Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 3.0e-187 658.7 416 100.0
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.7e-185 652.9 420 99.0
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.0e-182 643.7 416 98.6
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 3.8e-182 641.7 416 98.3
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 7.9e-180 634.0 420 97.1
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 4.2e-173 611.7 417 91.1
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 7.7e-167 590.9 417 83.5
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 7.7e-167 590.9 417 83.5
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 2.9e-166 589.0 413 86.9
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.9e-166 589.0 413 83.5
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 5.5e-165 584.7 421 83.6
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-164 583.2 417 82.7
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.6e-164 583.2 417 82.7
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.3e-161 573.5 412 87.4
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.1e-160 568.9 416 81.7
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 5.9e-159 564.7 410 90.5
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.2e-158 562.8 407 87.0
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 3.0e-155 552.4 418 88.5
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.7e-151 539.3 424 80.0
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 8.3e-137 491.1 421 77.7
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 8.9e-131 471.1 390 73.1
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 2.7e-127 459.5 406 72.2
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 6.0e-127 458.4 402 71.4
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.3e-126 457.2 406 70.0
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 1.3e-126 457.2 405 70.1
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.7e-126 456.8 406 64.8
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 2.3e-126 456.4 408 61.0
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.3e-125 452.6 408 73.8
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 4.3e-125 452.2 406 75.9
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 4.3e-125 452.2 406 71.7
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 5.6e-125 451.8 404 68.6
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 9.5e-125 451.1 395 71.9
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 9.5e-125 451.1 414 73.4
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 9.5e-125 451.1 412 66.7
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 1.2e-124 450.7 413 68.5
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.6e-124 450.3 403 71.0
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.8e-124 449.5 404 72.5
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 4.7e-124 448.7 399 63.7
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 4.7e-124 448.7 405 60.0
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.7e-124 448.7 409 73.6
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 4.7e-124 448.7 397 60.5
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 4.7e-124 448.7 401 64.8
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 4.7e-124 448.7 404 59.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 6.2e-124 448.4 404 59.9
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 6.2e-124 448.4 389 71.2
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.1e-123 447.6 425 70.8
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.4e-123 447.2 422 71.1
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.4e-123 447.2 394 71.6
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 2.3e-123 446.4 408 66.9
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 4.0e-123 445.7 405 73.3
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 6.8e-123 444.9 401 63.8
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 6.8e-123 444.9 397 72.3
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 8.9e-123 444.5 417 71.9
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.5e-122 443.7 405 68.4
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 7.6e-122 441.4 406 69.7
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 7.6e-122 441.4 413 69.5
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.3e-121 440.7 409 65.8
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 2.2e-121 439.9 405 73.1
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.2e-121 439.9 429 55.5
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 2.9e-121 439.5 401 69.6
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 6.4e-121 438.3 406 71.9
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 8.4e-121 438.0 418 71.5
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 8.4e-121 438.0 416 62.5
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.1e-120 437.6 414 73.7
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 1.1e-120 437.6 423 73.5
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.4e-120 436.4 418 62.2
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 2.4e-120 436.4 417 65.0
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 3.2e-120 436.0 395 71.6
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 3.5e-119 432.6 388 71.6
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.0e-118 431.0 399 57.1
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.7e-118 430.3 432 67.8
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.3e-118 429.9 394 69.5
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.1e-117 427.6 396 70.2
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.5e-117 427.2 394 69.8
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.5e-117 426.4 429 62.0
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 5.6e-117 425.2 407 65.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 7.3e-117 424.9 421 65.6
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.6e-116 423.7 403 63.8
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 6.2e-116 421.8 417 59.2
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 8.1e-116 421.4 348 76.4
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.2e-114 417.5 372 72.6
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 4.4e-114 415.6 401 55.4
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.9e-114 414.5 401 55.4
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.3e-113 414.1 438 52.5
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.7e-113 413.7 392 65.1
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.9e-112 410.2 411 65.5
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.4e-112 409.8 406 61.6
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.2e-112 409.5 413 64.9
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 4.2e-112 409.1 416 67.3
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.4e-112 408.7 417 65.9
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 2.3e-110 403.3 363 71.3
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 3.0e-110 402.9 383 69.5
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 6.6e-110 401.7 347 63.1
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.7e-110 401.4 416 66.1
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 4.3e-109 399.1 347 67.7
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 1.3e-108 397.5 397 65.2
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 8.1e-108 394.8 353 57.8
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 9.0e-107 391.3 358 65.1
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 2.7e-103 379.8 347 66.9
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 4.6e-103 379.0 395 62.0
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 7.9e-103 378.3 410 61.0
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-102 377.5 410 60.7
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 5.1e-102 375.6 396 55.3
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.3e-101 372.9 392 54.6
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 9.6e-101 371.3 313 66.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.1e-100 370.2 411 56.4
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 8.1e-100 368.2 375 55.7
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 6.9e-99 365.2 406 60.6
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.9e-99 365.2 406 59.9
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.5e-98 364.0 317 72.9
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 9.9e-98 361.3 347 55.3
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-97 360.9 407 56.3
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.8e-97 359.4 425 57.2
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 6.0e-95 352.1 361 66.2
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 2.3e-94 350.1 344 64.8
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.1e-93 347.8 347 58.2
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.6e-87 327.4 332 59.0
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.5e-85 320.1 176 84.1
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 6.9e-83 312.0 389 45.8
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.5e-82 310.8 433 43.4
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 5.9e-82 308.9 160 87.5
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.9e-82 308.9 329 48.6
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.7e-81 307.4 353 49.0
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 3.8e-81 306.2 356 48.3
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.1e-75 288.1 348 46.6
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 6.5e-73 278.9 375 56.3
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 4.2e-72 276.2 319 46.7
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 2.7e-63 246.9 291 65.3
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 3.6e-63 246.5 285 66.7
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.0e-62 245.0 132 84.1
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.1e-56 224.9 119 85.7
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 3.1e-51 206.8 301 62.5
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 4.1e-51 206.5 111 82.9
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.7e-47 193.0 113 75.2
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-44 184.9 169 54.4
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 5.5e-40 169.5 92 81.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 2.1e-39 167.5 337 33.5
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.0e-38 165.2 266 42.9
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 3.8e-33 146.7 169 53.3
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 3.5e-26 123.6 155 47.7
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.5e-24 118.2 272 31.2
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 5.2e-22 109.8 66 77.3
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 2.0e-13 81.3 39 92.3
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.4e-13 80.5 67 56.7


User provided reference genes

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