Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40610 Brassica napus HOM05D006088 ORTHO05D007281 4.9e-70 267.7 135 100.0
A02p40510 Brassica napus HOM05D006088 ORTHO05D007281 1.6e-65 252.7 134 95.5
BcaB07g29905 Brassica carinata HOM05D006088 ORTHO05D007281 8.6e-59 230.3 165 75.8
BcaC03g17984 Brassica carinata HOM05D006088 ORTHO05D007281 5.6e-58 227.6 164 75.6
A02p40650 Brassica napus HOM05D006088 ORTHO05D007281 7.3e-58 227.3 165 75.2
BraA02t09012Z Brassica rapa HOM05D006088 ORTHO05D007281 7.3e-58 227.3 165 75.2
C02p60380 Brassica napus HOM05D006088 ORTHO05D007281 1.6e-57 226.1 164 75.0
BolC2t12093H Brassica oleracea HOM05D006088 ORTHO05D007281 1.6e-57 226.1 164 75.0
BcaC03g17985 Brassica carinata HOM05D006088 ORTHO05D007281 2.1e-57 225.7 163 75.5
Sp2g22980 Schrenkiella parvula HOM05D006088 ORTHO05D007281 2.1e-57 225.7 164 75.6
Thhalv10004042m.g Eutrema salsugineum HOM05D006088 ORTHO05D007281 7.5e-55 217.2 164 73.2
AT5G24340 Arabidopsis thaliana HOM05D006088 ORTHO05D007281 9.8e-55 216.9 164 72.6
Carub.0006s2216 Capsella rubella HOM05D006088 ORTHO05D007281 2.2e-54 215.7 164 72.0
CARHR189110 Cardamine hirsuta HOM05D006088 ORTHO05D007281 2.9e-54 215.3 164 72.6
Aa31LG11G3620 Aethionema arabicum HOM05D006088 ORTHO05D007281 1.1e-48 196.8 164 67.1
BcaC03g17987 Brassica carinata HOM05D006088 ORTHO05D007281 2.0e-47 192.6 164 67.7
AL6G35860 Arabidopsis lyrata HOM05D006088 ORTHO05D007281 2.3e-43 179.1 144 68.8
THA.LOC104814937 Tarenaya hassleriana HOM05D006088 ORTHO05D007281 3.0e-43 178.7 163 62.0
BraA02t09007Z Brassica rapa HOM05D006088 ORTHO05D007281 5.6e-42 174.5 89 97.8
Atru.chr12.2276 Acer truncatum HOM05D006088 ORTHO05D007281 2.2e-38 162.5 159 57.2
Atru.chr12.2268 Acer truncatum HOM05D006088 ORTHO05D007281 3.8e-38 161.8 159 57.2
Sabra15G0007500 Salix brachista HOM05D006088 ORTHO05D007281 8.4e-38 160.6 165 54.5
Potri.015G009500 Populus trichocarpa HOM05D006088 ORTHO05D007281 3.2e-37 158.7 165 54.5
Cpa.g.sc3.114 Carica papaya HOM05D006088 ORTHO05D007281 3.5e-36 155.2 159 56.6
Manes.01G039200 Manihot esculenta HOM05D006088 ORTHO05D007281 1.7e-35 152.9 165 53.9
Ciclev10020182m.g Citrus clementina HOM05D006088 ORTHO05D007281 2.3e-35 152.5 154 56.5
CiPaw.06G044500 Carya illinoinensis HOM05D006088 ORTHO05D007281 3.9e-35 151.8 153 54.2
QL09p007776 Quercus lobata HOM05D006088 ORTHO05D007281 3.9e-35 151.8 144 57.6
GSVIVG01038590001 Vitis vinifera HOM05D006088 ORTHO05D007281 5.1e-35 151.4 150 56.7
Duzib068G0049 Durio zibethinus HOM05D006088 ORTHO05D007281 6.6e-35 151.0 163 54.0
COL.COLO4_16809 Corchorus olitorius HOM05D006088 ORTHO05D007281 8.6e-35 150.6 144 56.9
Dinv29251 Davidia involucrata HOM05D006088 ORTHO05D007281 8.6e-35 150.6 154 55.2
CsaV3_3G019690 Cucumis sativus L. HOM05D006088 ORTHO05D007281 5.6e-34 147.9 161 52.8
Gohir.A09G186501 Gossypium hirsutum HOM05D006088 ORTHO05D007281 5.6e-34 147.9 163 54.0
Lj1A1022T49 Lonicera japonica HOM05D006088 ORTHO05D007281 7.3e-34 147.5 156 52.6
PGR042G2967 Punica granatum HOM05D006088 ORTHO05D007281 1.2e-33 146.7 156 51.9
TWI39G0339 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 2.8e-33 145.6 164 52.4
Gohir.D09G180600 Gossypium hirsutum HOM05D006088 ORTHO05D007281 3.6e-33 145.2 163 53.4
Sc25g0000960 Simmondsia chinensis HOM05D006088 ORTHO05D007281 4.7e-33 144.8 156 50.6
CANSAT21G0843 Cannabis sativa HOM05D006088 ORTHO05D007281 8.1e-33 144.1 154 51.9
MELO3C019378.2 Cucumis melo HOM05D006088 ORTHO05D007281 8.1e-33 144.1 161 52.8
Ca_12770_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 1.1e-32 143.7 156 51.9
Hma1.2p1_0707F.1_g207070 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 1.1e-32 143.7 152 52.6
Nn1g00333 Nelumbo nucifera HOM05D006088 ORTHO05D007281 1.1e-32 143.7 145 55.2
Actinidia34240 Actinidia chinensis HOM05D006088 ORTHO05D007281 1.4e-32 143.3 146 52.7
Gorai.006G202600 Gossypium raimondii HOM05D006088 ORTHO05D007281 2.4e-32 142.5 163 52.8
MBI12_g21748_MAGBIO Magnolia biondii HOM05D006088 ORTHO05D007281 2.4e-32 142.5 145 53.1
Thecc.03G202800 Theobroma cacao HOM05D006088 ORTHO05D007281 2.4e-32 142.5 164 53.0
CSS0005298 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 3.1e-32 142.1 146 54.1
CSS0044490 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 3.1e-32 142.1 146 54.1
ECA238G4490 Erigeron canadensis HOM05D006088 ORTHO05D007281 3.1e-32 142.1 154 51.3
Sed0011789 Sechium edule HOM05D006088 ORTHO05D007281 1.2e-31 140.2 142 57.0
TAR629G2736 Trochodendron aralioides HOM05D006088 ORTHO05D007281 1.2e-31 140.2 158 49.4
HanXRQChr04g0100451 Helianthus annuus HOM05D006088 ORTHO05D007281 1.5e-31 139.8 142 54.2
CAN.G481.44 Capsicum annuum HOM05D006088 ORTHO05D007281 2.0e-31 139.4 140 55.7
Eucgr.A01442 Eucalyptus grandis HOM05D006088 ORTHO05D007281 3.4e-31 138.7 149 53.0
Rhsim03G0211500 Rhododendron simsii HOM05D006088 ORTHO05D007281 4.4e-31 138.3 146 52.7
Phvul.001G074500 Phaseolus vulgaris HOM05D006088 ORTHO05D007281 5.8e-31 137.9 157 50.3
Prupe.2G314700 Prunus persica HOM05D006088 ORTHO05D007281 1.3e-30 136.7 160 51.9
Glyma.14G150400 Glycine max HOM05D006088 ORTHO05D007281 3.8e-30 135.2 157 49.7
Lj5g0026434 Lotus japonicus HOM05D006088 ORTHO05D007281 3.8e-30 135.2 144 54.2
Solyc03g082850.3 Solanum lycopersicum HOM05D006088 ORTHO05D007281 3.8e-30 135.2 140 55.0
Sopen03g022590 Solanum pennellii HOM05D006088 ORTHO05D007281 3.8e-30 135.2 140 55.0
FAN10G3213 Fragaria x ananassa HOM05D006088 ORTHO05D007281 4.9e-30 134.8 157 51.0
Oeu037044.1 Olea europaea HOM05D006088 ORTHO05D007281 4.9e-30 134.8 143 53.8
FAN01G2391 Fragaria x ananassa HOM05D006088 ORTHO05D007281 6.4e-30 134.4 157 50.3
RcHm_v2.0_Chr1g0381781 Rosa chinensis HOM05D006088 ORTHO05D007281 6.4e-30 134.4 141 55.3
Glyma.13G078800 Glycine max HOM05D006088 ORTHO05D007281 1.1e-29 133.7 157 48.4
PGSC0003DMG400018542 Solanum tuberosum HOM05D006088 ORTHO05D007281 1.4e-29 133.3 140 54.3
SGA_v2.0_scaffold44G16827 Striga asiatica HOM05D006088 ORTHO05D007281 1.4e-29 133.3 176 46.0
FAN03G2371 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.9e-29 132.9 141 54.6
FAN03G2860 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.9e-29 132.9 141 54.6
Peaxi162Scf00740g00327 Petunia axillaris HOM05D006088 ORTHO05D007281 1.9e-29 132.9 140 52.9
HPP92_025612 Vanilla planifolia HOM05D006088 ORTHO05D007281 1.9e-29 132.9 140 52.1
FAN10G3559 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.4e-29 132.5 157 50.3
PSO063G3091 Papaver somniferum HOM05D006088 ORTHO05D007281 3.2e-29 132.1 153 49.7
Psat6g035960 Pisum sativum HOM05D006088 ORTHO05D007281 4.2e-29 131.7 156 50.6
SalBow4G2097 Salvia bowleyana HOM05D006088 ORTHO05D007281 9.3e-29 130.6 136 52.2
Cc02_g01220 Coffea canephora HOM05D006088 ORTHO05D007281 1.2e-28 130.2 142 52.8
FvH4_7g32160 Fragaria vesca HOM05D006088 ORTHO05D007281 1.2e-28 130.2 141 53.9
TPR.G24535 Trifolium pratense HOM05D006088 ORTHO05D007281 1.6e-28 129.8 156 50.6
EL10Ac3g05241 Beta vulgaris HOM05D006088 ORTHO05D007281 2.7e-28 129.0 157 46.5
Lalb_Chr04g0253281 Lupinus albus HOM05D006088 ORTHO05D007281 2.7e-28 129.0 154 50.0
MD07G1295100 Malus domestica HOM05D006088 ORTHO05D007281 2.7e-28 129.0 154 49.4
vmacro06403 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 2.7e-28 129.0 146 50.7
AUR62035569 Chenopodium quinoa HOM05D006088 ORTHO05D007281 6.0e-28 127.9 151 49.0
FAN06G1538 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.0e-27 127.1 141 53.2
Nitab4.5_0002780g0060 Nicotiana tabacum HOM05D006088 ORTHO05D007281 1.7e-27 126.3 140 53.6
AUR62006059 Chenopodium quinoa HOM05D006088 ORTHO05D007281 3.0e-27 125.6 151 48.3
DCAR_014551 Daucus carota HOM05D006088 ORTHO05D007281 3.9e-27 125.2 139 50.4
Migut.F00188 Erythranthe guttata HOM05D006088 ORTHO05D007281 5.1e-27 124.8 141 47.5
MSTRG.27009 Avicennia marina HOM05D006088 ORTHO05D007281 1.1e-26 123.6 143 49.7
A02p40390 Brassica napus HOM05D006088 ORTHO05D007281 1.5e-26 123.2 117 63.2
A02p40350 Brassica napus HOM05D006088 ORTHO05D007281 2.5e-26 122.5 94 74.5
vmacro06404 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 4.3e-26 121.7 189 40.7
Os07g0452400 Oryza sativa ssp. japonica HOM05D006088 ORTHO05D007281 9.6e-26 120.6 139 48.2
arahy.Tifrunner.gnm1.ann1.W8KES2 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.6e-25 119.8 138 50.0
Hund21022 Selenicereus undatus HOM05D006088 ORTHO05D007281 2.8e-25 119.0 144 47.9
ATR0757G203 Amborella trichopoda HOM05D006088 ORTHO05D007281 6.2e-25 117.9 144 48.6
Zm00001eb096690 Zea mays HOM05D006088 ORTHO05D007281 8.1e-25 117.5 136 49.3
arahy.Tifrunner.gnm1.ann1.F1TPPK Arachis hypogaea HOM05D006088 ORTHO05D007281 2.4e-24 115.9 155 46.5
unitig_52.g17713 Utricularia gibba HOM05D006088 ORTHO05D007281 4.0e-24 115.2 161 41.6
Aqoxy5G04265 Aquilegia oxysepala HOM05D006088 ORTHO05D007281 5.3e-24 114.8 158 43.0
DCAR_010586 Daucus carota HOM05D006088 ORTHO05D007281 9.0e-24 114.0 134 49.3
arahy.Tifrunner.gnm1.ann1.IYG6N7 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.9e-21 106.3 140 45.7
arahy.Tifrunner.gnm1.ann1.GS5K3D Arachis hypogaea HOM05D006088 ORTHO05D007281 3.0e-19 99.0 141 45.4
Hma1.2p1_0707F.1_g207060 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 2.5e-18 95.9 113 46.9
Haze_00245 Corylus avellana HOM05D006088 ORTHO05D007281 5.6e-18 94.7 129 44.2
Haze_00251 Corylus avellana HOM05D006088 ORTHO05D007281 5.6e-18 94.7 129 44.2
Ca_12778_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 2.1e-17 92.8 117 45.3
SMO266G0077 Selaginella moellendorffii HOM05D006088 ORTHO05D007281 2.8e-17 92.4 78 57.7
AagrBONN_evm.TU.Sc2ySwM_117.2926 Anthoceros agrestis HOM05D006088 ORTHO05D007281 4.0e-16 88.6 137 38.0
CDE11G0933 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 2.2e-14 82.8 65 61.5
Pp3c11_25950 Physcomitrium patens HOM05D006088 ORTHO05D007281 6.4e-14 81.3 142 36.6
Mapoly0133s0016 Marchantia polymorpha HOM05D006088 ORTHO05D007281 1.4e-13 80.1 137 38.0
Nitab4.5_0005326g0020 Nicotiana tabacum HOM05D006088 ORTHO05D007281 1.2e-12 77.0 135 39.3
Lsat_1_v5_gn_2_135240 Lactuca sativa HOM05D006088 ORTHO05D007281 3.5e-12 75.5 120 44.2
TWI14G0770 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 7.9e-12 74.3 70 57.1
CDE02G1851 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 6.2e-09 64.7 115 36.5
Lsat_1_v5_gn_7_72820 Lactuca sativa HOM05D006088 ORTHO05D007281 4.0e-08 62.0 90 40.0
CBR_g51519 Chara braunii HOM05D000019 ORTHO05D000353 5.3e-08 61.6 78 44.9
BraA02t09006Z Brassica rapa HOM05D006088 ORTHO05D007281 5.8e-07 58.2 28 100.0


User provided reference genes

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