Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p11520 Brassica napus HOM05D000305 ORTHO05D000065 3.9e-80 301.6 172 100.0
A01p22430 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-60 236.5 148 93.2
C04p32140 Brassica napus HOM05D000305 ORTHO05D000065 4.4e-60 235.0 148 92.6
C09p66580 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-59 233.4 148 91.9
BraA10t43655Z Brassica rapa HOM05D000305 ORTHO05D000065 5.4e-58 228.0 153 88.9
A08p17390 Brassica napus HOM05D000305 ORTHO05D000065 4.3e-47 191.8 148 79.1
A08p17420 Brassica napus HOM05D000305 ORTHO05D000065 4.3e-47 191.8 148 79.1
BraA08t33699Z Brassica rapa HOM05D000305 ORTHO05D000065 4.3e-47 191.8 148 79.1
A07p14380 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-44 183.3 100 98.0
C03p74110 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-44 183.0 137 78.8
BolC5t31902H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-41 173.3 137 78.8
BcaC04g20913 Brassica carinata HOM05D000305 ORTHO05D000065 2.1e-41 172.9 137 78.1
C09p37990 Brassica napus HOM05D000305 ORTHO05D000065 2.1e-41 172.9 137 78.1
BolC9t56636H Brassica oleracea HOM05D000305 ORTHO05D000065 2.1e-41 172.9 137 78.1
C05p31760 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-40 170.2 137 77.4
BolC7t44063H Brassica oleracea HOM05D000305 ORTHO05D000065 3.0e-40 169.1 140 73.6
BcaC04g19371 Brassica carinata HOM05D000305 ORTHO05D000065 3.9e-40 168.7 156 69.9
C04p15310 Brassica napus HOM05D000305 ORTHO05D000065 5.1e-40 168.3 137 75.9
C09p56430 Brassica napus HOM05D000305 ORTHO05D000065 6.7e-40 167.9 148 72.3
C08p14080 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-39 166.8 137 75.2
A05p01940 Brassica napus HOM05D000305 ORTHO05D000065 3.3e-39 165.6 137 75.2
BraA04t17228Z Brassica rapa HOM05D000305 ORTHO05D000065 3.3e-39 165.6 137 75.2
C07p42760 Brassica napus HOM05D000305 ORTHO05D000065 2.1e-38 162.9 140 74.3
A04p16600 Brassica napus HOM05D000305 ORTHO05D000065 4.8e-38 161.8 137 73.7
A07p25510 Brassica napus HOM05D000305 ORTHO05D000065 4.8e-38 161.8 137 73.7
A05p26170 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-38 161.4 137 73.7
BcaC02g12385 Brassica carinata HOM05D000305 ORTHO05D000065 1.7e-35 153.3 100 84.0
BcaC07g38093 Brassica carinata HOM05D000305 ORTHO05D000065 1.7e-35 153.3 137 71.5
BcaC02g10680 Brassica carinata HOM05D000305 ORTHO05D000065 5.5e-34 148.3 146 71.2
C04p26600 Brassica napus HOM05D000305 ORTHO05D000065 5.5e-34 148.3 146 71.2
BolC4t24144H Brassica oleracea HOM05D000305 ORTHO05D000065 5.5e-34 148.3 146 71.2
C05p51350 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-32 143.7 146 68.5
BcaC09g50144 Brassica carinata HOM05D000305 ORTHO05D000065 5.1e-32 141.7 137 69.3
A06p27330 Brassica napus HOM05D000305 ORTHO05D000065 1.9e-31 139.8 137 67.9
BolC1t02780H Brassica oleracea HOM05D000305 ORTHO05D000065 1.3e-30 137.1 137 68.6
C01p28470 Brassica napus HOM05D000305 ORTHO05D000065 4.8e-30 135.2 137 67.9
A03p51660 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-29 133.7 145 62.8
BraA03t11643Z Brassica rapa HOM05D000305 ORTHO05D000065 1.4e-29 133.7 145 62.8
BcaC05g28327 Brassica carinata HOM05D000305 ORTHO05D000065 4.1e-29 132.1 144 64.6
C05p43930 Brassica napus HOM05D000305 ORTHO05D000065 4.1e-29 132.1 144 64.6
BolC5t33111H Brassica oleracea HOM05D000305 ORTHO05D000065 4.1e-29 132.1 144 64.6
BcaC06g33734 Brassica carinata HOM05D000305 ORTHO05D000065 3.6e-25 119.0 146 58.9
BcaC03g15150 Brassica carinata HOM05D000305 ORTHO05D000065 1.0e-24 117.5 137 63.5
C09p53510 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-24 117.1 146 59.6
BolC9t58227H Brassica oleracea HOM05D000305 ORTHO05D000065 1.3e-24 117.1 146 59.6
BcaC01g06254 Brassica carinata HOM05D000305 ORTHO05D000065 3.9e-24 115.5 140 59.3
C09p60590 Brassica napus HOM05D000305 ORTHO05D000065 3.9e-24 115.5 140 60.7
BolC4t23102H Brassica oleracea HOM05D000305 ORTHO05D000065 1.1e-23 114.0 83 73.5
A08p10510 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-22 110.5 139 55.4
BraA08t33050Z Brassica rapa HOM05D000305 ORTHO05D000065 1.3e-22 110.5 139 55.4
BraA02t07173Z Brassica rapa HOM05D000305 ORTHO05D000065 1.1e-21 107.5 139 54.0
A02p21510 Brassica napus HOM05D000305 ORTHO05D000065 5.3e-21 105.1 139 54.0
BcaC09g51522 Brassica carinata HOM05D000305 ORTHO05D000065 9.1e-21 104.4 94 63.8
A02p13830 Brassica napus HOM05D000305 ORTHO05D000065 2.9e-19 99.4 74 85.1
A07p24880 Brassica napus HOM05D000305 ORTHO05D000065 4.2e-18 95.5 48 100.0
A09p38170 Brassica napus HOM05D000305 ORTHO05D041802 7.2e-18 94.7 147 55.8
A09p52180 Brassica napus HOM05D013985 ORTHO05D041044 4.7e-17 92.0 170 47.1
BraA09t36996Z Brassica rapa HOM05D000305 ORTHO05D041044 4.7e-17 92.0 170 47.1
A01p13290 Brassica napus HOM05D000305 ORTHO05D000065 1.0e-16 90.9 147 53.7
BcaC06g33341 Brassica carinata HOM05D000305 ORTHO05D000065 5.1e-16 88.6 116 56.9
C05p16460 Brassica napus HOM05D000305 ORTHO05D000065 6.7e-16 88.2 70 68.6
BolC9t58891H Brassica oleracea HOM05D000305 ORTHO05D000065 6.7e-16 88.2 137 42.3
C06p14850 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-15 87.0 119 53.8
BolC2t10498H Brassica oleracea HOM05D000305 ORTHO05D041802 1.5e-15 87.0 119 53.8
BraA05t22065Z Brassica rapa HOM05D000305 ORTHO05D000065 2.6e-15 86.3 109 58.7
BcaB03g15252 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-14 82.8 66 80.3
BraA09t39464Z Brassica rapa HOM05D000305 ORTHO05D028083 3.1e-13 79.3 165 40.0
A08p01650 Brassica napus HOM05D000305 ORTHO05D000065 5.3e-13 78.6 132 51.5
BraA08t32218Z Brassica rapa HOM05D000305 ORTHO05D000065 5.3e-13 78.6 132 51.5
BraA07t28598Z Brassica rapa HOM05D000305 ORTHO05D000065 9.1e-13 77.8 132 52.3
A03p28310 Brassica napus HOM05D000305 ORTHO05D028083 3.4e-12 75.9 147 49.0
BcaC04g19741 Brassica carinata HOM05D000305 ORTHO05D000065 1.4e-10 70.5 92 59.8
BraA07t30895Z Brassica rapa HOM05D001056 ORTHO05D000902 4.2e-10 68.9 90 51.1
BcaC04g18867 Brassica carinata HOM05D000305 ORTHO05D000065 7.2e-10 68.2 80 52.5
C05p26560 Brassica napus HOM05D001056 ORTHO05D000902 9.4e-10 67.8 87 52.9
BcaC05g26607 Brassica carinata HOM05D001056 ORTHO05D000902 2.7e-09 66.2 90 50.0
BolC7t46294H Brassica oleracea HOM05D001056 ORTHO05D000902 3.6e-09 65.9 90 50.0
BcaB05g23131 Brassica carinata HOM05D000305 ORTHO05D000065 4.7e-09 65.5 143 37.8
BcaNung02728 Brassica carinata HOM05D001056 ORTHO05D000902 4.7e-09 65.5 81 50.6
C05p26130 Brassica napus HOM05D001056 ORTHO05D000902 6.1e-09 65.1 86 51.2
BcaC05g27327 Brassica carinata HOM05D000305 ORTHO05D000065 8.0e-09 64.7 134 36.6
BraA03t10960Z Brassica rapa HOM05D000305 ORTHO05D108585 1.0e-08 64.3 156 42.9
C03p74860 Brassica napus HOM05D000305 ORTHO05D000065 1.8e-08 63.5 147 46.3
BraA09t39218Z Brassica rapa HOM05D000305 ORTHO05D000065 2.3e-08 63.2 147 46.3
BolC2t07838H Brassica oleracea HOM05D000305 ORTHO05D000065 5.2e-08 62.0 147 45.6
BolC2t08774H Brassica oleracea HOM05D000305 ORTHO05D000065 5.2e-08 62.0 50 84.0
A05p10440 Brassica napus HOM05D000305 ORTHO05D000065 8.8e-08 61.2 50 80.0
BcaB01g01646 Brassica carinata HOM05D000305 ORTHO05D000065 1.1e-07 60.8 131 38.9
BcaNung06384 Brassica carinata HOM05D000305 ORTHO05D000605 2.6e-07 59.7 134 34.3
C05p54110 Brassica napus HOM05D000305 ORTHO05D000065 2.6e-07 59.7 134 34.3
BraA08t32137Z Brassica rapa HOM05D000305 ORTHO05D000065 3.3e-07 59.3 147 45.6
C05p14800 Brassica napus HOM05D000305 ORTHO05D000065 7.4e-07 58.2 134 33.6
BolC5t34076H Brassica oleracea HOM05D000305 ORTHO05D000065 7.4e-07 58.2 134 33.6
BolC1t01571H Brassica oleracea HOM05D000305 ORTHO05D000065 9.7e-07 57.8 93 40.9
BcaB05g24530 Brassica carinata HOM05D000305 ORTHO05D093680 2.2e-06 56.6 51 62.7
BcaB05g23657 Brassica carinata HOM05D000305 ORTHO05D000065 4.8e-06 55.5 131 37.4
BcaC05g28766 Brassica carinata HOM05D000305 ORTHO05D000065 6.3e-06 55.1 115 34.8
BolC1t01587H Brassica oleracea HOM05D000305 ORTHO05D000065 6.3e-06 55.1 147 42.9


User provided reference genes

Program Settings