Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p14530 Brassica napus HOM05D000480 ORTHO05D000313 2.0e-127 459.1 237 100.0
C03p16980 Brassica napus HOM05D000480 ORTHO05D000313 2.1e-92 342.8 236 78.4
BcaC01g06315 Brassica carinata HOM05D000480 ORTHO05D000313 2.0e-90 336.3 236 77.1
BcaB01g04305 Brassica carinata HOM05D000480 ORTHO05D000313 1.1e-88 330.5 236 75.8
BolC3t14110H Brassica oleracea HOM05D000480 ORTHO05D000313 2.4e-88 329.3 247 73.7
Sp6g16580 Schrenkiella parvula HOM05D000480 ORTHO05D000313 3.2e-85 318.9 237 73.4
Thhalv10013813m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 3.2e-77 292.4 245 67.3
Thhalv10013583m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 6.1e-76 288.1 241 66.4
BcaB01g04304 Brassica carinata HOM05D000480 ORTHO05D000313 7.2e-69 264.6 239 64.0
CARHR267930 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.1e-68 263.1 242 61.6
AT5G54620 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 1.2e-66 257.3 237 61.6
A10p11890 Brassica napus HOM05D000480 ORTHO05D000313 7.5e-66 254.6 244 57.8
BraA10t43286Z Brassica rapa HOM05D000480 ORTHO05D000313 7.5e-66 254.6 244 57.8
C09p44960 Brassica napus HOM05D000480 ORTHO05D000313 4.8e-65 251.9 244 57.4
BcaC04g20322 Brassica carinata HOM05D000480 ORTHO05D000313 6.3e-65 251.5 244 57.4
BolC9t57374H Brassica oleracea HOM05D000480 ORTHO05D000313 6.3e-65 251.5 244 57.4
CARHR267920 Cardamine hirsuta HOM05D000480 ORTHO05D000313 3.1e-64 249.2 241 59.8
BraA06t26905Z Brassica rapa HOM05D000480 ORTHO05D000313 8.5e-62 241.1 231 59.7
AL8G30070 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 7.2e-61 238.0 230 57.4
BcaB08g35822 Brassica carinata HOM05D000480 ORTHO05D000313 3.3e-53 212.6 188 59.6
AT5G54610 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 5.5e-53 211.8 236 53.4
CARHR267900 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.3e-51 206.5 210 58.1
Carub.0008s1488 Capsella rubella HOM05D000480 ORTHO05D000313 9.5e-45 184.5 226 49.6
Carub.0006s3173 Capsella rubella HOM05D000480 ORTHO05D000313 2.1e-44 183.3 241 46.1
THA.LOC104815248 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 3.9e-38 162.5 235 41.3
SpUn1067_0010 Schrenkiella parvula HOM05D000480 ORTHO05D000313 3.1e-35 152.9 99 76.8
Carub.0006s2949 Capsella rubella HOM05D000480 ORTHO05D000313 2.2e-33 146.7 236 43.6
THA.LOC104813058 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 2.2e-33 146.7 235 41.3
AL6G44770 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 2.9e-33 146.4 238 42.4
CARHR255880 Cardamine hirsuta HOM05D000480 ORTHO05D000313 6.4e-33 145.2 247 40.1
BcaB01g01508 Brassica carinata HOM05D000480 ORTHO05D000313 9.2e-32 141.4 236 41.1
C09p34350 Brassica napus HOM05D000480 ORTHO05D000313 9.2e-32 141.4 238 41.2
BolC9t56278H Brassica oleracea HOM05D000480 ORTHO05D000313 9.2e-32 141.4 238 41.2
BcaC04g21204 Brassica carinata HOM05D000480 ORTHO05D000313 1.2e-31 141.0 235 40.9
AT4G10720 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 2.6e-26 123.2 236 37.7
Carub.0006s3131 Capsella rubella HOM05D000480 ORTHO05D000313 4.1e-24 115.9 245 35.9
BcaB05g22692 Brassica carinata HOM05D000480 ORTHO05D000313 6.0e-23 112.1 236 34.3
BcaC04g21065 Brassica carinata HOM05D000480 ORTHO05D000313 6.0e-23 112.1 235 35.7
BcaC04g21067 Brassica carinata HOM05D000480 ORTHO05D000313 6.0e-23 112.1 235 35.7
C09p36070 Brassica napus HOM05D000480 ORTHO05D000313 6.0e-23 112.1 235 35.7
BolC9t56446H Brassica oleracea HOM05D000480 ORTHO05D000313 6.0e-23 112.1 235 35.7
Aa31LG9G11340 Aethionema arabicum HOM05D000480 ORTHO05D000313 7.8e-23 111.7 243 32.9
A09p28510 Brassica napus HOM05D000480 ORTHO05D000313 3.9e-22 109.4 236 34.7
Sp6g28600 Schrenkiella parvula HOM05D000480 ORTHO05D000313 5.6e-21 105.5 235 32.8
Aa31LG9G11380 Aethionema arabicum HOM05D000480 ORTHO05D000313 7.3e-21 105.1 243 32.5
Thhalv10013476m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.8e-19 100.5 236 34.7
AL6G26350 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 4.0e-19 99.4 237 31.2
BolC5t29983H Brassica oleracea HOM05D000480 ORTHO05D000313 3.4e-18 96.3 244 34.4
AT5G15500 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 5.8e-18 95.5 235 30.6
CARHR197810 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.2e-17 93.6 235 31.5
C08p45690 Brassica napus HOM05D000480 ORTHO05D000313 3.8e-17 92.8 211 34.1
BcaC05g25356 Brassica carinata HOM05D000480 ORTHO05D000313 6.4e-17 92.0 240 33.3
BcaB01g05047 Brassica carinata HOM05D000480 ORTHO05D000313 4.2e-16 89.4 179 35.2
BraA09t41575Z Brassica rapa HOM05D000480 ORTHO05D000313 4.2e-16 89.4 215 33.5
A09p62090 Brassica napus HOM05D000480 ORTHO05D000313 5.4e-16 89.0 207 34.3
BolC3t13315H Brassica oleracea HOM05D000480 ORTHO05D000313 1.2e-15 87.8 244 34.4
Sp1g12850 Schrenkiella parvula HOM05D000480 ORTHO05D000313 2.1e-15 87.0 215 32.6
AT1G14480 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 2.7e-15 86.7 232 32.3
C03p08180 Brassica napus HOM05D000480 ORTHO05D000313 2.7e-15 86.7 241 33.2
Carub.0001s1422 Capsella rubella HOM05D000480 ORTHO05D000313 2.7e-15 86.7 209 33.0
Aa31LG1G570 Aethionema arabicum HOM05D000480 ORTHO05D000313 6.0e-15 85.5 252 29.0
C05p12350 Brassica napus HOM05D000480 ORTHO05D000313 6.0e-15 85.5 233 32.2
BolC8t52123H Brassica oleracea HOM05D000480 ORTHO05D000313 7.8e-15 85.1 211 32.7
BcaC05g24424 Brassica carinata HOM05D000480 ORTHO05D000313 1.0e-14 84.7 232 30.2
BcaC05g24430 Brassica carinata HOM05D000480 ORTHO05D000313 1.0e-14 84.7 232 30.2
A06p10520 Brassica napus HOM05D000480 ORTHO05D000313 1.0e-14 84.7 248 32.3
BolC5t29113H Brassica oleracea HOM05D000480 ORTHO05D000313 1.0e-14 84.7 232 30.2
Thhalv10009831m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.3e-14 84.3 216 33.8
BraA09t41574Z Brassica rapa HOM05D000480 ORTHO05D000313 1.7e-14 84.0 211 32.2
AT1G14500 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 3.9e-14 82.8 208 31.7
BcaB08g34401 Brassica carinata HOM05D000480 ORTHO05D000313 5.1e-14 82.4 220 31.8
BraA06t24233Z Brassica rapa HOM05D000480 ORTHO05D000313 5.1e-14 82.4 227 31.7
BolC5t29986H Brassica oleracea HOM05D000480 ORTHO05D000313 6.6e-14 82.0 228 32.0
BcaC05g25355 Brassica carinata HOM05D000480 ORTHO05D000313 1.9e-13 80.5 162 37.0
C05p12390 Brassica napus HOM05D000480 ORTHO05D000313 1.9e-13 80.5 162 37.0
BcaC07g41568 Brassica carinata HOM05D000480 ORTHO05D000313 5.6e-13 79.0 196 32.7
BcaB02g06501 Brassica carinata HOM05D000480 ORTHO05D000313 7.3e-13 78.6 203 33.0
BolC5t29984H Brassica oleracea HOM05D000480 ORTHO05D000313 1.3e-12 77.8 229 31.9
C09p44310 Brassica napus HOM05D000480 ORTHO05D000313 2.8e-12 76.6 210 34.3
A06p10530 Brassica napus HOM05D000480 ORTHO05D000313 4.8e-12 75.9 156 34.6
Aa31LG1G560 Aethionema arabicum HOM05D000480 ORTHO05D000313 2.4e-11 73.6 100 42.0
Thhalv10029378m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 4.0e-11 72.8 170 36.5
BcaC05g25352 Brassica carinata HOM05D000480 ORTHO05D000313 3.8e-09 66.2 125 36.0
CARHR014950 Cardamine hirsuta HOM05D000480 ORTHO05D000313 4.9e-09 65.9 98 39.8
Duzib151G0332 Durio zibethinus HOM05D000480 ORTHO05D000313 6.4e-09 65.5 108 35.2
Thecc.10G052600 Theobroma cacao HOM05D000480 ORTHO05D000313 6.4e-09 65.5 223 30.0
Thecc.10G053900 Theobroma cacao HOM05D000480 ORTHO05D034848 1.1e-08 64.7 160 29.4
BcaB02g06502 Brassica carinata HOM05D000480 ORTHO05D000313 1.4e-08 64.3 196 31.1
Lj1g0008219 Lotus japonicus HOM05D000480 ORTHO05D000313 2.4e-08 63.5 226 27.9
Gohir.D10G222166 Gossypium hirsutum HOM05D000480 ORTHO05D000313 7.1e-08 62.0 184 32.1
Gorai.011G252200 Gossypium raimondii HOM05D000480 ORTHO05D000313 7.1e-08 62.0 184 32.1
Duzib114G0019 Durio zibethinus HOM05D000480 ORTHO05D000313 1.2e-07 61.2 204 29.9
BcaB08g34400 Brassica carinata HOM05D000480 ORTHO05D000313 3.5e-07 59.7 214 30.4
BcaB01g04303 Brassica carinata HOM05D000480 ORTHO05D000313 4.6e-07 59.3 68 55.9
Thecc.10G053100 Theobroma cacao HOM05D000480 ORTHO05D000313 7.9e-07 58.5 228 29.8
BcaB02g06499 Brassica carinata HOM05D000480 ORTHO05D000313 1.0e-06 58.2 161 31.7
Thecc.10G054100 Theobroma cacao HOM05D000480 ORTHO05D000313 1.0e-06 58.2 229 29.7
Thecc.10G054300 Theobroma cacao HOM05D000480 ORTHO05D000313 1.0e-06 58.2 100 33.0
BcaB01g01064 Brassica carinata HOM05D000480 ORTHO05D000313 1.7e-06 57.4 102 35.3
BolC9t56448H Brassica oleracea HOM05D000480 ORTHO05D000313 1.7e-06 57.4 101 37.6
VMungo1309G0918 Vigna mungo HOM05D000480 ORTHO05D000313 1.7e-06 57.4 224 26.8
Phvul.009G085000 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 3.0e-06 56.6 181 29.3
arahy.Tifrunner.gnm1.ann1.JBU02Z Arachis hypogaea HOM05D000480 ORTHO05D000313 3.9e-06 56.2 186 28.0
Carub.0006s1366 Capsella rubella HOM05D000480 ORTHO05D000313 6.6e-06 55.5 209 25.4
Glyma.04G058500 Glycine max HOM05D000480 ORTHO05D000313 6.6e-06 55.5 219 27.4
Gohir.D10G222177 Gossypium hirsutum HOM05D000480 ORTHO05D000313 6.6e-06 55.5 185 30.3
Gorai.011G252300 Gossypium raimondii HOM05D000480 ORTHO05D000313 6.6e-06 55.5 185 30.3
Thecc.10G053800 Theobroma cacao HOM05D000480 ORTHO05D000313 8.7e-06 55.1 230 30.9


User provided reference genes

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