Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p42810 Brassica napus HOM05D003325 ORTHO05D003852 2.5e-53 211.8 105 100.0
A02p42850 Brassica napus HOM05D003325 ORTHO05D003852 6.7e-27 124.0 71 85.9
BraA02t09207Z Brassica rapa HOM05D003325 ORTHO05D003852 6.7e-27 124.0 71 85.9
BcaC03g18211 Brassica carinata HOM05D003325 ORTHO05D003852 1.1e-26 123.2 70 87.1
C02p62780 Brassica napus HOM05D003325 ORTHO05D003852 1.1e-26 123.2 70 87.1
BolC2t12350H Brassica oleracea HOM05D003325 ORTHO05D003852 1.1e-26 123.2 70 87.1
Sp2g26610 Schrenkiella parvula HOM05D003325 ORTHO05D003852 1.5e-26 122.9 71 84.5
BcaB07g29692 Brassica carinata HOM05D003325 ORTHO05D003852 9.7e-26 120.2 70 82.9
Thhalv10004048m.g Eutrema salsugineum HOM05D003325 ORTHO05D003852 4.5e-23 111.3 72 73.6
Carub.0008s2425 Capsella rubella HOM05D003325 ORTHO05D003852 1.5e-21 106.3 71 74.6
AT5G63520 Arabidopsis thaliana HOM05D003325 ORTHO05D003852 1.2e-20 103.2 71 69.0
CARHR277380 Cardamine hirsuta HOM05D003325 ORTHO05D003852 1.8e-19 99.4 72 68.1
AL8G40600 Arabidopsis lyrata HOM05D003325 ORTHO05D003852 3.0e-19 98.6 71 66.2
Aa31LG1G18420 Aethionema arabicum HOM05D003325 ORTHO05D003852 5.2e-19 97.8 72 66.7
THA.LOC104798940 Tarenaya hassleriana HOM05D003325 ORTHO05D003852 1.2e-12 76.6 75 50.7
FAN04G0895 Fragaria x ananassa HOM05D003325 ORTHO05D003852 2.8e-09 65.5 70 48.6
FAN13G2783 Fragaria x ananassa HOM05D003325 ORTHO05D003852 2.8e-09 65.5 70 48.6
FAN18G4277 Fragaria x ananassa HOM05D003325 ORTHO05D003852 2.8e-09 65.5 70 48.6
FvH4_5g08560 Fragaria vesca HOM05D003325 ORTHO05D003852 4.9e-09 64.7 65 50.8
Potri.004G005700 Populus trichocarpa HOM05D003325 ORTHO05D003852 1.4e-08 63.2 83 39.8
Thecc.03G131500 Theobroma cacao HOM05D003325 ORTHO05D003852 1.8e-08 62.8 85 38.8
ECA247G1358 Erigeron canadensis HOM05D003325 ORTHO05D003852 2.4e-08 62.4 73 45.2
Duzib068G1443 Durio zibethinus HOM05D003325 ORTHO05D003852 3.1e-08 62.0 85 41.2
Manes.06G120800 Manihot esculenta HOM05D003325 ORTHO05D003852 3.1e-08 62.0 86 40.7
Rhsim08G0191500 Rhododendron simsii HOM05D003325 ORTHO05D003852 3.1e-08 62.0 88 38.6
Ciclev10031319m.g Citrus clementina HOM05D003325 ORTHO05D003852 4.1e-08 61.6 85 34.1
Eucgr.B00098 Eucalyptus grandis HOM05D003325 ORTHO05D003852 4.1e-08 61.6 85 42.4
Eucgr.L01506 Eucalyptus grandis HOM05D003325 ORTHO05D003852 4.1e-08 61.6 84 42.9
TWI14G0714 Tripterygium wilfordii HOM05D003325 ORTHO05D003852 4.1e-08 61.6 85 37.6
CSS0012678 Camellia sinensis var. sinensis HOM05D003325 ORTHO05D003852 5.4e-08 61.2 79 40.5
MD06G1139200 Malus domestica HOM05D003325 ORTHO05D003852 5.4e-08 61.2 76 42.1
MD14G1155200 Malus domestica HOM05D003325 ORTHO05D003852 5.4e-08 61.2 76 42.1
Cpa.g.sc13.92 Carica papaya HOM05D003325 ORTHO05D003852 7.0e-08 60.8 85 36.5
CiPaw.11G005500 Carya illinoinensis HOM05D003325 ORTHO05D003852 1.2e-07 60.1 89 40.4
HanXRQChr13g0408791 Helianthus annuus HOM05D003325 ORTHO05D003852 1.2e-07 60.1 84 38.1
Potri.015G098700 Populus trichocarpa HOM05D003325 ORTHO05D003852 1.2e-07 60.1 85 36.5
Eucgr.B00095 Eucalyptus grandis HOM05D003325 ORTHO05D003852 1.6e-07 59.7 84 41.7
Lalb_Chr08g0237261 Lupinus albus HOM05D003325 ORTHO05D003852 1.6e-07 59.7 74 43.2
MBI11_g22691_MAGBIO Magnolia biondii HOM05D003325 ORTHO05D003852 1.6e-07 59.7 70 38.6
RcHm_v2.0_Chr7g0189831 Rosa chinensis HOM05D003325 ORTHO05D003852 2.7e-07 58.9 76 42.1
vmacro19124 Vaccinium macrocarpon HOM05D003325 ORTHO05D003852 2.7e-07 58.9 88 37.5
arahy.Tifrunner.gnm1.ann1.C4UAPE Arachis hypogaea HOM05D003325 ORTHO05D003852 3.5e-07 58.5 69 44.9
VMungo1309G3084 Vigna mungo HOM05D003325 ORTHO05D003852 3.5e-07 58.5 77 41.6
PGR083G0510 Punica granatum HOM05D003325 ORTHO05D003852 5.9e-07 57.8 90 34.4
Atru.chr6.1822 Acer truncatum HOM05D003325 ORTHO05D003852 1.0e-06 57.0 84 38.1
HanXRQChr13g0408811 Helianthus annuus HOM05D003325 ORTHO05D003852 1.0e-06 57.0 75 38.7
Oeu061142.1 Olea europaea HOM05D003325 ORTHO05D003852 1.0e-06 57.0 77 39.0
Sabra12G0073800 Salix brachista HOM05D003325 ORTHO05D003852 1.0e-06 57.0 81 38.3
Hund10145 Selenicereus undatus HOM05D003325 ORTHO05D003852 1.0e-06 57.0 69 40.6
Cfa018776 Carpinus fangiana HOM05D003325 ORTHO05D003852 1.7e-06 56.2 85 38.8
HanXRQChr13g0407901 Helianthus annuus HOM05D003325 ORTHO05D003852 1.7e-06 56.2 79 39.2
Lj1g0000526 Lotus japonicus HOM05D003325 ORTHO05D003852 1.7e-06 56.2 78 41.0
Ah.11g045510 Amaranthus hybridus HOM05D003325 ORTHO05D003852 2.3e-06 55.8 70 45.7
Aqoxy5G03311 Aquilegia oxysepala HOM05D003325 ORTHO05D003852 2.3e-06 55.8 96 34.4
Haze_07162 Corylus avellana HOM05D003325 ORTHO05D003852 2.3e-06 55.8 85 37.6
Duzib205G1086 Durio zibethinus HOM05D003325 ORTHO05D003852 2.3e-06 55.8 85 36.5
Gohir.D03G113900 Gossypium hirsutum HOM05D003325 ORTHO05D003852 2.3e-06 55.8 85 36.5
Gorai.003G120100 Gossypium raimondii HOM05D003325 ORTHO05D003852 2.3e-06 55.8 85 36.5
Potri.012G100500 Populus trichocarpa HOM05D003325 ORTHO05D003852 2.3e-06 55.8 84 34.5
Actinidia25563 Actinidia chinensis HOM05D003325 ORTHO05D003852 2.9e-06 55.5 85 34.1
arahy.Tifrunner.gnm1.ann1.XMC2I2 Arachis hypogaea HOM05D003325 ORTHO05D003852 2.9e-06 55.5 69 43.5
Glyma.04G196900 Glycine max HOM05D003325 ORTHO05D003852 2.9e-06 55.5 77 42.9
Lsat_1_v5_gn_1_33020 Lactuca sativa HOM05D003325 ORTHO05D003852 2.9e-06 55.5 73 41.1
QL10p002570 Quercus lobata HOM05D003325 ORTHO05D003852 2.9e-06 55.5 70 42.9
Gohir.A03G053200 Gossypium hirsutum HOM05D003325 ORTHO05D003852 3.8e-06 55.1 85 35.3
Hma1.2p1_0014F.1_g009260 Hydrangea macrophylla HOM05D003325 ORTHO05D003852 3.8e-06 55.1 79 36.7
Lj5A94T50 Lonicera japonica HOM05D003325 ORTHO05D003852 3.8e-06 55.1 81 35.8
Prupe.5G149200 Prunus persica HOM05D003325 ORTHO05D003852 3.8e-06 55.1 76 39.5
CANSAT80G0326 Cannabis sativa HOM05D003325 ORTHO05D003852 5.0e-06 54.7 74 35.1
CANSAT80G2651 Cannabis sativa HOM05D003325 ORTHO05D003852 5.0e-06 54.7 74 35.1
Glyma.06G168700 Glycine max HOM05D003325 ORTHO05D003852 6.6e-06 54.3 77 40.3
Nn4g22275 Nelumbo nucifera HOM05D003325 ORTHO05D003852 6.6e-06 54.3 58 46.6
Peaxi162Scf00130g00520 Petunia axillaris HOM05D003325 ORTHO05D003852 6.6e-06 54.3 80 35.0
SGA_v2.0_scaffold383G50423 Striga asiatica HOM05D003325 ORTHO05D003852 6.6e-06 54.3 70 37.1
HanXRQChr13g0407851 Helianthus annuus HOM05D003325 ORTHO05D003852 8.6e-06 53.9 75 41.3


User provided reference genes

Program Settings