Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 4.9e-32 140.6 74 100.0
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 4.9e-32 140.6 74 100.0
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 4.2e-31 137.5 74 97.3
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 2.7e-30 134.8 72 97.2
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 1.3e-29 132.5 74 94.6
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 1.3e-29 132.5 74 94.6
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 8.7e-29 129.8 74 91.9
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 1.1e-28 129.4 74 91.9
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 1.5e-28 129.0 71 94.4
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.9e-28 128.6 71 94.4
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 4.3e-28 127.5 71 93.0
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 4.3e-28 127.5 71 93.0
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 5.6e-28 127.1 74 89.2
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 5.6e-28 127.1 74 89.2
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 5.6e-28 127.1 74 89.2
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 7.3e-28 126.7 74 90.5
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 1.3e-27 125.9 71 91.5
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 2.8e-27 124.8 71 90.1
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 3.1e-26 121.3 71 87.3
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 2.4e-23 111.7 71 83.1
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 3.5e-22 107.8 69 78.3
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 6.0e-22 107.1 71 78.9
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 3.9e-21 104.4 69 76.8
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 6.6e-21 103.6 71 74.6
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 8.7e-21 103.2 71 74.6
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.1e-20 102.8 71 74.6
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 1.5e-20 102.4 69 73.9
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.5e-20 102.4 69 73.9
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.5e-20 102.4 69 73.9
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 1.5e-20 102.4 66 77.3
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 3.3e-20 101.3 71 73.2
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.3e-20 101.3 71 73.2
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 3.3e-20 101.3 71 73.2
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 3.3e-20 101.3 71 71.8
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 7.3e-20 100.1 71 73.2
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 1.6e-19 99.0 71 67.6
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 1.6e-19 99.0 71 71.8
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 2.1e-19 98.6 69 71.0
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 2.8e-19 98.2 63 77.8
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 4.8e-19 97.4 66 74.2
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 4.8e-19 97.4 75 70.7
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 6.2e-19 97.1 74 67.6
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 6.2e-19 97.1 71 69.0
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 6.2e-19 97.1 66 72.7
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 8.1e-19 96.7 66 72.7
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 1.1e-18 96.3 71 69.0
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.1e-18 96.3 73 68.5
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 1.8e-18 95.5 64 73.4
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 4.0e-18 94.4 71 66.2
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 6.9e-18 93.6 71 67.6
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 9.0e-18 93.2 86 60.5
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 1.5e-17 92.4 71 66.2
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.5e-17 92.4 70 67.1
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.5e-17 92.4 71 69.0
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 2.6e-17 91.7 71 66.2
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 2.6e-17 91.7 66 66.7
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 4.5e-17 90.9 61 77.0
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 5.8e-17 90.5 63 71.4
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 7.6e-17 90.1 71 64.8
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 1.3e-16 89.4 66 66.7
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 1.7e-16 89.0 71 64.8
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 1.7e-16 89.0 71 62.0
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 1.7e-16 89.0 63 68.3
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 2.2e-16 88.6 63 69.8
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.2e-16 88.6 64 68.8
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 2.9e-16 88.2 71 64.8
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 2.9e-16 88.2 97 53.6
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 3.8e-16 87.8 71 62.0
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 3.8e-16 87.8 64 68.8
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 8.4e-16 86.7 71 60.6
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 8.4e-16 86.7 64 65.6
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 1.1e-15 86.3 66 63.6
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 1.1e-15 86.3 71 62.0
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 1.9e-15 85.5 69 65.2
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 3.2e-15 84.7 71 60.6
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 3.2e-15 84.7 69 62.3
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 4.2e-15 84.3 71 60.6
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.6e-14 82.4 96 53.1
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 2.1e-14 82.0 71 62.0
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 2.7e-14 81.6 71 60.6
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 3.5e-14 81.3 71 60.6
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 3.5e-14 81.3 71 56.3
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 4.6e-14 80.9 61 67.2
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 4.6e-14 80.9 64 67.2
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 7.9e-14 80.1 66 62.1
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 7.9e-14 80.1 64 64.1
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 7.9e-14 80.1 71 59.2
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 1.0e-13 79.7 66 59.1
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 1.0e-13 79.7 66 62.1
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 1.3e-13 79.3 67 59.7
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 1.8e-13 79.0 70 58.6
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 6.7e-13 77.0 63 66.7
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.7e-13 76.6 71 60.6
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 8.7e-13 76.6 70 60.0
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 1.1e-12 76.3 64 60.9
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 1.5e-12 75.9 71 57.7
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 3.3e-12 74.7 64 60.9
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 4.3e-12 74.3 74 51.4
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 4.3e-12 74.3 130 39.2
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 4.3e-12 74.3 69 56.5
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 9.6e-12 73.2 71 59.2
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 2.8e-11 71.6 71 53.5
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 3.7e-11 71.2 71 53.5
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 3.7e-11 71.2 71 53.5
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.8e-10 68.9 56 66.1
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 3.1e-10 68.2 63 58.7
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 3.1e-10 68.2 54 66.7
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 3.1e-10 68.2 71 52.1
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 4.0e-10 67.8 43 74.4
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.3e-10 67.4 70 54.3
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 6.9e-10 67.0 61 59.0
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 9.0e-10 66.6 105 43.8
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 1.5e-09 65.9 56 57.1
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 2.0e-09 65.5 45 73.3
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 2.0e-09 65.5 74 50.0
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 2.0e-09 65.5 41 75.6
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 4.5e-09 64.3 41 73.2
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 8.4e-08 60.1 43 72.1
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 1.1e-07 59.7 41 65.9
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.1e-07 59.7 45 71.1
Zm00001eb294050 Zea mays HOM05D006482 ORTHO05D008149 1.9e-07 58.9 74 45.9
FvH4_4g29090 Fragaria vesca HOM05D000768 ORTHO05D046510 9.3e-07 56.6 48 64.6
Zm00001eb160720 Zea mays HOM05D006482 ORTHO05D008149 2.7e-06 55.1 68 47.1
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 3.5e-06 54.7 41 68.3
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 3.5e-06 54.7 43 62.8


User provided reference genes

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