Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-122 443.0 215 100.0
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.6e-112 409.5 216 94.4
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-110 402.5 216 92.6
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-110 402.5 216 92.6
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-110 402.1 197 99.5
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 7.7e-94 347.4 210 83.3
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 7.7e-94 347.4 210 83.3
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-93 346.3 210 82.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 7.2e-92 340.9 211 81.0
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 6.1e-91 337.8 211 79.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 9.7e-89 330.5 207 79.7
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 4.5e-86 321.6 210 79.5
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 4.1e-79 298.5 184 80.4
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 7.7e-78 294.3 209 73.7
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 4.4e-73 278.5 169 79.9
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 3.5e-62 242.3 150 80.7
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.2e-47 192.6 169 59.2
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-46 190.7 208 52.9
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-46 189.5 194 54.1
BcaC01g06451 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-45 186.8 176 58.0
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-44 184.1 212 50.0
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-44 184.1 212 50.0
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-42 177.6 193 53.9
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-42 176.8 212 50.0
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.4e-41 172.6 196 52.6
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-40 170.2 209 51.2
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 5.1e-37 158.7 183 49.7
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 7.3e-36 154.8 187 49.2
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-33 146.4 160 51.9
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 4.4e-33 145.6 128 60.9
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 2.2e-32 143.3 154 50.6
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-30 136.7 163 47.9
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 7.6e-25 118.2 123 50.4
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.6e-22 110.5 150 45.3
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-22 109.4 153 41.8
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 7.8e-22 108.2 139 43.9
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.3e-21 107.5 141 41.8
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.3e-21 107.5 146 39.7
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 2.3e-21 106.7 153 37.9
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-21 105.9 134 41.0
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.6e-21 105.1 140 39.3
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.7e-21 104.8 153 39.2
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-20 104.4 140 38.6
AL52U10010 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.5e-20 103.2 117 50.4
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.5e-20 103.2 152 42.1
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 7.3e-20 101.7 149 38.9
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 7.3e-20 101.7 153 38.6
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-19 100.5 151 37.7
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 1.6e-19 100.5 151 37.7
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-19 100.1 155 36.8
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-19 100.1 138 40.6
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.1e-19 100.1 138 40.6
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 2.1e-19 100.1 155 36.8
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-19 99.8 143 39.2
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 4.8e-19 99.0 138 39.9
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-18 97.8 137 37.2
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-18 97.8 138 39.1
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.8e-18 97.1 139 38.1
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-18 96.7 137 37.2
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 2.4e-18 96.7 145 35.9
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-18 96.3 142 36.6
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-18 96.3 146 37.0
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.0e-18 95.9 136 41.9
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 4.0e-18 95.9 116 44.0
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 9.0e-18 94.7 159 35.2
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-17 94.4 132 38.6
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-17 93.6 157 37.6
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.6e-17 93.2 137 37.2
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.4e-17 92.8 155 36.8
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.4e-17 92.8 171 36.8
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 4.5e-17 92.4 159 34.6
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.5e-17 92.4 160 34.4
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 5.8e-17 92.0 150 34.7
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.6e-17 91.7 126 39.7
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.7e-16 90.5 145 37.9
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 6.4e-16 88.6 121 40.5
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.4e-16 88.2 155 35.5
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-15 87.4 155 34.8
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-15 87.4 155 34.8
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.4e-15 85.5 161 35.4
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 5.4e-15 85.5 155 35.5
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-14 82.8 94 43.6
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 4.6e-14 82.4 137 35.0
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 4.6e-14 82.4 137 35.0
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 6.0e-14 82.0 156 32.7
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 7.9e-14 81.6 155 34.8
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-13 80.9 146 34.9
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-13 80.5 114 39.5
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.8e-13 80.5 154 33.8
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-13 80.1 138 37.7
C09p48560 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-13 79.3 108 47.2
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 6.7e-13 78.6 134 34.3
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 4.3e-12 75.9 132 34.8
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 4.3e-12 75.9 97 37.1
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 5.6e-12 75.5 137 32.8
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.1e-11 73.6 126 33.3
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 2.8e-11 73.2 129 32.6
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-11 72.8 150 34.0
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 3.6e-11 72.8 129 32.6
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.1e-11 71.6 100 38.0
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.8e-10 70.5 151 30.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 9.0e-10 68.2 119 39.5
AL7G39710 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 2.0e-09 67.0 146 32.2
BolC9t57698H Brassica oleracea HOM05D007210 ORTHO05D006152 4.5e-09 65.9 71 50.7
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 7.6e-09 65.1 157 29.3
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.2e-08 63.5 151 29.8
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 2.2e-08 63.5 125 35.2
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 3.8e-08 62.8 125 34.4
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 6.4e-08 62.0 126 31.0
AL7G39700 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 1.1e-07 61.2 130 30.8
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.4e-07 60.8 113 37.2
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 3.2e-07 59.7 128 33.6
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 3.2e-07 59.7 113 33.6
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 7.1e-07 58.5 129 30.2
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.6e-06 57.4 72 38.9
Carub.0007s2681 Capsella rubella HOM05D008242 ORTHO05D012602 2.1e-06 57.0 128 33.6
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 4.6e-06 55.8 47 51.1
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.0e-06 55.5 181 28.2
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 6.0e-06 55.5 85 38.8


User provided reference genes

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