Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p01830 Brassica napus HOM05D030516 ORTHO05D040325 4.4e-141 504.6 253 100.0
BraA02t08753Z Brassica rapa HOM05D030516 ORTHO05D040325 1.5e-120 436.4 212 99.5
A02p37710 Brassica napus HOM05D030516 ORTHO05D103518 1.3e-44 184.1 103 99.0
AT4G38830 Arabidopsis thaliana HOM05D000022 ORTHO05D000071 5.0e-36 155.6 236 44.5
A06p48890 Brassica napus HOM05D000022 ORTHO05D000071 1.5e-35 154.1 181 54.7
BraA06t27757Z Brassica rapa HOM05D000022 ORTHO05D000071 1.5e-35 154.1 181 54.7
Thhalv10024611m.g Eutrema salsugineum HOM05D000022 ORTHO05D000071 6.8e-33 145.2 198 51.0
Sp7g37000 Schrenkiella parvula HOM05D000022 ORTHO05D000071 4.9e-31 139.0 151 57.6
Carub.0007s0069 Capsella rubella HOM05D000022 ORTHO05D000071 1.0e-28 131.3 151 54.3
CARHR247910 Cardamine hirsuta HOM05D000022 ORTHO05D000071 2.3e-28 130.2 149 55.0
C07p63560 Brassica napus HOM05D000022 ORTHO05D000071 2.5e-27 126.7 233 43.8
BolC7t46769H Brassica oleracea HOM05D000022 ORTHO05D000071 2.5e-27 126.7 233 43.8
BcaNung01965 Brassica carinata HOM05D000022 ORTHO05D000071 1.6e-26 124.0 168 50.6
AL7G10710 Arabidopsis lyrata HOM05D000022 ORTHO05D000071 3.1e-25 119.8 202 44.6
C03p85120 Brassica napus HOM05D000199 ORTHO05D032469 8.6e-20 101.7 107 54.2
C03p85110 Brassica napus HOM05D030516 ORTHO05D096808 4.7e-18 95.9 74 70.3
BcaC02g11148 Brassica carinata HOM05D000116 ORTHO05D000133 2.0e-16 90.5 73 68.5
BolC3t20801H Brassica oleracea HOM05D000199 ORTHO05D032469 3.6e-10 69.7 82 51.2
CARHR216010 Cardamine hirsuta HOM05D000022 ORTHO05D000071 4.9e-07 59.3 189 29.1
AL3G46460 Arabidopsis lyrata HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
BcaB02g11535 Brassica carinata HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
BcaC04g23070 Brassica carinata HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
A09p10480 Brassica napus HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
C09p12450 Brassica napus HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
BolC9t54138H Brassica oleracea HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
BraA09t36693Z Brassica rapa HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
CARHR289400 Cardamine hirsuta HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
VMungo1215G3415 Vigna mungo HOM05D000969 ORTHO05D000899 1.4e-06 57.8 27 92.6
AL3G46470 Arabidopsis lyrata HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
AT2G14720 Arabidopsis thaliana HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
AT2G14740 Arabidopsis thaliana HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
BcaB08g34568 Brassica carinata HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
BcaC01g03091 Brassica carinata HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
A03p45260 Brassica napus HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
C03p56110 Brassica napus HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
BolC3t17898H Brassica oleracea HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
BraA03t13659Z Brassica rapa HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
Carub.0003s2877 Capsella rubella HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
Thhalv10022594m.g Eutrema salsugineum HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
Thhalv10022598m.g Eutrema salsugineum HOM05D000969 ORTHO05D000899 3.2e-06 56.6 27 88.9
Phvul.002G052000 Phaseolus vulgaris HOM05D000969 ORTHO05D000899 5.4e-06 55.8 27 85.2
Aa31sc449G50 Aethionema arabicum HOM05D000969 ORTHO05D000899 7.1e-06 55.5 27 85.2
Cpa.g.sc106.56 Carica papaya HOM05D000969 ORTHO05D000899 7.1e-06 55.5 27 81.5


User provided reference genes

Program Settings