Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 9.9e-187 656.8 360 100.0
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 5.6e-182 641.0 360 98.3
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 1.2e-176 623.2 344 100.0
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 1.3e-175 619.8 344 99.4
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 6.7e-175 617.5 344 99.1
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 1.2e-171 606.7 344 97.7
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.3e-170 603.2 344 93.6
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 1.3e-170 603.2 344 95.9
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.7e-170 602.8 344 97.1
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 4.9e-170 601.3 344 96.5
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 1.9e-169 599.4 345 96.5
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.9e-166 589.3 344 92.4
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.6e-160 569.7 361 87.0
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 8.5e-154 547.4 344 87.5
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.0e-150 536.2 376 81.9
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 9.7e-150 533.9 342 83.6
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 1.3e-149 533.5 346 83.8
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.7e-149 533.1 344 84.0
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.1e-148 530.4 342 85.4
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 1.8e-148 529.6 342 83.0
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 5.3e-148 528.1 348 81.3
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.2e-147 526.9 342 82.7
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 2.6e-147 525.8 342 85.7
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 3.4e-147 525.4 342 85.4
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 1.0e-146 523.9 342 82.2
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.0e-146 523.9 342 85.1
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 2.9e-146 522.3 342 81.6
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 2.9e-146 522.3 339 85.8
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 3.8e-146 521.9 342 81.9
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 5.0e-146 521.5 342 81.6
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 5.0e-146 521.5 342 81.6
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 8.5e-146 520.8 342 81.6
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.4e-145 520.0 340 85.0
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 1.4e-145 520.0 342 81.9
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 1.9e-145 519.6 342 84.8
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.6e-144 515.4 342 83.6
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 3.6e-144 515.4 342 81.6
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 4.7e-144 515.0 344 80.5
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 6.1e-144 514.6 342 83.9
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.0e-143 513.8 342 83.3
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 1.0e-143 513.8 342 80.1
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 1.8e-143 513.1 342 80.4
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 3.0e-143 512.3 342 82.2
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 6.7e-143 511.1 339 83.2
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 1.5e-142 510.0 342 79.5
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 2.0e-142 509.6 342 83.3
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 4.4e-142 508.4 342 79.2
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 5.7e-142 508.1 342 80.4
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 7.4e-142 507.7 345 81.2
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 9.7e-142 507.3 342 83.0
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 1.3e-141 506.9 353 81.0
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 1.3e-141 506.9 342 82.7
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 1.7e-141 506.5 342 79.2
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 2.8e-141 505.8 342 79.2
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 3.7e-141 505.4 342 79.2
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 4.8e-141 505.0 344 80.8
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 6.3e-141 504.6 342 78.7
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 6.3e-141 504.6 334 83.8
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 1.8e-140 503.1 332 80.4
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 3.1e-140 502.3 339 79.1
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 4.1e-140 501.9 342 78.7
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 1.5e-139 500.0 342 78.1
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.0e-138 497.3 344 76.7
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 2.2e-138 496.1 342 81.0
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 2.9e-138 495.7 328 81.4
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 6.5e-138 494.6 342 77.8
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.1e-137 493.8 343 78.4
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 1.9e-137 493.0 346 79.8
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 2.5e-137 492.7 344 79.7
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 7.2e-137 491.1 345 79.7
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 9.4e-137 490.7 339 78.8
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.2e-136 490.3 344 79.9
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 2.1e-136 489.6 342 80.4
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 4.7e-136 488.4 345 79.4
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 5.2e-135 485.0 350 74.3
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 5.2e-135 485.0 342 80.7
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 8.8e-135 484.2 344 77.9
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.0e-134 483.0 343 74.6
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.7e-133 479.9 342 78.7
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 1.1e-132 477.2 347 76.1
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 1.4e-132 476.9 339 79.4
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 1.4e-132 476.9 339 79.4
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 3.1e-132 475.7 344 77.0
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 5.3e-132 474.9 331 80.1
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 1.6e-131 473.4 344 76.2
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.0e-131 473.0 344 75.3
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 2.6e-131 472.6 344 76.7
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 2.6e-131 472.6 344 76.7
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 5.9e-131 471.5 344 77.0
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 5.9e-131 471.5 342 76.3
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 1.0e-130 470.7 339 78.5
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 2.9e-130 469.2 329 80.2
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 3.8e-130 468.8 341 76.5
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 3.8e-130 468.8 339 79.1
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 3.8e-130 468.8 344 76.2
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 8.5e-130 467.6 342 76.0
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.5e-129 466.8 342 76.3
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 1.5e-129 466.8 342 76.9
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.9e-129 466.5 344 76.7
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 7.2e-129 464.5 344 73.3
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 9.4e-129 464.2 342 77.5
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 8.0e-128 461.1 340 76.5
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 5.2e-127 458.4 344 76.2
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 8.8e-127 457.6 342 74.0
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.3e-125 453.8 329 76.6
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.4e-124 450.3 345 74.8
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 1.4e-124 450.3 335 74.3
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 7.0e-124 448.0 342 76.6
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 3.5e-123 445.7 344 74.1
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 8.5e-122 441.0 296 84.1
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 4.2e-121 438.7 350 72.6
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 4.7e-120 435.3 291 79.0
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 1.5e-118 430.3 358 67.9
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 6.3e-117 424.9 329 68.4
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.1e-116 424.1 345 72.2
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 3.1e-116 422.5 349 65.3
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.6e-112 410.2 344 63.4
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 3.2e-108 396.0 292 80.1
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 1.2e-107 394.0 345 71.0
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 1.2e-107 394.0 268 78.7
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.0e-106 391.0 357 66.7
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.9e-106 389.4 349 59.6
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.5e-105 387.1 270 78.1
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 4.3e-105 385.6 309 71.5
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 8.0e-104 381.3 289 74.0
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 8.0e-104 381.3 350 59.7
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.4e-102 375.9 297 66.3
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 5.0e-98 362.1 337 58.5
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 8.6e-98 361.3 342 64.3
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.3e-97 359.4 271 72.7
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 4.7e-96 355.5 334 59.3
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 5.8e-94 348.6 336 57.7
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 3.7e-93 345.9 222 84.2
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.9e-92 343.6 350 54.6
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 1.0e-90 337.8 246 74.4
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.7e-90 337.0 288 71.5
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 7.3e-89 331.6 174 99.4
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 3.4e-86 322.8 338 57.4
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.3e-81 305.8 224 76.3
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 7.9e-51 205.3 121 98.3
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.4e-47 194.5 124 83.9
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 1.6e-40 171.0 118 78.0
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.2e-38 164.9 117 76.1
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 1.0e-37 161.8 129 73.6
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 3.4e-30 136.7 97 74.2
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.7e-29 134.4 101 72.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 2.5e-28 130.6 82 74.4
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 3.6e-27 126.7 73 79.5
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 7.9e-27 125.6 81 85.2
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 2.3e-26 124.0 75 77.3
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 7.4e-25 119.0 134 57.5
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 3.8e-21 106.7 93 66.7
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.5e-20 104.8 104 49.0
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 7.2e-20 102.4 82 68.3
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 1.7e-16 91.3 58 87.9
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.7e-16 90.1 130 46.2
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 3.7e-16 90.1 76 64.5
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 8.5e-13 79.0 51 86.3
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 1.5e-12 78.2 57 73.7
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.9e-12 77.8 97 51.5
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 8.0e-11 72.4 42 83.3
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 8.8e-10 68.9 60 53.3
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.1e-07 62.0 38 89.5
BolC2t07549H Brassica oleracea HOM05D004327 ORTHO05D032179 3.1e-07 60.5 80 55.0
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 5.9e-06 56.2 249 24.5


User provided reference genes

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