Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p41390 Brassica napus HOM05D007909 ORTHO05D000743 1.3e-213 746.5 487 100.0
BraA02t09081Z Brassica rapa HOM05D007909 ORTHO05D000743 1.9e-212 742.7 487 99.6
BolC2t12182H Brassica oleracea HOM05D007909 ORTHO05D000743 4.2e-172 608.6 519 74.0
C02p61340 Brassica napus HOM05D007909 ORTHO05D000743 4.3e-169 598.6 520 73.5
BcaC03g18074 Brassica carinata HOM05D007909 ORTHO05D000743 4.2e-164 582.0 544 69.7
BcaB07g34220 Brassica carinata HOM05D007909 ORTHO05D000743 5.5e-140 501.9 528 75.4
A03p46760 Brassica napus HOM05D007909 ORTHO05D000743 3.0e-114 416.4 504 63.7
C07p44800 Brassica napus HOM05D007909 ORTHO05D000743 9.8e-113 411.4 504 60.1
BcaC06g33179 Brassica carinata HOM05D007909 ORTHO05D000743 8.3e-112 408.3 504 59.7
BraA03t13798Z Brassica rapa HOM05D007909 ORTHO05D000743 8.3e-112 408.3 504 63.5
BolC7t45004H Brassica oleracea HOM05D007909 ORTHO05D000743 1.4e-111 407.5 504 59.7
AL8G37730 Arabidopsis lyrata HOM05D007909 ORTHO05D000743 1.5e-89 334.3 512 63.9
Thhalv10005634m.g Eutrema salsugineum HOM05D007909 ORTHO05D000743 5.8e-89 332.4 488 54.7
AT5G61090 Arabidopsis thaliana HOM05D007909 ORTHO05D000743 1.9e-87 327.4 511 62.2
CARHR274780 Cardamine hirsuta HOM05D007909 ORTHO05D000743 3.5e-70 270.0 494 49.4
Thhalv10004389m.g Eutrema salsugineum HOM05D007909 ORTHO05D000743 4.3e-60 236.5 455 40.0
Sp2g24370 Schrenkiella parvula HOM05D007909 ORTHO05D000743 9.0e-58 228.8 457 38.1
AL8G37760 Arabidopsis lyrata HOM05D007909 ORTHO05D000743 3.9e-53 213.4 457 37.6
Carub.0008s2179 Capsella rubella HOM05D007909 ORTHO05D000743 1.9e-52 211.1 456 37.3
AT5G61120 Arabidopsis thaliana HOM05D007909 ORTHO05D000743 4.3e-52 209.9 454 37.9
BolC7t45005H Brassica oleracea HOM05D007909 ORTHO05D000743 3.7e-51 206.8 263 49.0
A03p46770 Brassica napus HOM05D007909 ORTHO05D010605 2.4e-50 204.1 453 36.0
C07p44810 Brassica napus HOM05D007909 ORTHO05D010605 2.4e-50 204.1 275 47.3
BraA03t13799Z Brassica rapa HOM05D007909 ORTHO05D010605 2.4e-50 204.1 453 36.0
Aa31LG11G2230 Aethionema arabicum HOM05D007909 ORTHO05D000743 1.5e-49 201.4 454 36.1
Aa31LG11G2240 Aethionema arabicum HOM05D007909 ORTHO05D000743 7.6e-49 199.1 305 43.6
CARHR274810 Cardamine hirsuta HOM05D007909 ORTHO05D000743 9.1e-42 175.6 277 40.8
BcaC06g33178 Brassica carinata HOM05D007909 ORTHO05D010605 2.6e-41 174.1 257 44.4
THA.LOC104801226 Tarenaya hassleriana HOM05D007909 ORTHO05D000743 2.0e-33 147.9 311 34.7
TWI60G0473 Tripterygium wilfordii HOM05D007909 ORTHO05D000743 1.1e-18 99.0 178 36.5
Glyma.06G203100 Glycine max HOM05D007909 ORTHO05D000743 1.6e-17 95.1 203 32.0
Glyma.06G202900 Glycine max HOM05D007909 ORTHO05D000743 3.5e-17 94.0 228 30.7
Manes.06G085200 Manihot esculenta HOM05D007909 ORTHO05D010605 4.5e-17 93.6 197 35.0
Lj1g0000797 Lotus japonicus HOM05D007909 ORTHO05D000743 1.3e-16 92.0 204 35.3
CANSAT80G0086 Cannabis sativa HOM05D007909 ORTHO05D000743 3.8e-16 90.5 215 28.8
Potri.014G040100 Populus trichocarpa HOM05D007909 ORTHO05D000743 5.0e-16 90.1 218 33.5
FvH4_4g13540 Fragaria vesca HOM05D007909 ORTHO05D000743 7.2e-15 86.3 186 34.9
Glyma.04G163100 Glycine max HOM05D007909 ORTHO05D000743 7.2e-15 86.3 250 28.4
arahy.Tifrunner.gnm1.ann1.7R0RVH Arachis hypogaea HOM05D001093 ORTHO05D000743 1.2e-14 85.5 195 29.7
QL03p074129 Quercus lobata HOM05D007909 ORTHO05D000743 1.6e-14 85.1 198 32.8
Solyc06g066200.2 Solanum lycopersicum HOM05D008195 ORTHO05D000743 2.1e-14 84.7 189 34.9
Sopen06g021820 Solanum pennellii HOM05D008195 ORTHO05D000743 2.7e-14 84.3 189 34.9
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.7e-14 83.6 186 34.9
CiPaw.12G008400 Carya illinoinensis HOM05D007909 ORTHO05D000743 6.1e-14 83.2 142 40.8
QL03p074219 Quercus lobata HOM05D007909 ORTHO05D000743 1.4e-13 82.0 198 32.8
RcHm_v2.0_Chr7g0183021 Rosa chinensis HOM05D007909 ORTHO05D000743 1.4e-13 82.0 209 33.5
arahy.Tifrunner.gnm1.ann1.ER6SHV Arachis hypogaea HOM05D008195 ORTHO05D000743 1.8e-13 81.6 168 32.1
Ca_26164_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 1.8e-13 81.6 174 34.5
Haze_07714 Corylus avellana HOM05D007909 ORTHO05D000743 2.3e-13 81.3 209 33.5
CsaV3_1G005950 Cucumis sativus L. HOM05D007909 ORTHO05D000743 8.8e-13 79.3 205 30.2
Phvul.009G191900 Phaseolus vulgaris HOM05D007909 ORTHO05D000743 8.8e-13 79.3 213 30.0
MELO3C002025.2 Cucumis melo HOM05D007909 ORTHO05D000743 1.2e-12 79.0 216 30.6
Peaxi162Scf00201g00235 Petunia axillaris HOM05D008195 ORTHO05D000743 1.2e-12 79.0 172 32.6
Duzib084G0387 Durio zibethinus HOM05D001093 ORTHO05D000743 1.5e-12 78.6 124 42.7
QL03p074381 Quercus lobata HOM05D007909 ORTHO05D000743 1.5e-12 78.6 129 38.8
Sabra14G0029200 Salix brachista HOM05D007909 ORTHO05D000743 1.5e-12 78.6 184 34.8
Actinidia35035 Actinidia chinensis HOM05D001093 ORTHO05D000743 4.4e-12 77.0 210 28.1
Cfa019304 Carpinus fangiana HOM05D001093 ORTHO05D000743 7.5e-12 76.3 151 35.1
Cfa019324 Carpinus fangiana HOM05D007909 ORTHO05D000743 7.5e-12 76.3 129 40.3
Sopen06g024610 Solanum pennellii HOM05D008195 ORTHO05D000743 7.5e-12 76.3 146 34.9
Prupe.5G204200 Prunus persica HOM05D007909 ORTHO05D000743 9.8e-12 75.9 231 29.4
QL03p074255 Quercus lobata HOM05D007909 ORTHO05D000743 9.8e-12 75.9 207 31.9
QL12p030770 Quercus lobata HOM05D007909 ORTHO05D000743 9.8e-12 75.9 207 31.9
Psat0s231g0040 Pisum sativum HOM05D001093 ORTHO05D000743 1.3e-11 75.5 174 30.5
CSS0005519 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 2.2e-11 74.7 284 27.5
Haze_07687 Corylus avellana HOM05D007909 ORTHO05D000743 2.2e-11 74.7 241 29.0
VMungo1309G0161 Vigna mungo HOM05D007909 ORTHO05D000743 2.2e-11 74.7 154 33.8
FAN18G3687 Fragaria x ananassa HOM05D007909 ORTHO05D000743 2.8e-11 74.3 194 32.5
PGSC0003DMG400020472 Solanum tuberosum HOM05D008195 ORTHO05D000743 2.8e-11 74.3 222 27.9
vmacro16499 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 2.8e-11 74.3 219 30.1
Medtr3g025330 Medicago truncatula HOM05D001093 ORTHO05D010605 6.3e-11 73.2 206 29.6
Phvul.009G191600 Phaseolus vulgaris HOM05D007909 ORTHO05D000743 6.3e-11 73.2 124 37.1
Duzib205G1796 Durio zibethinus HOM05D001093 ORTHO05D010605 8.3e-11 72.8 138 36.2
FvH4_5g13930 Fragaria vesca HOM05D007909 ORTHO05D000743 1.1e-10 72.4 185 31.9
Sed0028074 Sechium edule HOM05D007909 ORTHO05D000743 1.1e-10 72.4 158 32.3
Dinv22785 Davidia involucrata HOM05D001093 ORTHO05D000743 1.8e-10 71.6 198 31.3
Lalb_Chr23g0273991 Lupinus albus HOM05D001093 ORTHO05D000743 3.1e-10 70.9 180 31.1
Rhsim12G0151100 Rhododendron simsii HOM05D001093 ORTHO05D000743 3.1e-10 70.9 187 29.4
Sc12g0006650 Simmondsia chinensis HOM05D001093 ORTHO05D000743 3.1e-10 70.9 182 30.2
Thecc.03G101000 Theobroma cacao HOM05D007909 ORTHO05D000743 7.0e-10 69.7 263 28.5
TPR.G19667 Trifolium pratense HOM05D007909 ORTHO05D000743 9.1e-10 69.3 187 29.9
Rhsim08G0146400 Rhododendron simsii HOM05D001093 ORTHO05D000743 1.2e-09 68.9 160 30.6
QL03p074169 Quercus lobata HOM05D007909 ORTHO05D000743 1.6e-09 68.6 115 37.4
Ciclev10020157m.g Citrus clementina HOM05D001093 ORTHO05D010605 2.0e-09 68.2 131 35.1
Solyc06g066140.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 2.0e-09 68.2 216 27.8
Actinidia16122 Actinidia chinensis HOM05D001093 ORTHO05D000743 3.5e-09 67.4 186 31.2
Duzib205G0904 Durio zibethinus HOM05D007909 ORTHO05D000743 5.9e-09 66.6 168 33.3
MD06G1202100 Malus domestica HOM05D001093 ORTHO05D000743 5.9e-09 66.6 170 29.4
MD14G1211300 Malus domestica HOM05D007909 ORTHO05D000743 7.7e-09 66.2 125 37.6
vmacro17606 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 2.9e-08 64.3 162 29.6
Lj5A103G64 Lonicera japonica HOM05D001093 ORTHO05D000743 3.8e-08 63.9 192 28.6
CANSAT80G0598 Cannabis sativa HOM05D007909 ORTHO05D000743 8.6e-08 62.8 175 29.1
QL10p019356 Quercus lobata HOM05D001093 ORTHO05D010605 4.2e-07 60.5 172 30.8
PGSC0003DMG401020463 Solanum tuberosum HOM05D008195 ORTHO05D010950 9.5e-07 59.3 130 33.8
PSO675G5193 Papaver somniferum HOM05D001093 ORTHO05D000743 1.2e-06 58.9 145 32.4
Aqoxy3G03628 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 2.1e-06 58.2 183 30.1
PSO541G3559 Papaver somniferum HOM05D001093 ORTHO05D000743 2.8e-06 57.8 160 31.2
VMungo1309G2619 Vigna mungo HOM05D007909 ORTHO05D000743 2.8e-06 57.8 128 30.5
Aa31LG5G24220 Aethionema arabicum HOM05D007909 ORTHO05D000743 3.6e-06 57.4 96 37.5
Hund02591 Selenicereus undatus HOM05D001093 ORTHO05D000743 4.7e-06 57.0 195 24.6
Aqoxy3G00533 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 6.1e-06 56.6 145 31.7
AUR62026754 Chenopodium quinoa HOM05D001093 ORTHO05D000743 6.1e-06 56.6 171 27.5
Migut.I00329 Erythranthe guttata HOM05D001093 ORTHO05D000743 8.0e-06 56.2 148 29.1
PGSC0003DMG400035870 Solanum tuberosum HOM05D008195 ORTHO05D010950 8.0e-06 56.2 115 33.0


User provided reference genes

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