Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 2.5e-44 181.8 96 100.0
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 2.8e-43 178.3 94 100.0
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 1.8e-42 175.6 94 97.9
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 8.3e-40 166.8 96 88.5
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.1e-39 166.4 96 87.5
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.8e-39 165.6 96 88.5
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 1.8e-39 165.6 96 87.5
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 2.4e-39 165.2 96 87.5
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 2.4e-39 165.2 96 87.5
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 2.4e-39 165.2 96 88.5
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.6e-38 162.5 94 87.2
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.6e-38 162.5 94 88.3
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.6e-38 162.5 94 88.3
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 6.6e-37 157.1 95 82.1
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 8.9e-34 146.7 92 78.3
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 3.4e-33 144.8 92 78.3
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 7.5e-33 143.7 92 77.2
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.3e-32 142.9 92 77.2
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 1.3e-32 142.9 92 77.2
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 2.9e-32 141.7 94 80.9
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 3.7e-32 141.4 92 75.0
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 4.9e-32 141.0 92 76.1
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 8.3e-32 140.2 92 73.9
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.1e-31 139.8 91 74.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.9e-31 139.0 79 91.1
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 1.9e-31 139.0 90 76.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 3.2e-31 138.3 92 75.0
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.2e-31 138.3 92 73.9
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 4.1e-31 137.9 90 75.6
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 4.1e-31 137.9 92 73.9
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 4.1e-31 137.9 92 77.2
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 4.1e-31 137.9 92 75.0
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 4.1e-31 137.9 92 73.9
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 5.4e-31 137.5 92 73.9
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 5.4e-31 137.5 92 77.2
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 7.0e-31 137.1 92 72.8
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 7.0e-31 137.1 91 74.7
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 9.2e-31 136.7 91 71.4
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 9.2e-31 136.7 91 72.5
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.2e-30 136.3 92 72.8
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.6e-30 136.0 90 74.4
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.6e-30 136.0 91 72.5
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.6e-30 136.0 91 71.4
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 2.7e-30 135.2 90 75.6
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.5e-30 134.8 90 73.3
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 3.5e-30 134.8 91 73.6
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 3.5e-30 134.8 92 72.8
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 4.6e-30 134.4 92 72.8
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 6.0e-30 134.0 91 74.7
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 6.0e-30 134.0 91 70.3
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 6.0e-30 134.0 91 72.5
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 7.8e-30 133.7 92 72.8
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 7.8e-30 133.7 92 72.8
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 7.8e-30 133.7 90 72.2
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.0e-29 133.3 92 72.8
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.3e-29 132.9 92 70.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.3e-29 132.9 90 73.3
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.3e-29 132.9 92 72.8
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.3e-29 132.9 91 71.4
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.3e-29 132.9 91 71.4
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.7e-29 132.5 92 71.7
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.7e-29 132.5 90 70.0
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 5.0e-29 131.0 92 70.7
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 6.6e-29 130.6 92 69.6
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 6.6e-29 130.6 92 70.7
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 8.6e-29 130.2 92 70.7
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.9e-28 129.0 92 65.2
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.5e-28 128.6 90 70.0
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 3.3e-28 128.3 90 71.1
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 5.6e-28 127.5 92 69.6
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 5.6e-28 127.5 92 69.6
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 7.3e-28 127.1 92 68.5
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.2e-27 126.3 91 64.8
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.2e-27 126.3 92 68.5
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.2e-27 126.3 92 68.5
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.2e-27 126.3 89 70.8
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.6e-27 125.9 91 68.1
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 1.6e-27 125.9 91 71.4
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 2.8e-27 125.2 92 67.4
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 3.6e-27 124.8 92 68.5
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 4.7e-27 124.4 90 66.7
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 6.2e-27 124.0 89 69.7
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 8.0e-27 123.6 92 67.4
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 5.2e-26 120.9 92 64.1
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 8.9e-26 120.2 92 65.2
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 1.2e-25 119.8 90 65.6
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.5e-25 119.4 92 64.1
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 2.0e-25 119.0 89 66.3
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 5.8e-25 117.5 76 76.3
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 9.8e-25 116.7 92 63.0
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.7e-24 114.8 76 73.7
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 3.7e-24 114.8 76 75.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 1.1e-23 113.2 92 58.7
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.4e-23 112.1 76 75.0
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 4.1e-23 111.3 76 73.7
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 7.1e-23 110.5 75 73.3
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 9.2e-23 110.2 75 72.0
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.6e-22 109.4 91 59.3
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 2.7e-22 108.6 91 59.3
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.0e-21 106.7 75 68.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 3.0e-21 105.1 92 58.7
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 1.5e-20 102.8 74 68.9
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 4.3e-20 101.3 74 67.6
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 9.5e-20 100.1 78 64.1
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.2e-19 99.8 93 59.1
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 2.1e-19 99.0 64 75.0
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 3.6e-19 98.2 75 69.3
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.3e-18 95.5 56 87.5
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 2.3e-18 95.5 90 57.8
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.5e-17 92.8 73 63.0
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 7.6e-17 90.5 64 70.3
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.7e-16 88.2 78 61.5
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 5.4e-15 84.3 87 50.6
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 4.6e-14 81.3 100 48.0
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 5.1e-13 77.8 62 66.1
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 5.8e-09 64.3 87 42.5
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 9.9e-09 63.5 37 81.1
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 2.9e-08 62.0 86 45.3
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 4.9e-08 61.2 34 85.3
BolC9t57826H Brassica oleracea HOM05D006914 ORTHO05D008583 1.4e-07 59.7 30 90.0


User provided reference genes

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