Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.8e-61 238.4 120 100.0
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.8e-61 238.4 120 100.0
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 6.5e-50 200.7 120 87.5
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 2.1e-40 169.1 120 76.7
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 3.6e-40 168.3 120 76.7
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 7.9e-40 167.2 120 75.8
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 7.9e-40 167.2 120 75.8
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 7.9e-40 167.2 120 75.8
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 1.4e-39 166.4 118 75.4
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.8e-39 166.0 120 75.8
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 5.1e-39 164.5 129 73.6
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 5.7e-38 161.0 122 73.0
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 6.3e-37 157.5 120 73.3
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 6.3e-37 157.5 120 73.3
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 4.1e-36 154.8 96 84.4
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 7.0e-28 127.5 128 60.9
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 5.9e-27 124.4 125 60.8
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.5e-25 119.8 122 56.6
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 7.2e-25 117.5 128 53.9
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 4.4e-22 108.2 84 70.2
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.8e-20 102.8 102 60.8
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 5.3e-20 101.3 81 71.6
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 1.2e-19 100.1 81 71.6
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.2e-19 100.1 93 60.2
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 3.5e-19 98.6 126 52.4
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 3.5e-19 98.6 130 49.2
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 5.9e-19 97.8 79 65.8
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.0e-18 97.1 69 73.9
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.7e-18 96.3 130 50.8
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.7e-18 96.3 127 52.0
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 2.2e-18 95.9 89 61.8
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 3.8e-18 95.1 135 48.1
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 3.8e-18 95.1 128 51.6
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 5.0e-18 94.7 79 64.6
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 5.0e-18 94.7 128 50.8
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 5.0e-18 94.7 129 52.7
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 5.0e-18 94.7 121 49.6
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 8.5e-18 94.0 87 60.9
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.5e-17 93.2 110 51.8
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.5e-17 93.2 131 44.3
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 4.2e-17 91.7 148 48.0
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 5.5e-17 91.3 88 60.2
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 5.5e-17 91.3 87 58.6
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 9.4e-17 90.5 99 54.5
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.2e-16 90.1 135 47.4
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.6e-16 89.7 75 68.0
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.6e-16 89.7 128 49.2
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.7e-16 89.0 90 57.8
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 3.6e-16 88.6 150 46.7
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 3.6e-16 88.6 120 50.0
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 6.1e-16 87.8 128 50.8
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 8.0e-16 87.4 80 60.0
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 1.0e-15 87.0 130 45.4
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 2.3e-15 85.9 92 53.3
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.3e-15 85.9 92 53.3
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.3e-15 85.9 81 61.7
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 2.3e-15 85.9 75 64.0
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 2.3e-15 85.9 130 45.4
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 3.0e-15 85.5 121 47.9
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.0e-15 85.1 125 46.4
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 5.2e-15 84.7 77 63.6
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.2e-15 84.7 77 63.6
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.8e-15 84.0 78 61.5
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.2e-14 83.6 104 47.1
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 1.2e-14 83.6 131 43.5
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 2.0e-14 82.8 102 51.0
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-14 82.8 92 52.2
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 2.6e-14 82.4 115 49.6
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 2.6e-14 82.4 109 48.6
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 7.5e-14 80.9 99 48.5
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 7.5e-14 80.9 110 48.2
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 9.8e-14 80.5 94 52.1
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.8e-14 80.5 89 55.1
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.3e-13 80.1 89 55.1
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.7e-13 79.7 79 58.2
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 2.2e-13 79.3 91 50.5
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.2e-13 79.3 106 46.2
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.2e-13 79.3 81 56.8
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 2.8e-13 79.0 135 43.7
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 2.8e-13 79.0 127 41.7
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 4.8e-13 78.2 71 62.0
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 6.3e-13 77.8 86 50.0
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 6.3e-13 77.8 76 55.3
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.4e-12 76.6 82 53.7
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-12 76.6 61 65.6
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 2.4e-12 75.9 110 47.3
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 5.4e-12 74.7 93 53.8
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 5.4e-12 74.7 77 53.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.0e-12 74.3 76 60.5
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 7.0e-12 74.3 98 43.9
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 9.1e-12 73.9 91 53.8
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.2e-11 73.6 114 43.0
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 1.2e-11 73.6 88 55.7
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 1.6e-11 73.2 109 45.9
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 2.0e-11 72.8 97 44.3
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 2.7e-11 72.4 114 43.0
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 3.5e-11 72.0 81 53.1
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 4.5e-11 71.6 100 45.0
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.3e-10 70.1 62 59.7
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 1.3e-10 70.1 60 61.7
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 5.0e-10 68.2 86 45.3
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 8.6e-10 67.4 109 42.2
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 1.1e-09 67.0 92 52.2
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.5e-09 65.9 90 50.0
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.3e-09 65.5 70 54.3
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 7.2e-09 64.3 90 50.0
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 9.5e-09 63.9 109 41.3
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 1.2e-08 63.5 67 56.7
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.2e-08 63.5 121 38.8
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 2.1e-08 62.8 125 35.2
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 2.8e-08 62.4 85 45.9
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 6.1e-08 61.2 79 49.4
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 8.0e-08 60.8 127 36.2
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 8.0e-08 60.8 50 62.0
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 1.0e-07 60.5 88 46.6
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 1.4e-07 60.1 53 58.5
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.4e-07 60.1 61 54.1
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 3.0e-07 58.9 61 54.1
SalBow5G1753 Salvia bowleyana HOM05D006100 ORTHO05D007539 3.0e-07 58.9 108 40.7
Sc03g0002950 Simmondsia chinensis HOM05D006100 ORTHO05D007539 5.7e-06 54.7 44 63.6
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 7.5e-06 54.3 117 34.2


User provided reference genes

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