Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.3e-103 379.8 203 100.0
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.3e-103 379.8 203 100.0
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.2e-91 340.1 204 92.6
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 2.6e-91 339.0 204 92.2
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 5.7e-91 337.8 205 92.2
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.2e-83 313.5 212 84.9
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.4e-67 258.8 213 74.6
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 5.4e-65 251.5 217 71.0
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.7e-56 222.6 226 62.4
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 5.1e-55 218.4 221 65.2
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 6.6e-55 218.0 216 64.4
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 6.6e-55 218.0 222 64.0
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 7.3e-54 214.5 217 66.4
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.9e-46 189.9 219 59.4
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 3.9e-39 165.6 215 54.9
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 3.9e-39 165.6 215 54.9
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 8.7e-39 164.5 175 60.6
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.1e-36 157.5 217 53.5
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.0e-34 151.0 215 51.6
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 1.3e-34 150.6 213 53.5
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 8.4e-34 147.9 216 50.0
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 5.5e-33 145.2 134 66.4
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 5.5e-33 145.2 134 66.4
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.2e-32 144.1 213 48.8
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 2.7e-32 142.9 212 47.6
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 6.0e-32 141.7 208 51.0
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 7.9e-32 141.4 134 67.2
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 7.9e-32 141.4 134 67.2
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.3e-31 140.6 209 51.2
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 3.0e-31 139.4 210 46.2
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.1e-30 137.5 218 47.7
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.9e-30 136.7 220 47.7
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.9e-30 136.7 222 48.6
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.5e-30 136.3 197 48.7
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 7.4e-30 134.8 218 47.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 9.6e-30 134.4 218 47.2
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 4.8e-29 132.1 212 46.7
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 4.8e-29 132.1 221 48.0
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.8e-29 132.1 219 47.5
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.4e-28 130.6 217 45.2
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 2.4e-28 129.8 184 52.2
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.4e-28 129.8 215 47.0
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.1e-28 129.4 208 47.1
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 5.3e-28 128.6 216 43.5
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 6.9e-28 128.3 210 44.8
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 6.9e-28 128.3 205 45.4
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.2e-27 127.5 214 45.3
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.5e-27 127.1 209 45.5
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.0e-27 126.7 211 47.4
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 2.0e-27 126.7 216 44.9
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.5e-27 125.6 195 43.6
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 7.6e-27 124.8 208 45.2
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.3e-26 124.0 205 45.4
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.2e-26 123.2 193 46.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 2.2e-26 123.2 215 43.7
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.9e-26 122.9 195 43.1
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 3.8e-26 122.5 214 44.4
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 6.5e-26 121.7 208 45.7
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.1e-25 120.9 201 42.8
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.1e-25 120.9 193 47.2
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.1e-25 120.9 211 42.7
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.9e-25 120.2 216 45.8
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.9e-25 120.2 202 42.1
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.5e-25 119.8 186 44.6
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 5.5e-25 118.6 200 44.5
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 7.2e-25 118.2 218 41.3
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 7.2e-25 118.2 224 43.8
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.7e-24 116.3 223 43.5
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 4.6e-24 115.5 191 48.2
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 4.6e-24 115.5 195 46.7
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 7.9e-24 114.8 191 48.2
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.9e-24 114.8 226 42.0
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.0e-23 114.4 217 41.9
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.0e-23 114.4 190 46.3
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.8e-23 113.6 205 43.9
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.3e-23 113.2 188 46.3
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.0e-23 112.8 226 42.0
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 3.0e-23 112.8 226 42.0
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 6.7e-23 111.7 216 40.7
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.7e-23 111.3 214 44.4
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 8.7e-23 111.3 220 40.5
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.1e-22 110.9 214 43.0
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.5e-22 110.5 199 44.2
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.5e-22 109.8 220 41.8
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 5.7e-22 108.6 205 42.4
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 9.7e-22 107.8 183 44.8
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 9.7e-22 107.8 196 44.4
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 9.7e-22 107.8 194 45.4
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 9.7e-22 107.8 204 39.7
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.3e-21 107.5 216 43.1
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 1.3e-21 107.5 219 41.6
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 1.6e-21 107.1 206 42.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 2.2e-21 106.7 197 44.2
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 6.3e-21 105.1 221 40.7
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 8.2e-21 104.8 197 43.1
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 5.3e-20 102.1 196 40.8
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 6.9e-20 101.7 226 37.2
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 6.9e-20 101.7 195 40.5
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 6.9e-20 101.7 229 40.2
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 9.0e-20 101.3 203 37.9
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 9.0e-20 101.3 217 39.6
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.2e-19 100.9 212 38.2
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.0e-19 100.1 193 40.4
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.6e-19 99.8 153 48.4
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 2.6e-19 99.8 201 37.3
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.3e-18 97.4 212 38.7
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 5.0e-18 95.5 201 38.3
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 5.0e-18 95.5 190 40.0
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 8.5e-18 94.7 187 39.6
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.2e-17 91.7 197 40.1
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 6.1e-16 88.6 210 37.6
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.4e-15 87.4 191 39.8
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.4e-15 87.4 223 37.2
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.8e-15 87.0 141 44.7
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.8e-15 87.0 141 44.7
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.5e-14 83.2 134 51.5
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 3.3e-14 82.8 269 33.8
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 5.7e-14 82.0 195 38.5
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 7.4e-14 81.6 196 40.3
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 6.3e-13 78.6 198 36.9
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 8.2e-13 78.2 209 36.4
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 3.1e-12 76.3 168 37.5
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 5.9e-11 72.0 166 38.6
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 7.2e-09 65.1 175 32.0
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.6e-08 63.9 158 33.5
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 6.7e-07 58.5 83 53.0
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 1.5e-06 57.4 108 39.8
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.4e-06 55.8 172 34.3


User provided reference genes

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