Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p09040 Brassica napus HOM05D009779 ORTHO05D013534 2.4e-46 188.3 87 100.0
C03p10520 Brassica napus HOM05D009779 ORTHO05D013534 2.4e-46 188.3 87 100.0
BolC3t13534H Brassica oleracea HOM05D009779 ORTHO05D013534 8.6e-44 179.9 83 100.0
BolC3t15237H Brassica oleracea HOM05D009779 ORTHO05D013534 1.7e-39 165.6 87 86.2
A09p26810 Brassica napus HOM05D009779 ORTHO05D013534 2.9e-39 164.9 87 86.2
BraA03t10228Z Brassica rapa HOM05D009779 ORTHO05D013534 2.9e-39 164.9 83 94.0
BraA09t38252Z Brassica rapa HOM05D009779 ORTHO05D013534 2.9e-39 164.9 87 86.2
C03p28790 Brassica napus HOM05D009779 ORTHO05D013534 6.4e-39 163.7 83 88.0
C03p28770 Brassica napus HOM05D009779 ORTHO05D013534 6.2e-34 147.1 87 74.7
BolC3t15236H Brassica oleracea HOM05D009779 ORTHO05D013534 5.2e-33 144.1 87 73.6
A03p24160 Brassica napus HOM05D009779 ORTHO05D013534 5.8e-32 140.6 87 72.4
BraA03t11625Z Brassica rapa HOM05D009779 ORTHO05D013534 5.8e-32 140.6 87 72.4
A05p32520 Brassica napus HOM05D009779 ORTHO05D013534 5.8e-16 87.4 87 48.3
BraA05t22078Z Brassica rapa HOM05D009779 ORTHO05D013534 5.8e-16 87.4 87 48.3
C05p49150 Brassica napus HOM05D009779 ORTHO05D013534 2.2e-15 85.5 87 47.1
BolC5t33657H Brassica oleracea HOM05D009779 ORTHO05D013534 2.2e-15 85.5 87 47.1
BolC5t31817H Brassica oleracea HOM05D009779 ORTHO05D013534 8.4e-15 83.6 87 48.3
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-11 73.2 46 65.2
BraA04t18722Z Brassica rapa HOM05D009779 ORTHO05D033680 4.8e-10 67.8 86 41.9
Thhalv10015663m.g Eutrema salsugineum HOM05D009157 ORTHO05D011114 1.4e-09 66.2 83 45.8
Carub.0003s2867 Capsella rubella HOM05D009157 ORTHO05D011114 4.0e-09 64.7 85 44.7
C05p49200 Brassica napus HOM05D009779 ORTHO05D028037 6.9e-09 63.9 90 42.2
C08p04600 Brassica napus HOM05D009157 ORTHO05D028203 2.0e-08 62.4 83 42.2
BolC8t47264H Brassica oleracea HOM05D009157 ORTHO05D028203 2.0e-08 62.4 83 42.2
A05p32550 Brassica napus HOM05D009779 ORTHO05D028037 2.6e-08 62.0 90 41.1
BraA05t22080Z Brassica rapa HOM05D009779 ORTHO05D028037 2.6e-08 62.0 90 41.1
BolC5t33662H Brassica oleracea HOM05D009779 ORTHO05D028037 3.4e-08 61.6 93 41.9
Thhalv10016013m.g Eutrema salsugineum HOM05D009157 ORTHO05D011114 3.4e-08 61.6 86 45.3
BraA08t32459Z Brassica rapa HOM05D009157 ORTHO05D028203 4.4e-08 61.2 83 42.2
A08p04330 Brassica napus HOM05D009157 ORTHO05D028203 5.8e-08 60.8 83 42.2
BNapus_Darmor_BZH_scaffold_232p00090 Brassica napus HOM05D009157 ORTHO05D011114 5.8e-08 60.8 85 44.7
C02p19560 Brassica napus HOM05D009157 ORTHO05D011114 5.8e-08 60.8 85 44.7
BolC2t08093H Brassica oleracea HOM05D009157 ORTHO05D011114 5.8e-08 60.8 85 44.7
BolC4t28532H Brassica oleracea HOM05D009779 ORTHO05D033680 5.8e-08 60.8 74 43.2
A02p11740 Brassica napus HOM05D009157 ORTHO05D011114 9.9e-08 60.1 85 44.7
BraA02t06239Z Brassica rapa HOM05D009157 ORTHO05D011114 9.9e-08 60.1 85 44.7
CARHR247500 Cardamine hirsuta HOM05D022922 ORTHO05D024512 2.2e-07 58.9 87 43.7
C07p59110 Brassica napus HOM05D022922 ORTHO05D024512 2.9e-07 58.5 88 40.9
AL2G14480 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 3.8e-07 58.2 90 38.9
Carub.0006s2661 Capsella rubella HOM05D009779 ORTHO05D011114 3.8e-07 58.2 84 38.1
AT4G08028 Arabidopsis thaliana HOM05D009779 ORTHO05D011114 6.4e-07 57.4 86 41.9
BolC7t46360H Brassica oleracea HOM05D022922 ORTHO05D024512 6.4e-07 57.4 88 39.8
CARHR037560 Cardamine hirsuta HOM05D009157 ORTHO05D011114 2.4e-06 55.5 85 42.4
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 7.1e-06 53.9 84 39.3


User provided reference genes

Program Settings