Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p42090 Brassica napus HOM05D000130 ORTHO05D017638 2.0e-25 118.2 57 100.0
BraA02t09140Z Brassica rapa HOM05D000130 ORTHO05D017638 2.0e-25 118.2 57 100.0
C02p61970 Brassica napus HOM05D000130 ORTHO05D017638 8.2e-19 96.3 47 100.0
BcaC03g18130 Brassica carinata HOM05D000130 ORTHO05D017638 6.9e-18 93.2 47 97.9
BolC2t12258H Brassica oleracea HOM05D000130 ORTHO05D017638 6.9e-18 93.2 47 97.9
BolC2t12260H Brassica oleracea HOM05D000130 ORTHO05D017638 9.3e-15 82.8 58 72.4
BraA02t09143Z Brassica rapa HOM05D000130 ORTHO05D000772 1.2e-14 82.4 54 77.8
BcaC03g18132 Brassica carinata HOM05D000130 ORTHO05D000772 2.7e-14 81.3 54 75.9
BolC2t12259H Brassica oleracea HOM05D000130 ORTHO05D000772 2.7e-14 81.3 54 75.9
BcaC03g18133 Brassica carinata HOM05D029321 ORTHO05D027340 4.6e-14 80.5 58 70.7
A02p42130 Brassica napus HOM05D000130 ORTHO05D000772 4.6e-14 80.5 58 72.4
C02p62000 Brassica napus HOM05D000130 ORTHO05D000772 4.6e-14 80.5 58 72.4
BraA02t09144Z Brassica rapa HOM05D000130 ORTHO05D000772 4.6e-14 80.5 58 72.4
BcaB07g29793 Brassica carinata HOM05D000130 ORTHO05D000772 7.9e-14 79.7 58 72.4
Thhalv10005595m.g Eutrema salsugineum HOM05D000130 ORTHO05D000772 4.8e-11 70.5 58 67.2
Sp2g25380 Schrenkiella parvula HOM05D000130 ORTHO05D000772 8.2e-11 69.7 58 63.8
BcaC04g23426 Brassica carinata HOM05D000130 ORTHO05D000772 9.1e-10 66.2 56 66.1
C09p08440 Brassica napus HOM05D000130 ORTHO05D000772 9.1e-10 66.2 56 66.1
BolC9t53754H Brassica oleracea HOM05D000130 ORTHO05D000772 9.1e-10 66.2 56 66.1
A09p07550 Brassica napus HOM05D000130 ORTHO05D000772 1.5e-09 65.5 56 66.1
BraA09t36409Z Brassica rapa HOM05D000130 ORTHO05D000772 1.5e-09 65.5 56 66.1
Carub.0001s4274 Capsella rubella HOM05D000130 ORTHO05D000772 1.0e-08 62.8 56 64.3
AL8G39000 Arabidopsis lyrata HOM05D000130 ORTHO05D000772 1.3e-08 62.4 57 52.6
AT5G62180 Arabidopsis thaliana HOM05D000130 ORTHO05D000772 6.5e-08 60.1 57 52.6
THA.LOC104800395 Tarenaya hassleriana HOM05D000130 ORTHO05D000772 2.5e-07 58.2 52 53.8
THA.LOC104808000 Tarenaya hassleriana HOM05D000130 ORTHO05D000772 2.5e-07 58.2 52 53.8
Aa31LG11G1400 Aethionema arabicum HOM05D000032 ORTHO05D004313 4.2e-07 57.4 57 50.9
CARHR275970 Cardamine hirsuta HOM05D000130 ORTHO05D000772 1.6e-06 55.5 56 53.6
Carub.0004s2824 Capsella rubella HOM05D000130 ORTHO05D000772 4.7e-06 53.9 51 52.9
Carub.0008s2287 Capsella rubella HOM05D000130 ORTHO05D000772 4.7e-06 53.9 49 53.1
GSVIVG01027566001 Vitis vinifera HOM05D000130 ORTHO05D000772 4.7e-06 53.9 53 47.2
FAN01G1886 Fragaria x ananassa HOM05D000130 ORTHO05D000772 6.1e-06 53.5 57 43.9
Gohir.A11G083200 Gossypium hirsutum HOM05D000130 ORTHO05D000772 6.1e-06 53.5 53 45.3
Thecc.01G372400 Theobroma cacao HOM05D000130 ORTHO05D000772 6.1e-06 53.5 52 48.1
Dinv43735 Davidia involucrata HOM05D000130 ORTHO05D000772 7.9e-06 53.1 53 49.1
Gohir.D11G087300 Gossypium hirsutum HOM05D000130 ORTHO05D000772 7.9e-06 53.1 52 46.2
Gohir.D11G087440 Gossypium hirsutum HOM05D000130 ORTHO05D000772 7.9e-06 53.1 52 46.2
Gorai.007G093200 Gossypium raimondii HOM05D000130 ORTHO05D000772 7.9e-06 53.1 52 46.2
Lj7A525G53 Lonicera japonica HOM05D000130 ORTHO05D000772 7.9e-06 53.1 52 46.2
Rhsim07G0023900 Rhododendron simsii HOM05D000130 ORTHO05D000772 7.9e-06 53.1 52 50.0


User provided reference genes

Program Settings