Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 4.4e-46 187.6 92 100.0
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 4.4e-46 187.6 92 100.0
A08p17320 Brassica napus HOM05D036078 ORTHO05D098281 2.1e-40 168.7 82 100.0
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 4.7e-08 61.2 37 81.1
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.0e-07 60.1 37 81.1
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.0e-07 60.1 37 81.1
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.0e-07 60.1 37 81.1
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.4e-07 59.7 37 78.4
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.4e-07 59.7 37 78.4
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 1.8e-07 59.3 37 75.7
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.3e-07 58.9 37 78.4
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 3.0e-07 58.5 37 75.7
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 4.0e-07 58.2 37 78.4
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 5.2e-07 57.8 38 73.7
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 5.2e-07 57.8 37 78.4
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 5.2e-07 57.8 37 78.4
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 5.2e-07 57.8 37 75.7
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 5.2e-07 57.8 45 64.4
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 5.2e-07 57.8 37 75.7
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 73.0
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 6.8e-07 57.4 39 69.2
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 6.8e-07 57.4 37 75.7
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 8.9e-07 57.0 37 75.7
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.2e-06 56.6 37 73.0
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.2e-06 56.6 37 70.3
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.2e-06 56.6 37 75.7
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 1.2e-06 56.6 37 75.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.2e-06 56.6 37 73.0
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 73.0
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 75.7
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 73.0
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 73.0
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 73.0
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 73.0
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.5e-06 56.2 37 73.0
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 2.0e-06 55.8 37 75.7
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 2.0e-06 55.8 37 73.0
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 2.0e-06 55.8 37 73.0
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.6e-06 55.5 37 73.0
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 2.6e-06 55.5 37 73.0
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 2.6e-06 55.5 37 73.0
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 2.6e-06 55.5 37 73.0
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 3.4e-06 55.1 37 73.0
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 4.4e-06 54.7 37 70.3
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 5.7e-06 54.3 37 70.3
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 7.5e-06 53.9 37 73.0
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 7.5e-06 53.9 37 70.3
C01p42060 Brassica napus HOM05D011749 ORTHO05D015452 9.8e-06 53.5 69 44.9
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 67.6
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 73.0
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 73.0
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 73.0
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 73.0
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 9.8e-06 53.5 37 70.3


User provided reference genes

Program Settings