Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p05020 Brassica napus HOM05D028671 ORTHO05D103826 6.8e-66 253.8 126 100.0
A01p30950 Brassica napus HOM05D000797 ORTHO05D103411 1.2e-41 173.3 89 97.8
C07p09850 Brassica napus HOM05D028671 ORTHO05D102260 5.8e-41 171.0 94 93.6
A02p41980 Brassica napus HOM05D028671 ORTHO05D005321 1.4e-39 166.4 95 89.5
C02p61890 Brassica napus HOM05D028671 ORTHO05D005321 3.6e-19 98.6 64 84.4
A03p17440 Brassica napus HOM05D000797 ORTHO05D102653 2.5e-12 75.9 36 97.2
A03p50920 Brassica napus HOM05D000797 ORTHO05D103187 2.5e-12 75.9 36 97.2
BraA03t11017Z Brassica rapa HOM05D000797 ORTHO05D015473 2.5e-12 75.9 36 97.2
BcaC07g37096 Brassica carinata HOM05D000797 ORTHO05D015473 9.6e-12 73.9 36 97.2
C08p04620 Brassica napus HOM05D000797 ORTHO05D015473 9.6e-12 73.9 36 97.2
BolC4t24587H Brassica oleracea HOM05D000797 ORTHO05D015473 9.6e-12 73.9 36 97.2
BcaC02g10301 Brassica carinata HOM05D000797 ORTHO05D015473 1.3e-11 73.6 56 69.6
BolC8t50484H Brassica oleracea HOM05D000797 ORTHO05D015473 1.6e-11 73.2 41 85.4
BcaC03g15480 Brassica carinata HOM05D000797 ORTHO05D015473 1.4e-10 70.1 36 94.4
Aa31LG2G6500 Aethionema arabicum HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
AL5G14500 Arabidopsis lyrata HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
AT3G25860 Arabidopsis thaliana HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
BcaB07g30629 Brassica carinata HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
BcaC06g31110 Brassica carinata HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
BcaC06g33946 Brassica carinata HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
A06p42430 Brassica napus HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
A09p25070 Brassica napus HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
C07p34880 Brassica napus HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
BolC7t44020H Brassica oleracea HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
BraA06t27158Z Brassica rapa HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
BraA09t38094Z Brassica rapa HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
Thhalv10004077m.g Eutrema salsugineum HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
Sp2g15100 Schrenkiella parvula HOM05D000797 ORTHO05D002835 5.8e-09 64.7 36 88.9
C03p88580 Brassica napus HOM05D004576 ORTHO05D005321 9.9e-09 63.9 36 91.7
BcaC04g21414 Brassica carinata HOM05D000797 ORTHO05D002835 1.7e-08 63.2 36 86.1
C09p32060 Brassica napus HOM05D000797 ORTHO05D002835 1.7e-08 63.2 36 86.1
C09p32070 Brassica napus HOM05D000797 ORTHO05D002835 1.7e-08 63.2 36 86.1
BolC9t56058H Brassica oleracea HOM05D000797 ORTHO05D002835 1.7e-08 63.2 36 86.1
CARHR146820 Cardamine hirsuta HOM05D000797 ORTHO05D002835 1.7e-08 63.2 36 86.1
THA.LOC104825703 Tarenaya hassleriana HOM05D000797 ORTHO05D002835 1.7e-08 63.2 36 83.3
Cc11_g10270 Coffea canephora HOM05D000797 ORTHO05D002835 2.2e-08 62.8 36 80.6
Carub.0005s0369 Capsella rubella HOM05D000797 ORTHO05D002835 2.9e-08 62.4 36 83.3
Ca_11182_v3 Cicer arietinum L. HOM05D000797 ORTHO05D002835 3.8e-08 62.0 36 83.3
COL.COLO4_07907 Corchorus olitorius HOM05D000797 ORTHO05D002835 3.8e-08 62.0 36 83.3
Gohir.A13G054200 Gossypium hirsutum HOM05D000797 ORTHO05D002835 3.8e-08 62.0 36 83.3
TWI75G1333 Tripterygium wilfordii HOM05D000797 ORTHO05D002835 3.8e-08 62.0 36 83.3
Actinidia16643 Actinidia chinensis HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 83.3
ClCG05G022820 Citrullus lanatus HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 80.6
MELO3C012235.2 Cucumis melo HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 80.6
CsaV3_5G034210 Cucumis sativus L. HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 80.6
Hma1.2p1_0406F.1_g146140 Hydrangea macrophylla HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 83.3
QL01p043790 Quercus lobata HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 83.3
Sed0023484 Sechium edule HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 80.6
TWI79G1537 Tripterygium wilfordii HOM05D000797 ORTHO05D002835 6.4e-08 61.2 36 80.6
Aqoxy3G00322 Aquilegia oxysepala HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 83.3
DCAR_023667 Daucus carota HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Duzib248G1601 Durio zibethinus HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Duzib251G0515 Durio zibethinus HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Glyma.01G081900 Glycine max HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Gohir.D13G067700 Gossypium hirsutum HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Gorai.013G077100 Gossypium raimondii HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
PSO063G6257 Papaver somniferum HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
PSO541G0733 Papaver somniferum HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
PSO675G1921 Papaver somniferum HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Psat6g228960 Pisum sativum HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
Rhsim09G0109400 Rhododendron simsii HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
vmacro10550 Vaccinium macrocarpon HOM05D000797 ORTHO05D002835 8.4e-08 60.8 36 80.6
C09p42710 Brassica napus HOM05D004576 ORTHO05D005321 1.1e-07 60.5 70 47.1
BolC9t57147H Brassica oleracea HOM05D004576 ORTHO05D005321 1.1e-07 60.5 70 47.1
CSS0015884 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 80.6
Migut.L01074 Erythranthe guttata HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 80.6
Migut.L01393 Erythranthe guttata HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 80.6
Lalb_Chr10g0099951 Lupinus albus HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 80.6
MD16G1044200 Malus domestica HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 75.0
Prupe.1G309100 Prunus persica HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 77.8
TAR374G0785 Trochodendron aralioides HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 83.3
TAR622G0319 Trochodendron aralioides HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 80.6
unitig_22.g5566 Utricularia gibba HOM05D000797 ORTHO05D002835 1.1e-07 60.5 36 75.0
Atru.chr11.1284 Acer truncatum HOM05D000797 ORTHO05D002835 1.4e-07 60.1 36 80.6
CANSAT64G0542 Cannabis sativa HOM05D000797 ORTHO05D002835 1.4e-07 60.1 36 80.6
Glyma.20G114500 Glycine max HOM05D000797 ORTHO05D002835 1.4e-07 60.1 36 80.6
Potri.010G126600 Populus trichocarpa HOM05D000797 ORTHO05D002835 1.4e-07 60.1 36 77.8
THA.LOC104805952 Tarenaya hassleriana HOM05D000797 ORTHO05D002835 1.4e-07 60.1 36 80.6
arahy.Tifrunner.gnm1.ann1.U2K3RD Arachis hypogaea HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 80.6
arahy.Tifrunner.gnm1.ann1.WLW17E Arachis hypogaea HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 80.6
CiPaw.15G083700 Carya illinoinensis HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 77.8
CiPaw.16G064100 Carya illinoinensis HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 77.8
Ciclev10031397m.g Citrus clementina HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 80.6
Lsat_1_v5_gn_8_39180 Lactuca sativa HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 80.6
Manes.14G100900 Manihot esculenta HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 77.8
Oeu057617.1 Olea europaea HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 77.8
TPR.G26310 Trifolium pratense HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 80.6
VMungo0720G3151 Vigna mungo HOM05D000797 ORTHO05D002835 1.9e-07 59.7 36 77.8
MSTRG.7675 Avicennia marina HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 75.0
Lalb_Chr04g0254761 Lupinus albus HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 80.6
MD13G1043400 Malus domestica HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 75.0
Peaxi162Scf00004g01917 Petunia axillaris HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 77.8
PGR119G1596 Punica granatum HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 77.8
RcHm_v2.0_Chr4g0435441 Rosa chinensis HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 75.0
SalBow8G4456 Salvia bowleyana HOM05D000797 ORTHO05D002835 2.4e-07 59.3 36 77.8
Dinv21103 Davidia involucrata HOM05D000797 ORTHO05D002835 3.2e-07 58.9 36 80.6
Lj2g0022754 Lotus japonicus HOM05D000797 ORTHO05D002835 3.2e-07 58.9 41 70.7
Phvul.007G026300 Phaseolus vulgaris HOM05D000797 ORTHO05D002835 3.2e-07 58.9 36 77.8
Cfa018608 Carpinus fangiana HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 77.8
Haze_17466 Corylus avellana HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 77.8
Medtr1g111140 Medicago truncatula HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 80.6
Hund25081 Selenicereus undatus HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 77.8
SGA_v2.0_scaffold124G33542 Striga asiatica HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 75.0
Thecc.02G357000 Theobroma cacao HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 77.8
unitig_747.g21469 Utricularia gibba HOM05D000797 ORTHO05D002835 4.2e-07 58.5 36 75.0
HanXRQChr02g0058711 Helianthus annuus HOM05D000797 ORTHO05D002835 5.5e-07 58.2 36 80.6
HanXRQChr08g0214191 Helianthus annuus HOM05D000797 ORTHO05D002835 5.5e-07 58.2 36 80.6
Sabra10G0096100 Salix brachista HOM05D000797 ORTHO05D002835 5.5e-07 58.2 36 75.0
HPP92_009638 Vanilla planifolia HOM05D000797 ORTHO05D002835 5.5e-07 58.2 36 77.8
MSTRG.829 Avicennia marina HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 75.0
Eucgr.G02332 Eucalyptus grandis HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 77.8
FvH4_4g27580 Fragaria vesca HOM05D000797 ORTHO05D002835 7.1e-07 57.8 53 58.5
FAN12G2994 Fragaria x ananassa HOM05D000797 ORTHO05D002835 7.1e-07 57.8 53 58.5
FAN12G3777 Fragaria x ananassa HOM05D000797 ORTHO05D002835 7.1e-07 57.8 53 58.5
Lj3A1017T53 Lonicera japonica HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 80.6
Lj6A761T55 Lonicera japonica HOM05D000797 ORTHO05D234007 7.1e-07 57.8 36 75.0
Nn3g17807 Nelumbo nucifera HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 77.8
Nitab4.5_0003407g0070 Nicotiana tabacum HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 77.8
Sc14g0007530 Simmondsia chinensis HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 75.0
GSVIVG01011909001 Vitis vinifera HOM05D000797 ORTHO05D002835 7.1e-07 57.8 36 77.8
Actinidia02582 Actinidia chinensis HOM05D000797 ORTHO05D002835 9.3e-07 57.4 36 72.2
ECA233G2767 Erigeron canadensis HOM05D000797 ORTHO05D002835 9.3e-07 57.4 36 77.8
Migut.E00327 Erythranthe guttata HOM05D000797 ORTHO05D002835 9.3e-07 57.4 48 58.3
FAN07G2182 Fragaria x ananassa HOM05D000797 ORTHO05D002835 9.3e-07 57.4 53 58.5
FAN22G2427 Fragaria x ananassa HOM05D000797 ORTHO05D002835 9.3e-07 57.4 53 58.5
Nitab4.5_0000145g0160 Nicotiana tabacum HOM05D000797 ORTHO05D002835 9.3e-07 57.4 36 77.8
Nitab4.5_0002214g0090 Nicotiana tabacum HOM05D000797 ORTHO05D002835 1.2e-06 57.0 36 75.0
SGA_v2.0_scaffold118G32467 Striga asiatica HOM05D000797 ORTHO05D002835 1.2e-06 57.0 63 52.4
Ah.03g137760 Amaranthus hybridus HOM05D000797 ORTHO05D002835 1.6e-06 56.6 36 75.0
EL10Ac6g14435 Beta vulgaris HOM05D000797 ORTHO05D002835 1.6e-06 56.6 36 75.0
CSS0015593 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D110176 1.6e-06 56.6 38 65.8
CAN.G656.25 Capsicum annuum HOM05D000797 ORTHO05D002835 1.6e-06 56.6 36 77.8
MBI15_g36153_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D002835 1.6e-06 56.6 36 75.0
SalBow8G2532 Salvia bowleyana HOM05D000797 ORTHO05D002835 1.6e-06 56.6 36 72.2
BcaB07g33114 Brassica carinata HOM05D000797 ORTHO05D002835 2.1e-06 56.2 36 69.4
BcaC08g43774 Brassica carinata HOM05D000797 ORTHO05D002835 2.1e-06 56.2 36 69.4
C06p11500 Brassica napus HOM05D000797 ORTHO05D002835 2.1e-06 56.2 36 69.4
BolC6t36283H Brassica oleracea HOM05D000797 ORTHO05D002835 2.1e-06 56.2 36 69.4
CSS0010770 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D002835 2.1e-06 56.2 44 59.1
CAN.G381.3 Capsicum annuum HOM05D000797 ORTHO05D115389 2.1e-06 56.2 36 75.0
Potri.008G119500 Populus trichocarpa HOM05D000797 ORTHO05D002835 2.1e-06 56.2 36 75.0
Sp1g29620 Schrenkiella parvula HOM05D000797 ORTHO05D002835 2.1e-06 56.2 36 69.4
CANSAT25G0114 Cannabis sativa HOM05D000797 ORTHO05D002835 2.7e-06 55.8 36 75.0
Rhsim11G0060300 Rhododendron simsii HOM05D000797 ORTHO05D002835 2.7e-06 55.8 36 69.4
RhsimUnG0069800 Rhododendron simsii HOM05D000797 ORTHO05D002835 2.7e-06 55.8 36 69.4
SMO367G0768 Selaginella moellendorffii HOM05D000797 ORTHO05D002835 2.7e-06 55.8 53 54.7
vmacro00776 Vaccinium macrocarpon HOM05D000797 ORTHO05D002835 2.7e-06 55.8 36 69.4
Os08g0431300 Oryza sativa ssp. japonica HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 72.2
Solyc05g009530.3 Solanum lycopersicum HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 77.8
Sopen05g005340 Solanum pennellii HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 77.8
THA.LOC104813373 Tarenaya hassleriana HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 69.4
VMungo0720G0340 Vigna mungo HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 69.4
Zm00001eb041730 Zea mays HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 72.2
Zm00001eb179540 Zea mays HOM05D000797 ORTHO05D002835 3.5e-06 55.5 36 72.2
Aa31LG9G14930 Aethionema arabicum HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
arahy.Tifrunner.gnm1.ann1.L5V71U Arachis hypogaea HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
arahy.Tifrunner.gnm1.ann1.XA2D1U Arachis hypogaea HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
A09p32080 Brassica napus HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
BraA09t38743Z Brassica rapa HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
AUR62002885 Chenopodium quinoa HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 72.2
Glyma.10G215400 Glycine max HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
Oeu017877.2 Olea europaea HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
Sc23g0001140 Simmondsia chinensis HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
TWI34G0369 Tripterygium wilfordii HOM05D000797 ORTHO05D002835 4.6e-06 55.1 36 69.4
ATR0665G066 Amborella trichopoda HOM05D000797 ORTHO05D002835 6.0e-06 54.7 36 72.2
Ca_10608_v3 Cicer arietinum L. HOM05D000797 ORTHO05D002835 6.0e-06 54.7 36 66.7
Lj7A293T49 Lonicera japonica HOM05D000797 ORTHO05D002835 6.0e-06 54.7 36 69.4
Phvul.003G035101 Phaseolus vulgaris HOM05D000797 ORTHO05D002835 6.0e-06 54.7 36 77.8
A03p38390 Brassica napus HOM05D065861 ORTHO05D101305 7.9e-06 54.3 35 77.1
A06p47450 Brassica napus HOM05D065861 ORTHO05D102613 7.9e-06 54.3 35 77.1
Carub.0001s3256 Capsella rubella HOM05D000797 ORTHO05D002835 7.9e-06 54.3 36 69.4
CDE05G3582 Ceratophyllum demersum HOM05D000797 ORTHO05D002835 7.9e-06 54.3 36 69.4
Thhalv10007561m.g Eutrema salsugineum HOM05D000797 ORTHO05D002835 7.9e-06 54.3 36 66.7
Lalb_Chr02g0141851 Lupinus albus HOM05D000797 ORTHO05D002835 7.9e-06 54.3 36 66.7
Sp6g15160 Schrenkiella parvula HOM05D004576 ORTHO05D005321 7.9e-06 54.3 70 44.3
Hund27080 Selenicereus undatus HOM05D000797 ORTHO05D002835 7.9e-06 54.3 36 66.7
TPR.G8818 Trifolium pratense HOM05D000797 ORTHO05D002835 7.9e-06 54.3 36 66.7
TAR381G1246 Trochodendron aralioides HOM05D000797 ORTHO05D002835 7.9e-06 54.3 42 59.5


User provided reference genes

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