Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 8.1e-253 876.7 480 100.0
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.2e-224 783.1 480 91.0
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.1e-222 776.5 480 90.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 9.1e-220 766.9 502 86.9
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.9e-218 761.9 480 89.2
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.7e-189 665.2 507 76.9
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 5.1e-162 575.1 491 71.5
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 8.9e-159 564.3 554 63.5
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.9e-156 556.6 537 64.8
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.2e-147 527.3 457 68.7
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 1.8e-90 337.4 394 59.4
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 3.4e-33 147.1 512 30.1
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 7.6e-33 146.0 590 30.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.7e-29 134.8 131 52.7
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.9e-28 131.3 546 29.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.8e-27 127.5 541 28.1
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.4e-26 125.2 422 31.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 6.9e-26 122.9 603 27.7
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 9.0e-26 122.5 496 29.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.0e-25 121.3 559 27.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 4.4e-25 120.2 129 48.8
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 7.6e-25 119.4 538 29.7
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 9.9e-25 119.0 590 27.1
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.7e-24 118.2 574 28.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.2e-24 117.9 574 27.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.4e-24 115.9 603 27.2
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.4e-24 115.9 595 27.9
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 8.4e-24 115.9 489 28.2
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.9e-23 114.8 353 31.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.9e-23 114.8 174 39.7
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.9e-23 114.8 201 40.8
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.2e-23 114.0 432 30.6
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.2e-23 114.0 124 50.8
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 9.3e-23 112.5 522 29.5
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 9.3e-23 112.5 611 27.3
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 9.3e-23 112.5 125 45.6
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 9.3e-23 112.5 623 26.0
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.7e-22 110.9 558 26.3
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 3.5e-22 110.5 270 37.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 6.0e-22 109.8 487 27.1
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 6.0e-22 109.8 495 26.7
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.0e-22 109.8 316 30.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 7.9e-22 109.4 534 27.7
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.0e-21 109.0 316 30.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 2.3e-21 107.8 296 33.8
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.3e-21 107.8 298 29.9
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.3e-21 107.8 509 27.1
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 3.0e-21 107.5 164 39.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 6.6e-21 106.3 307 32.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.6e-21 106.3 323 30.3
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 8.7e-21 105.9 554 26.9
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.1e-20 105.5 616 26.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.5e-20 105.1 155 38.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.3e-20 103.6 130 43.8
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 5.6e-20 103.2 552 27.7
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.6e-20 103.2 562 27.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 7.4e-20 102.8 221 33.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 7.4e-20 102.8 139 38.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 7.4e-20 102.8 431 28.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 9.6e-20 102.4 361 32.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-19 102.1 572 27.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.8e-19 100.9 240 31.7
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 3.6e-19 100.5 303 31.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.6e-19 100.5 127 44.1
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 4.8e-19 100.1 537 26.8
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 4.8e-19 100.1 142 41.5
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.2e-19 99.8 564 28.4
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 6.2e-19 99.8 601 25.0
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 8.1e-19 99.4 340 31.5
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.4e-18 98.6 127 43.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.4e-18 98.6 462 25.8
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.8e-18 98.2 582 25.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.8e-18 98.2 235 32.8
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.5e-17 95.1 469 27.1
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.0e-17 94.7 578 27.0
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.6e-17 92.8 585 25.8
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 7.6e-17 92.8 512 26.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 3.8e-16 90.5 634 24.3
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 4.9e-16 90.1 507 25.0
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 6.4e-16 89.7 235 33.2
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.9e-15 88.2 205 32.7
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 4.2e-15 87.0 216 29.2
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 7.1e-15 86.3 486 26.7
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 2.1e-14 84.7 637 24.6
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 4.6e-14 83.6 76 50.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 7.9e-14 82.8 323 30.0
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.0e-13 80.9 540 26.5
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.1e-12 79.0 125 36.0
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 9.6e-12 75.9 444 24.8
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.8e-11 73.6 396 26.8
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-10 71.6 140 34.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.8e-10 71.6 301 27.2
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.1e-10 70.9 505 24.4
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.1e-10 70.9 495 24.6
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 7.6e-09 66.2 181 29.8
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 1.0e-08 65.9 348 29.0
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 4.9e-08 63.5 408 25.5
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 5.5e-07 60.1 52 51.9
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.5e-07 60.1 207 28.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.5e-07 60.1 207 28.5
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.5e-06 57.4 438 26.3
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 7.9e-06 56.2 126 29.4


User provided reference genes

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