Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.4e-108 396.4 205 100.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.4e-108 396.4 205 100.0
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 5.8e-99 364.4 209 94.3
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 8.7e-79 297.4 209 79.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.1e-70 270.4 209 73.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.1e-70 270.4 210 73.3
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 3.3e-70 268.9 214 72.0
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 4.3e-70 268.5 212 72.2
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 2.1e-69 266.2 215 71.6
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.0e-63 247.3 208 68.8
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.8e-60 236.5 187 67.4
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.1e-60 235.3 206 65.5
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 5.3e-60 235.0 175 70.3
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 5.9e-59 231.5 175 69.1
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.0e-58 230.7 210 63.3
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 3.8e-58 228.8 208 62.0
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 5.0e-58 228.4 223 57.8
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 8.5e-58 227.6 206 60.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.4e-57 226.9 219 59.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.9e-57 226.5 218 60.1
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 5.5e-57 224.9 215 60.9
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.6e-56 223.4 193 61.1
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.6e-56 223.4 199 59.8
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 2.1e-56 223.0 182 64.3
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.7e-56 222.6 166 69.3
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.7e-56 222.6 163 69.3
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 3.6e-56 222.2 213 58.7
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 3.6e-56 222.2 213 58.7
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.6e-56 222.2 214 58.4
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 6.1e-56 221.5 187 63.6
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.9e-56 221.1 151 72.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 7.9e-56 221.1 183 65.0
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-55 220.7 183 64.5
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 3.0e-55 219.2 214 58.9
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.0e-55 219.2 220 57.7
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 6.7e-55 218.0 208 57.2
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 6.7e-55 218.0 167 67.1
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 8.7e-55 217.6 215 58.1
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 8.7e-55 217.6 182 62.1
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 8.7e-55 217.6 182 63.2
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.5e-54 216.9 214 59.3
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.9e-54 216.5 183 63.4
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.9e-54 216.5 221 56.1
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.5e-54 216.1 166 66.3
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.5e-54 216.1 151 72.8
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 3.3e-54 215.7 169 65.1
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 3.3e-54 215.7 189 61.4
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 3.3e-54 215.7 152 68.4
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 4.3e-54 215.3 184 63.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 4.3e-54 215.3 185 64.3
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.3e-54 215.3 150 72.0
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 5.7e-54 214.9 174 62.6
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 9.7e-54 214.2 151 72.8
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 9.7e-54 214.2 178 62.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.3e-53 213.8 189 60.8
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.6e-53 213.4 150 70.0
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.2e-53 213.0 134 76.1
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.2e-53 213.0 151 68.9
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 2.8e-53 212.6 150 70.7
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 3.7e-53 212.2 213 58.2
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 3.7e-53 212.2 151 69.5
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 8.2e-53 211.1 224 58.9
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 8.2e-53 211.1 188 59.0
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.1e-52 210.7 153 68.6
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.1e-52 210.7 174 60.9
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.4e-52 210.3 184 60.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-52 210.3 191 61.3
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.8e-52 209.9 164 64.6
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 2.4e-52 209.5 150 69.3
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.1e-52 209.1 153 68.6
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 3.1e-52 209.1 188 60.1
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 5.3e-52 208.4 191 58.6
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 5.3e-52 208.4 130 79.2
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 6.9e-52 208.0 219 56.6
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.9e-52 208.0 152 68.4
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.2e-51 207.2 150 70.0
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.2e-51 207.2 133 75.2
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.2e-51 207.2 202 56.9
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.5e-51 206.8 151 66.9
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 3.4e-51 205.7 150 68.0
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 4.5e-51 205.3 150 68.7
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.3e-50 203.8 150 68.0
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.3e-50 203.8 154 65.6
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.7e-50 203.4 136 72.1
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.7e-50 203.4 167 63.5
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-49 200.3 204 55.4
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.9e-49 199.9 128 75.8
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.2e-49 198.7 148 70.9
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.2e-48 197.2 137 71.5
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 3.6e-48 195.7 154 63.0
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.0e-47 192.6 139 71.2
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.0e-47 192.6 165 64.8
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 3.9e-47 192.2 216 49.1
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 5.1e-47 191.8 178 60.7
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-44 184.1 214 50.9
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 3.1e-44 182.6 130 67.7
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.5e-43 180.3 117 72.6
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 6.5e-42 174.9 220 52.7
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 2.5e-41 172.9 162 57.4
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 4.2e-41 172.2 109 77.1
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.6e-38 162.9 108 73.1
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.2e-37 159.8 110 72.7
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.1e-32 143.3 163 53.4
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.4e-28 130.6 96 63.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.0e-27 126.7 68 95.6
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.0e-27 126.7 68 95.6
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.5e-26 121.7 140 52.1
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.5e-25 120.6 72 79.2
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 7.2e-25 118.2 148 40.5
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 1.2e-24 117.5 95 60.0
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 6.1e-24 115.2 151 47.0
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.4e-23 114.0 145 49.0
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.5e-22 110.5 100 59.0
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.8e-13 79.7 58 62.1
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.7e-10 70.5 52 63.5
BcaB05g21912 Brassica carinata HOM05D006610 ORTHO05D008447 2.8e-08 63.2 64 57.8
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.2e-06 57.8 65 53.8
Zm00001eb331770 Zea mays HOM05D006610 ORTHO05D008447 5.7e-06 55.5 64 46.9


User provided reference genes

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