 36.7
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 3.2e-13 79.3 53 67.9
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 2.1e-12 76.6 193 29.0
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 4.7e-12 75.5 94 41.5
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 6.1e-12 75.1 94 42.6
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.8e-11 73.6 70 47.1
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 3.9e-11 72.4 55 61.8
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.7e-10 68.6 44 70.5
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 8.2e-09 64.7 53 58.5
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 8.2e-09 64.7 156 34.6
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.1e-08 64.3 154 33.8
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.1e-08 64.3 154 33.8
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 4.5e-07 58.9 74 41.9
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.0e-06 57.8 55 54.5
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.9e-06 56.2 58 51.7


User provided reference genes

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