Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p06310 Brassica napus HOM05D004735 ORTHO05D005243 2.4e-136 488.8 244 100.0
C03p07280 Brassica napus HOM05D004735 ORTHO05D005243 1.5e-74 283.5 294 58.2
BolC3t13230H Brassica oleracea HOM05D004735 ORTHO05D005243 1.3e-73 280.4 294 57.8
Sp6g30050 Schrenkiella parvula HOM05D004735 ORTHO05D005243 1.8e-59 233.4 337 45.7
Carub.0006s1214 Capsella rubella HOM05D004735 ORTHO05D005243 2.7e-55 219.5 323 46.1
BolC9t59152H Brassica oleracea HOM05D004735 ORTHO05D005243 1.8e-54 216.9 283 50.9
C09p63170 Brassica napus HOM05D004735 ORTHO05D005243 5.2e-54 215.3 277 49.8
AL6G24610 Arabidopsis lyrata HOM05D004735 ORTHO05D005243 2.6e-53 213.0 330 44.2
AT5G13950 Arabidopsis thaliana HOM05D004735 ORTHO05D005243 7.5e-53 211.5 330 43.9
CARHR199450 Cardamine hirsuta HOM05D004735 ORTHO05D005243 1.3e-52 210.7 326 43.3
BcaB01g05325 Brassica carinata HOM05D004735 ORTHO05D005243 1.7e-52 210.3 260 51.5
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 4.8e-52 208.8 293 45.1
A10p24440 Brassica napus HOM05D004735 ORTHO05D005243 5.9e-50 201.8 291 45.0
Thhalv10012594m.g Eutrema salsugineum HOM05D004735 ORTHO05D005243 1.0e-49 201.1 324 43.8
Aa31LG11G15430 Aethionema arabicum HOM05D004735 ORTHO05D005243 7.5e-45 184.9 334 39.5
BcaC04g19065 Brassica carinata HOM05D004735 ORTHO05D005243 3.4e-37 159.5 129 68.2
THA.LOC104802362 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 7.5e-29 131.7 355 31.3
THA.LOC104821139 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 4.9e-28 129.0 351 33.0
Gohir.A11G063833 Gossypium hirsutum HOM05D004735 ORTHO05D005243 2.1e-15 87.0 264 31.1
Gohir.A11G063900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 2.1e-15 87.0 264 31.1
Gohir.D11G068200 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.7e-15 85.9 264 30.3
Gorai.007G073000 Gossypium raimondii HOM05D004735 ORTHO05D005243 3.1e-14 83.2 264 30.3
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 3.7e-12 76.3 278 28.8
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 6.4e-12 75.5 275 27.6
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 1.2e-10 71.2 266 26.3
Sabra02G0181300 Salix brachista HOM05D004735 ORTHO05D005243 2.1e-10 70.5 285 26.3
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 4.6e-10 69.3 264 27.3
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 6.0e-10 68.9 270 27.0
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 7.8e-10 68.6 268 29.9
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 7.8e-10 68.6 285 27.0
CANSAT64G0702 Cannabis sativa HOM05D004735 ORTHO05D005243 2.3e-09 67.0 264 28.4
Lalb_Chr21g0316971 Lupinus albus HOM05D004735 ORTHO05D005243 3.0e-09 66.6 56 58.9
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 5.1e-09 65.9 256 28.1
Ca_16589_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 1.9e-08 63.9 56 53.6
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 2.5e-08 63.5 263 28.1
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 4.3e-08 62.8 57 50.9
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 4.3e-08 62.8 57 50.9
Lalb_Chr22g0359831 Lupinus albus HOM05D004735 ORTHO05D005243 4.3e-08 62.8 53 60.4
RcHm_v2.0_Chr2g0176561 Rosa chinensis HOM05D004735 ORTHO05D005243 4.3e-08 62.8 272 25.7
Sabra14G0108800 Salix brachista HOM05D004735 ORTHO05D005243 5.6e-08 62.4 276 27.5
Glyma.16G147800 Glycine max HOM05D004735 ORTHO05D005243 7.3e-08 62.0 70 48.6
COL.COLO4_13380 Corchorus olitorius HOM05D004735 ORTHO05D005243 1.2e-07 61.2 295 25.8
Glyma.02G066700 Glycine max HOM05D004735 ORTHO05D005243 1.2e-07 61.2 55 56.4
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 1.2e-07 61.2 55 49.1
EL10Ac3g06356 Beta vulgaris HOM05D004735 ORTHO05D005243 1.6e-07 60.8 51 52.9
TWI60G1686 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 1.6e-07 60.8 260 28.1
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 2.1e-07 60.5 56 51.8
CsaV3_5G024940 Cucumis sativus L. HOM05D004735 ORTHO05D005243 2.1e-07 60.5 56 48.2
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 2.1e-07 60.5 266 25.9
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 2.1e-07 60.5 268 26.9
MELO3C005100.2 Cucumis melo HOM05D004735 ORTHO05D005243 2.8e-07 60.1 56 46.4
Lalb_Chr02g0156851 Lupinus albus HOM05D004735 ORTHO05D005243 2.8e-07 60.1 56 53.6
VMungo0464G0888 Vigna mungo HOM05D004735 ORTHO05D005243 3.6e-07 59.7 56 51.8
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 4.7e-07 59.3 256 26.2
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 4.7e-07 59.3 262 25.2
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 4.7e-07 59.3 299 25.8
arahy.Tifrunner.gnm1.ann1.X964XN Arachis hypogaea HOM05D004735 ORTHO05D005243 8.1e-07 58.5 56 53.6
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 8.1e-07 58.5 55 47.3
Ah.13g074210 Amaranthus hybridus HOM05D004735 ORTHO05D005243 1.1e-06 58.2 51 49.0
arahy.Tifrunner.gnm1.ann1.HAHJ6R Arachis hypogaea HOM05D004735 ORTHO05D005243 1.1e-06 58.2 56 53.6
Psat0s787g0080 Pisum sativum HOM05D004735 ORTHO05D005243 1.4e-06 57.8 56 53.6
TAR371G0169 Trochodendron aralioides HOM05D004735 ORTHO05D008917 1.4e-06 57.8 57 47.4
CSS0022550 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.8e-06 57.4 56 46.4
ClCG01G007860 Citrullus lanatus HOM05D004735 ORTHO05D005243 1.8e-06 57.4 56 46.4
PGR042G1405 Punica granatum HOM05D004735 ORTHO05D005243 2.4e-06 57.0 58 43.1
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 4.0e-06 56.2 56 50.0
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.0e-06 56.2 265 26.0
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 4.0e-06 56.2 266 25.6
Phvul.004G069600 Phaseolus vulgaris HOM05D004735 ORTHO05D005243 4.0e-06 56.2 56 50.0
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 6.8e-06 55.5 312 23.7
Medtr6g033235 Medicago truncatula HOM05D004735 ORTHO05D005243 6.8e-06 55.5 56 50.0
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 8.9e-06 55.1 50 54.0
Lj2g0010549 Lotus japonicus HOM05D004735 ORTHO05D005243 8.9e-06 55.1 293 24.9


User provided reference genes

Program Settings