Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 6.9e-145 517.3 264 100.0
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 2.9e-74 282.7 266 63.9
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 4.9e-74 282.0 266 63.9
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 7.0e-73 278.1 266 62.8
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 9.2e-73 277.7 266 63.5
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 1.6e-72 276.9 266 62.8
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 6.8e-68 261.5 270 63.3
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 3.2e-65 252.7 262 60.3
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 9.2e-65 251.1 284 57.4
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 2.7e-56 223.0 269 53.5
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 4.6e-56 222.2 266 55.3
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 3.9e-55 219.2 269 53.2
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 3.1e-52 209.5 269 50.9
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 2.3e-39 166.8 275 45.1
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 2.4e-25 120.2 252 35.3
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 5.5e-25 119.0 276 34.8
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 3.5e-24 116.3 252 36.1
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.3e-23 113.6 269 34.6
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 3.0e-23 113.2 263 34.6
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 6.7e-23 112.1 255 35.3
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 8.7e-23 111.7 257 34.6
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 1.9e-22 110.5 255 34.9
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 9.6e-22 108.2 283 33.9
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.8e-21 106.7 262 34.4
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 1.8e-20 104.0 265 34.0
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.8e-20 104.0 253 34.0
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 6.9e-20 102.1 254 33.9
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 9.0e-20 101.7 256 33.6
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 2.0e-19 100.5 249 36.1
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 5.8e-19 99.0 259 32.0
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.8e-19 99.0 255 34.1
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 7.6e-19 98.6 262 31.3
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 7.6e-19 98.6 263 34.2
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.3e-18 97.8 249 33.3
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.3e-18 97.8 255 33.7
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 1.3e-18 97.8 256 33.6
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 2.2e-18 97.1 252 34.1
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 8.4e-18 95.1 284 31.3
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 2.5e-17 93.6 257 33.1
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 5.5e-17 92.4 256 32.4
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 5.5e-17 92.4 260 32.3
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 2.1e-16 90.5 252 31.3
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 6.0e-16 89.0 255 33.7
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 7.9e-16 88.6 253 32.0
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 1.8e-15 87.4 270 30.7
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 3.9e-15 86.3 251 31.1
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 5.1e-15 85.9 252 32.5
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 6.7e-15 85.5 260 31.9
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 8.7e-15 85.1 260 32.7
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 1.1e-14 84.7 260 32.7
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.3e-14 83.2 223 31.4
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 4.3e-14 82.8 259 30.5
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 5.7e-14 82.4 105 47.6
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 5.7e-14 82.4 105 47.6
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 5.7e-14 82.4 105 47.6
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 5.7e-14 82.4 247 30.0
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 5.7e-14 82.4 261 32.6
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 5.7e-14 82.4 316 28.5
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 9.6e-14 81.6 257 34.2
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 9.6e-14 81.6 258 30.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.6e-13 80.9 250 30.8
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.6e-13 80.9 255 33.3
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 2.1e-13 80.5 243 30.9
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 2.1e-13 80.5 267 33.0
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 2.8e-13 80.1 251 32.3
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 2.8e-13 80.1 258 29.8
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 3.7e-13 79.7 75 60.0
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 3.7e-13 79.7 75 60.0
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 3.7e-13 79.7 213 32.4
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 6.3e-13 79.0 243 32.1
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 8.2e-13 78.6 74 60.8
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 8.2e-13 78.6 89 55.1
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 8.2e-13 78.6 255 32.5
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.1e-12 78.2 254 30.3
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.1e-12 78.2 255 33.3
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.4e-12 77.8 254 30.3
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 4.1e-12 76.3 256 32.4
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 9.0e-12 75.1 255 32.2
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 9.0e-12 75.1 261 32.6
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 1.2e-11 74.7 263 30.8
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 1.2e-11 74.7 261 31.0
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 2.6e-11 73.6 265 30.2
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 5.9e-11 72.4 252 31.3
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 5.9e-11 72.4 244 29.5
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 5.9e-11 72.4 146 37.0
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 7.6e-11 72.0 213 31.0
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 6.5e-10 68.9 255 28.2
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 8.5e-10 68.6 251 28.3
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 8.5e-10 68.6 271 27.3
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 3.2e-09 66.6 292 27.1
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 4.2e-09 66.2 256 27.0
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 9.3e-09 65.1 266 26.7
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 2.1e-08 63.9 269 27.5
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 6.7e-07 58.9 238 28.2
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.5e-06 57.0 89 37.1
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 3.3e-06 56.6 65 50.8
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 4.3e-06 56.2 54 53.7


User provided reference genes

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