Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p03350 Brassica napus HOM05D007846 ORTHO05D010837 2.8e-77 292.4 208 100.0
C03p03790 Brassica napus HOM05D007846 ORTHO05D010837 1.1e-73 280.4 156 98.1
BcaB01g06047 Brassica carinata HOM05D007846 ORTHO05D010837 2.1e-64 249.6 137 99.3
BcaB01g05692 Brassica carinata HOM05D007846 ORTHO05D010837 4.7e-48 195.3 139 79.9
BcaB01g06048 Brassica carinata HOM05D007846 ORTHO05D010837 1.8e-39 166.8 94 98.9
BcaB01g06046 Brassica carinata HOM05D007846 ORTHO05D010837 9.9e-30 134.4 215 45.6
BolC3t12914H Brassica oleracea HOM05D007846 ORTHO05D010837 4.9e-29 132.1 221 44.3
Sp6g35340 Schrenkiella parvula HOM05D007846 ORTHO05D371621 4.6e-27 125.6 178 52.8
BraA03t09686Z Brassica rapa HOM05D007846 ORTHO05D010837 3.9e-26 122.5 210 45.2
A03p03340 Brassica napus HOM05D007846 ORTHO05D010837 8.7e-26 121.3 213 44.6
C09p69650 Brassica napus HOM05D007846 ORTHO05D010837 3.1e-23 112.8 119 58.8
BolC9t59708H Brassica oleracea HOM05D007846 ORTHO05D010837 3.1e-23 112.8 119 58.8
BcaC06g32487 Brassica carinata HOM05D007846 ORTHO05D010837 6.9e-23 111.7 98 70.4
Carub.0006s0651 Capsella rubella HOM05D007846 ORTHO05D010837 1.3e-21 107.5 86 70.9
AL6G17840 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 1.7e-21 107.1 86 72.1
AT5G07530 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.7e-21 107.1 113 58.4
BcaC06g32488 Brassica carinata HOM05D021341 ORTHO05D093304 2.2e-21 106.7 142 56.3
C08p18270 Brassica napus HOM05D007846 ORTHO05D010837 3.8e-21 105.9 100 68.0
BolC8t49462H Brassica oleracea HOM05D007846 ORTHO05D010837 8.4e-21 104.8 100 67.0
BraA08t34994Z Brassica rapa HOM05D007846 ORTHO05D010837 8.4e-21 104.8 100 67.0
BraA02t04921Z Brassica rapa HOM05D007846 ORTHO05D010837 1.4e-20 104.0 89 67.4
BcaC03g13199 Brassica carinata HOM05D007846 ORTHO05D010837 2.4e-20 103.2 90 65.6
C02p03150 Brassica napus HOM05D007846 ORTHO05D010837 2.4e-20 103.2 90 65.6
BolC2t06277H Brassica oleracea HOM05D007846 ORTHO05D010837 4.2e-20 102.4 89 66.3
BcaC06g32428 Brassica carinata HOM05D007846 ORTHO05D010837 5.4e-20 102.1 100 65.0
BcaC06g32486 Brassica carinata HOM05D007846 ORTHO05D010837 5.4e-20 102.1 86 70.9
C09p69640 Brassica napus HOM05D007846 ORTHO05D010837 5.4e-20 102.1 100 65.0
BolC9t59707H Brassica oleracea HOM05D007846 ORTHO05D010837 5.4e-20 102.1 100 65.0
CARHR205620 Cardamine hirsuta HOM05D007846 ORTHO05D010837 7.1e-20 101.7 102 57.8
A10p29250 Brassica napus HOM05D007846 ORTHO05D010837 1.2e-19 100.9 100 65.0
BraA10t44971Z Brassica rapa HOM05D007846 ORTHO05D010837 1.2e-19 100.9 100 65.0
C02p03180 Brassica napus HOM05D007846 ORTHO05D010837 2.7e-19 99.8 111 59.5
BolC2t06280H Brassica oleracea HOM05D007846 ORTHO05D010837 2.7e-19 99.8 111 59.5
Thhalv10013795m.g Eutrema salsugineum HOM05D007846 ORTHO05D195878 3.5e-19 99.4 173 45.1
BcaB05g21610 Brassica carinata HOM05D007846 ORTHO05D010837 1.3e-18 97.4 109 56.9
Sp6g35330 Schrenkiella parvula HOM05D007846 ORTHO05D021761 1.3e-18 97.4 111 52.3
BcaC03g13197 Brassica carinata HOM05D007846 ORTHO05D010837 3.0e-18 96.3 110 59.1
Carub.0006s0650 Capsella rubella HOM05D007846 ORTHO05D010837 3.9e-18 95.9 101 59.4
AL6G17910 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 3.3e-17 92.8 99 61.6
BraA02t04922Z Brassica rapa HOM05D007846 ORTHO05D010837 4.3e-17 92.4 111 57.7
Carub.0006s0658 Capsella rubella HOM05D007846 ORTHO05D010837 3.6e-16 89.4 83 62.7
AL6G17830 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 4.8e-16 89.0 110 52.7
AT5G07540 Arabidopsis thaliana HOM05D007846 ORTHO05D031404 4.8e-16 89.0 87 58.6
AL6G17850 Arabidopsis lyrata HOM05D007846 ORTHO05D031404 6.2e-16 88.6 87 58.6
AT5G07600 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 8.1e-16 88.2 114 53.5
Sp6g35350 Schrenkiella parvula HOM05D007846 ORTHO05D010837 1.1e-15 87.8 124 51.6
AT5G07520 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 6.9e-15 85.1 111 52.3
A10p29260 Brassica napus HOM05D007846 ORTHO05D010837 9.0e-15 84.7 165 40.0
BraA10t44972Z Brassica rapa HOM05D007846 ORTHO05D010837 9.0e-15 84.7 165 40.0
Thhalv10014560m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 1.2e-14 84.3 104 53.8
C09p69670 Brassica napus HOM05D007846 ORTHO05D021761 1.3e-13 80.9 111 46.8
BolC9t59710H Brassica oleracea HOM05D007846 ORTHO05D021761 1.3e-13 80.9 111 46.8
Thhalv10014587m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 1.3e-13 80.9 78 62.8
AT5G07510 Arabidopsis thaliana HOM05D007846 ORTHO05D038626 2.9e-13 79.7 91 57.1
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 8.4e-13 78.2 95 52.6
Aa31LG3G18890 Aethionema arabicum HOM05D007846 ORTHO05D010837 2.4e-12 76.6 116 43.1
BcaC06g32424 Brassica carinata HOM05D007846 ORTHO05D021761 2.4e-12 76.6 102 48.0
BcaC06g32425 Brassica carinata HOM05D021341 ORTHO05D024077 4.2e-12 75.9 138 45.7
C09p69660 Brassica napus HOM05D021341 ORTHO05D024077 4.2e-12 75.9 138 45.7
BolC9t59709H Brassica oleracea HOM05D021341 ORTHO05D024077 4.2e-12 75.9 138 45.7
CARHR205610 Cardamine hirsuta HOM05D007846 ORTHO05D000624 4.2e-12 75.9 94 48.9
A10p29300 Brassica napus HOM05D007846 ORTHO05D021761 5.4e-12 75.5 111 45.9
BraA10t44974Z Brassica rapa HOM05D007846 ORTHO05D021761 5.4e-12 75.5 111 45.9
A10p29270 Brassica napus HOM05D021341 ORTHO05D024077 7.1e-12 75.1 141 46.1
BraA10t44973Z Brassica rapa HOM05D021341 ORTHO05D024077 7.1e-12 75.1 141 46.1
Thhalv10015089m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 7.1e-12 75.1 102 50.0
AL6G17810 Arabidopsis lyrata HOM05D007846 ORTHO05D038626 2.7e-11 73.2 90 54.4
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 4.6e-11 72.4 94 45.7
BcaC06g32490 Brassica carinata HOM05D007846 ORTHO05D000624 6.0e-11 72.0 86 50.0
Sp6g35320 Schrenkiella parvula HOM05D000805 ORTHO05D000624 6.0e-11 72.0 99 49.5
A10p29310 Brassica napus HOM05D007846 ORTHO05D023961 1.0e-10 71.2 83 50.6
BraA10t44975Z Brassica rapa HOM05D007846 ORTHO05D023961 1.0e-10 71.2 83 50.6
BcaC06g32423 Brassica carinata HOM05D007846 ORTHO05D023961 1.8e-10 70.5 83 50.6
C09p69680 Brassica napus HOM05D007846 ORTHO05D023961 1.8e-10 70.5 83 50.6
BolC9t59711H Brassica oleracea HOM05D007846 ORTHO05D023961 1.8e-10 70.5 83 50.6
Sp6g35310 Schrenkiella parvula HOM05D007846 ORTHO05D000624 1.8e-10 70.5 95 46.3
AL6G17860 Arabidopsis lyrata HOM05D007846 ORTHO05D000624 5.1e-10 68.9 104 44.2
Aa31LG3G18860 Aethionema arabicum HOM05D007846 ORTHO05D000624 4.3e-09 65.9 78 46.2
AT5G07550 Arabidopsis thaliana HOM05D007846 ORTHO05D000624 4.3e-09 65.9 94 43.6
BcaB01g06049 Brassica carinata HOM05D007846 ORTHO05D000624 5.6e-09 65.5 79 50.6
BolC3t12915H Brassica oleracea HOM05D000805 ORTHO05D000624 5.6e-09 65.5 79 50.6
C03p03800 Brassica napus HOM05D000805 ORTHO05D000624 7.4e-09 65.1 79 50.6
Carub.0006s0652 Capsella rubella HOM05D007846 ORTHO05D031404 7.4e-09 65.1 87 47.1
AT5G07560 Arabidopsis thaliana HOM05D007846 ORTHO05D012592 1.6e-08 63.9 90 46.7
A03p03360 Brassica napus HOM05D000805 ORTHO05D000624 8.1e-08 61.6 79 48.1
BraA03t09687Z Brassica rapa HOM05D000805 ORTHO05D000624 8.1e-08 61.6 79 48.1
AL6G17870 Arabidopsis lyrata HOM05D007846 ORTHO05D012592 2.4e-07 60.1 91 44.0
BraA02t04924Z Brassica rapa HOM05D007846 ORTHO05D012592 4.0e-07 59.3 82 47.6
BcaB05g21609 Brassica carinata HOM05D000805 ORTHO05D012592 6.9e-07 58.5 82 47.6
CARHR205580 Cardamine hirsuta HOM05D007846 ORTHO05D012592 6.9e-07 58.5 71 50.7
CARHR205600 Cardamine hirsuta HOM05D007846 ORTHO05D012592 6.9e-07 58.5 95 41.1
Thhalv10014500m.g Eutrema salsugineum HOM05D000805 ORTHO05D012592 9.0e-07 58.2 91 41.8
C02p03200 Brassica napus HOM05D007846 ORTHO05D012592 1.2e-06 57.8 82 46.3
BolC2t06282H Brassica oleracea HOM05D007846 ORTHO05D012592 1.2e-06 57.8 82 46.3
C02p03190 Brassica napus HOM05D000805 ORTHO05D012592 1.5e-06 57.4 106 41.5
BolC2t06281H Brassica oleracea HOM05D000805 ORTHO05D012592 1.5e-06 57.4 106 41.5
Thhalv10015579m.g Eutrema salsugineum HOM05D000805 ORTHO05D196068 2.6e-06 56.6 82 45.1
Aa31LG3G18870 Aethionema arabicum HOM05D007846 ORTHO05D059289 5.8e-06 55.5 100 39.0
ECA233G2751 Erigeron canadensis HOM05D000805 ORTHO05D000624 7.6e-06 55.1 126 33.3
Sp6g35300 Schrenkiella parvula HOM05D000805 ORTHO05D012592 7.6e-06 55.1 91 39.6


User provided reference genes

Program Settings